RNA–Protein interactions for RNA: ENST00000538202.3

AC005906.2-220, humanhuman

TSL 2

Gene AC005906.2, Length 1,034 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005906.2-220ENST00000538202 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
AC005906.2-220ENST00000538202 CHIC1Q5VXU3 224 aa20.17■□□□□ 0.82
AC005906.2-220ENST00000538202 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
AC005906.2-220ENST00000538202 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
AC005906.2-220ENST00000538202 FOXD1Q16676 465 aa17.04■□□□□ 0.32
AC005906.2-220ENST00000538202 NISCHQ9Y2I1 1504 aa16.83■□□□□ 0.28
AC005906.2-220ENST00000538202 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
AC005906.2-220ENST00000538202 MSH5O43196 834 aa15.97■□□□□ 0.15
AC005906.2-220ENST00000538202 PIAS4Q8N2W9 510 aaPredicted RBP15.95■□□□□ 0.14
AC005906.2-220ENST00000538202 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
AC005906.2-220ENST00000538202 ADRA2BP18089 450 aa15.84■□□□□ 0.13
AC005906.2-220ENST00000538202 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
AC005906.2-220ENST00000538202 CCDC180Q9P1Z9 1646 aa14.87□□□□□ -0.03
AC005906.2-220ENST00000538202 MAPK8IP2Q13387 824 aaPredicted RBP14.59□□□□□ -0.07
AC005906.2-220ENST00000538202 SCAF1Q9H7N4 1312 aaKnown RBP14.45□□□□□ -0.1
AC005906.2-220ENST00000538202 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
AC005906.2-220ENST00000538202 ABCC9O60706 1549 aa14.31□□□□□ -0.12
AC005906.2-220ENST00000538202 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
AC005906.2-220ENST00000538202 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
AC005906.2-220ENST00000538202 DCAF8L1A6NGE4 600 aa14.03□□□□□ -0.16
AC005906.2-220ENST00000538202 MYO15BQ96JP2 1530 aa14.03□□□□□ -0.16
AC005906.2-220ENST00000538202 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
AC005906.2-220ENST00000538202 NACADO15069 1562 aa13.98□□□□□ -0.17
AC005906.2-220ENST00000538202 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
AC005906.2-220ENST00000538202 DCAF8L2P0C7V8 631 aa13.91□□□□□ -0.18
AC005906.2-220ENST00000538202 CACNB1Q02641 598 aaPredicted RBP13.86□□□□□ -0.19
AC005906.2-220ENST00000538202 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
AC005906.2-220ENST00000538202 HOXD11P31277 338 aaPredicted RBP13.83□□□□□ -0.2
AC005906.2-220ENST00000538202 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
AC005906.2-220ENST00000538202 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
AC005906.2-220ENST00000538202 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
AC005906.2-220ENST00000538202 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
AC005906.2-220ENST00000538202 UNC13AQ9UPW8 1703 aa13.48□□□□□ -0.25
AC005906.2-220ENST00000538202 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
AC005906.2-220ENST00000538202 BICRAQ9NZM4 1560 aa13.44□□□□□ -0.26
AC005906.2-220ENST00000538202 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
AC005906.2-220ENST00000538202 C1QBPQ07021 282 aaKnown RBP13.39□□□□□ -0.27
AC005906.2-220ENST00000538202 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
AC005906.2-220ENST00000538202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.31□□□□□ -0.28
AC005906.2-220ENST00000538202 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
AC005906.2-220ENST00000538202 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
AC005906.2-220ENST00000538202 BAZ1AQ9NRL2 1556 aaPredicted RBP13.04□□□□□ -0.32
AC005906.2-220ENST00000538202 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
AC005906.2-220ENST00000538202 KCNA4P22459 653 aa13□□□□□ -0.33
AC005906.2-220ENST00000538202 SMARCA4P51532 1647 aa12.98□□□□□ -0.33
AC005906.2-220ENST00000538202 CC2D2AQ9P2K1 1620 aa12.96□□□□□ -0.33
AC005906.2-220ENST00000538202 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
AC005906.2-220ENST00000538202 MROH2BQ7Z745 1585 aa12.93□□□□□ -0.34
AC005906.2-220ENST00000538202 PEG3Q9GZU2 1588 aa12.92□□□□□ -0.34
AC005906.2-220ENST00000538202 NCAPD3P42695 1498 aa12.91□□□□□ -0.34
AC005906.2-220ENST00000538202 SMARCA2P51531 1590 aa12.91□□□□□ -0.34
AC005906.2-220ENST00000538202 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
AC005906.2-220ENST00000538202 RSF1Q96T23 1441 aaPredicted RBP12.89□□□□□ -0.35
AC005906.2-220ENST00000538202 CAPN15O75808 1086 aa12.87□□□□□ -0.35
AC005906.2-220ENST00000538202 SPINK5Q9NQ38 1064 aaPredicted RBP12.84□□□□□ -0.35
AC005906.2-220ENST00000538202 HMGXB3Q12766 1538 aa12.83□□□□□ -0.35
AC005906.2-220ENST00000538202 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
AC005906.2-220ENST00000538202 WIZO95785 1651 aa12.75□□□□□ -0.37
AC005906.2-220ENST00000538202 SLC4A2P04920 1241 aa12.74□□□□□ -0.37
AC005906.2-220ENST00000538202 DSG3P32926 999 aa12.72□□□□□ -0.37
AC005906.2-220ENST00000538202 TOP2AP11388 1531 aaKnown RBP12.7□□□□□ -0.38
AC005906.2-220ENST00000538202 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
AC005906.2-220ENST00000538202 SUPT5HO00267 1087 aaKnown RBP12.64□□□□□ -0.39
AC005906.2-220ENST00000538202 APLP2Q06481 763 aa12.58□□□□□ -0.4
AC005906.2-220ENST00000538202 ABCB7O75027 752 aa12.57□□□□□ -0.4
AC005906.2-220ENST00000538202 CCDC88BA6NC98 1476 aa12.54□□□□□ -0.4
AC005906.2-220ENST00000538202 CADPSQ9ULU8 1353 aa12.54□□□□□ -0.4
AC005906.2-220ENST00000538202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
AC005906.2-220ENST00000538202 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
AC005906.2-220ENST00000538202 ZNF219Q9P2Y4 722 aaPredicted RBP12.53□□□□□ -0.4
AC005906.2-220ENST00000538202 LAMC3Q9Y6N6 1575 aa12.51□□□□□ -0.41
AC005906.2-220ENST00000538202 CFTRP13569 1480 aa12.5□□□□□ -0.41
AC005906.2-220ENST00000538202 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
AC005906.2-220ENST00000538202 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
AC005906.2-220ENST00000538202 NESP48681 1621 aa12.42□□□□□ -0.42
AC005906.2-220ENST00000538202 POTEHQ6S545 545 aa12.38□□□□□ -0.43
AC005906.2-220ENST00000538202 ERCC6Q03468 1493 aa12.34□□□□□ -0.43
AC005906.2-220ENST00000538202 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
AC005906.2-220ENST00000538202 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
AC005906.2-220ENST00000538202 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
AC005906.2-220ENST00000538202 CEP164Q9UPV0 1460 aa12.32□□□□□ -0.44
AC005906.2-220ENST00000538202 SLC4A1APQ9BWU0 796 aaKnown RBP12.27□□□□□ -0.45
AC005906.2-220ENST00000538202 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.45
AC005906.2-220ENST00000538202 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
AC005906.2-220ENST00000538202 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
AC005906.2-220ENST00000538202 POLA2Q14181 598 aa12.23□□□□□ -0.45
AC005906.2-220ENST00000538202 WDR62O43379 1518 aa12.21□□□□□ -0.45
AC005906.2-220ENST00000538202 CUX2O14529 1486 aa12.21□□□□□ -0.45
AC005906.2-220ENST00000538202 THOC2Q8NI27 1593 aaKnown RBP12.21□□□□□ -0.46
AC005906.2-220ENST00000538202 URB2Q14146 1524 aaKnown RBP12.18□□□□□ -0.46
AC005906.2-220ENST00000538202 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
AC005906.2-220ENST00000538202 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
AC005906.2-220ENST00000538202 WRNQ14191 1432 aaPredicted RBP eCLIP12.15□□□□□ -0.46
AC005906.2-220ENST00000538202 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
AC005906.2-220ENST00000538202 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
AC005906.2-220ENST00000538202 CUX1P39880 1505 aa12.11□□□□□ -0.47
AC005906.2-220ENST00000538202 TOP2BQ02880 1626 aa12.09□□□□□ -0.47
AC005906.2-220ENST00000538202 IFT140Q96RY7 1462 aa12.08□□□□□ -0.47
AC005906.2-220ENST00000538202 ATF5Q9Y2D1 282 aaPredicted RBP12.08□□□□□ -0.48
AC005906.2-220ENST00000538202 BIVM-ERCC5R4GMW8 1640 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms