RNA–Protein interactions for RNA: ENST00000535715.5

OTUB1-206, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,391 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-206ENST00000535715 NISCHQ9Y2I1 1504 aa38.74■■■■□ 3.79
OTUB1-206ENST00000535715 CCDC180Q9P1Z9 1646 aa34.46■■■■□ 3.11
OTUB1-206ENST00000535715 ABCC9O60706 1549 aa33.84■■■■□ 3.01
OTUB1-206ENST00000535715 RB1CC1Q8TDY2 1594 aa32.5■■■□□ 2.79
OTUB1-206ENST00000535715 DCAF8L2P0C7V8 631 aa32.45■■■□□ 2.79
OTUB1-206ENST00000535715 NACADO15069 1562 aa32.44■■■□□ 2.78
OTUB1-206ENST00000535715 ZCCHC6Q5VYS8 1495 aaKnown RBP32.24■■■□□ 2.75
OTUB1-206ENST00000535715 MYO15BQ96JP2 1530 aa32.2■■■□□ 2.75
OTUB1-206ENST00000535715 DCAF1Q9Y4B6 1507 aa32.03■■■□□ 2.72
OTUB1-206ENST00000535715 UNC13AQ9UPW8 1703 aa31.74■■■□□ 2.67
OTUB1-206ENST00000535715 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.658e-7■■■■□ 25.6
OTUB1-206ENST00000535715 BICRAQ9NZM4 1560 aa31.5■■■□□ 2.63
OTUB1-206ENST00000535715 SCRIBQ14160 1630 aa31.45■■■□□ 2.63
OTUB1-206ENST00000535715 SHROOM4Q9ULL8 1493 aa31.16■■■□□ 2.58
OTUB1-206ENST00000535715 DNAJC5BQ9UF47 199 aa31.14■■■□□ 2.58
OTUB1-206ENST00000535715 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
OTUB1-206ENST00000535715 CC2D2AQ9P2K1 1620 aa30.59■■■□□ 2.49
OTUB1-206ENST00000535715 CECR2Q9BXF3 1484 aa30.41■■■□□ 2.46
OTUB1-206ENST00000535715 SMARCA4P51532 1647 aa30.07■■■□□ 2.4
OTUB1-206ENST00000535715 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
OTUB1-206ENST00000535715 NCAPD3P42695 1498 aa29.94■■■□□ 2.38
OTUB1-206ENST00000535715 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
OTUB1-206ENST00000535715 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
OTUB1-206ENST00000535715 MROH2BQ7Z745 1585 aa29.85■■■□□ 2.37
OTUB1-206ENST00000535715 PEG3Q9GZU2 1588 aa29.77■■■□□ 2.36
OTUB1-206ENST00000535715 HMGXB3Q12766 1538 aa29.77■■■□□ 2.36
OTUB1-206ENST00000535715 BAZ1BQ9UIG0 1483 aaKnown RBP29.69■■■□□ 2.34
OTUB1-206ENST00000535715 WIZO95785 1651 aa29.53■■■□□ 2.32
OTUB1-206ENST00000535715 RSF1Q96T23 1441 aaPredicted RBP29.48■■■□□ 2.31
OTUB1-206ENST00000535715 NESP48681 1621 aa29.25■■■□□ 2.27
OTUB1-206ENST00000535715 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.27
OTUB1-206ENST00000535715 ERCC6Q03468 1493 aa29.18■■■□□ 2.26
OTUB1-206ENST00000535715 LAMC3Q9Y6N6 1575 aa29.16■■■□□ 2.26
OTUB1-206ENST00000535715 CADPSQ9ULU8 1353 aa29.07■■■□□ 2.24
OTUB1-206ENST00000535715 PDS5BQ9NTI5 1447 aa28.99■■■□□ 2.23
OTUB1-206ENST00000535715 CUX2O14529 1486 aa28.89■■■□□ 2.21
OTUB1-206ENST00000535715 KIF21AQ7Z4S6 1674 aa28.88■■■□□ 2.21
OTUB1-206ENST00000535715 CCDC88BA6NC98 1476 aa28.87■■■□□ 2.21
OTUB1-206ENST00000535715 CFTRP13569 1480 aa28.87■■■□□ 2.21
OTUB1-206ENST00000535715 THOC2Q8NI27 1593 aaKnown RBP28.8■■■□□ 2.2
OTUB1-206ENST00000535715 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
OTUB1-206ENST00000535715 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
OTUB1-206ENST00000535715 CEP164Q9UPV0 1460 aa28.7■■■□□ 2.19
OTUB1-206ENST00000535715 MRC2Q9UBG0 1479 aa28.68■■■□□ 2.18
OTUB1-206ENST00000535715 PRDM2Q13029 1718 aa28.62■■■□□ 2.17
OTUB1-206ENST00000535715 WDR62O43379 1518 aa28.58■■■□□ 2.17
OTUB1-206ENST00000535715 URB2Q14146 1524 aaKnown RBP28.44■■■□□ 2.14
OTUB1-206ENST00000535715 ABCC8Q09428 1581 aa28.26■■■□□ 2.11
OTUB1-206ENST00000535715 TOPBP1Q92547 1522 aa28.26■■■□□ 2.11
OTUB1-206ENST00000535715 DNMBPQ6XZF7 1577 aa28.22■■■□□ 2.11
OTUB1-206ENST00000535715 DNAJC5Q9H3Z4 198 aa28.13■■■□□ 2.09
OTUB1-206ENST00000535715 IFT140Q96RY7 1462 aa28.11■■■□□ 2.09
OTUB1-206ENST00000535715 POLA1P09884 1462 aaPredicted RBP28.01■■■□□ 2.08
OTUB1-206ENST00000535715 CUX1P39880 1505 aa28■■■□□ 2.07
OTUB1-206ENST00000535715 ZNF608Q9ULD9 1512 aaPredicted RBP27.99■■■□□ 2.07
OTUB1-206ENST00000535715 TARBP1Q13395 1621 aaKnown RBP27.95■■■□□ 2.06
OTUB1-206ENST00000535715 FGD5Q6ZNL6 1462 aa27.93■■■□□ 2.06
OTUB1-206ENST00000535715 SOGA1O94964 1423 aa27.92■■■□□ 2.06
OTUB1-206ENST00000535715 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
OTUB1-206ENST00000535715 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
OTUB1-206ENST00000535715 AQRO60306 1485 aaKnown RBP eCLIP27.82■■■□□ 2.043e-10■■■■■ 44.3
OTUB1-206ENST00000535715 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
OTUB1-206ENST00000535715 TDRD9Q8NDG6 1382 aaKnown RBP27.77■■■□□ 2.04
OTUB1-206ENST00000535715 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
OTUB1-206ENST00000535715 BIVM-ERCC5R4GMW8 1640 aa27.73■■■□□ 2.03
OTUB1-206ENST00000535715 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
OTUB1-206ENST00000535715 WDR97A6NE52 1622 aa27.72■■■□□ 2.03
OTUB1-206ENST00000535715 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
OTUB1-206ENST00000535715 ABCA10Q8WWZ4 1543 aa27.66■■■□□ 2.02
OTUB1-206ENST00000535715 GRIN2BQ13224 1484 aa27.59■■■□□ 2.01
OTUB1-206ENST00000535715 GAPVD1Q14C86 1478 aa27.58■■■□□ 2.01
OTUB1-206ENST00000535715 SNAPC4Q5SXM2 1469 aa27.56■■■□□ 2
OTUB1-206ENST00000535715 FBLN2P98095 1184 aa27.54■■■□□ 2
OTUB1-206ENST00000535715 ABCA5Q8WWZ7 1642 aa27.54■■■□□ 2
OTUB1-206ENST00000535715 CHD1O14646 1710 aa27.52■■■□□ 2
OTUB1-206ENST00000535715 MAGI1Q96QZ7 1491 aaPredicted RBP27.52■■■□□ 2
OTUB1-206ENST00000535715 PBRM1Q86U86 1689 aa27.51■■□□□ 1.99
OTUB1-206ENST00000535715 CHMP7Q8WUX9 453 aaPredicted RBP27.45■■□□□ 1.98
OTUB1-206ENST00000535715 SYNJ2O15056 1496 aa27.42■■□□□ 1.98
OTUB1-206ENST00000535715 ERICH3Q5RHP9 1530 aa27.32■■□□□ 1.96
OTUB1-206ENST00000535715 ADAMTS12P58397 1594 aa27.29■■□□□ 1.96
OTUB1-206ENST00000535715 FHAD1B1AJZ9 1412 aa27.26■■□□□ 1.95
OTUB1-206ENST00000535715 RIMBP3CA6NJZ7 1639 aa27.24■■□□□ 1.95
OTUB1-206ENST00000535715 RIMBP3BA6NNM3 1639 aa27.24■■□□□ 1.95
OTUB1-206ENST00000535715 RIMBP3Q9UFD9 1639 aa27.24■■□□□ 1.95
OTUB1-206ENST00000535715 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
OTUB1-206ENST00000535715 ARHGEF11O15085 1522 aa27.23■■□□□ 1.95
OTUB1-206ENST00000535715 GRIN2AQ12879 1464 aa27.23■■□□□ 1.95
OTUB1-206ENST00000535715 CLASP1Q7Z460 1538 aa27.23■■□□□ 1.95
OTUB1-206ENST00000535715 TRIM41Q8WV44 630 aa27.18■■□□□ 1.94
OTUB1-206ENST00000535715 IGF1RP08069 1367 aa27.15■■□□□ 1.94
OTUB1-206ENST00000535715 NUP160Q12769 1436 aa27.11■■□□□ 1.93
OTUB1-206ENST00000535715 CEP170Q5SW79 1584 aa27.09■■□□□ 1.93
OTUB1-206ENST00000535715 CUL7Q14999 1698 aa27.05■■□□□ 1.92
OTUB1-206ENST00000535715 CYB5RLQ6IPT4 315 aa27.02■■□□□ 1.92
OTUB1-206ENST00000535715 ARAP1Q96P48 1450 aa27■■□□□ 1.91
OTUB1-206ENST00000535715 CARMIL1Q5VZK9 1371 aa26.98■■□□□ 1.91
OTUB1-206ENST00000535715 RUSC2Q8N2Y8 1516 aa26.96■■□□□ 1.91
OTUB1-206ENST00000535715 SHROOM2Q13796 1616 aa26.9■■□□□ 1.9
OTUB1-206ENST00000535715 JPH4Q96JJ6 628 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms