RNA–Protein interactions for RNA: ENST00000535715.5

OTUB1-206, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,391 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-206ENST00000535715 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.71□□□□□ -0.064e-62■■■■■ 36.2
OTUB1-206ENST00000535715 FMR1Q06787 632 aaKnown RBP eCLIP19.74■□□□□ 0.752e-22■■□□□ 13.5
OTUB1-206ENST00000535715 DDX3XO00571 662 aaKnown RBP eCLIP16.39■□□□□ 0.211e-11■■■■□ 22.1
OTUB1-206ENST00000535715 LARP4Q71RC2 724 aaKnown RBP eCLIP14.57□□□□□ -0.081e-10■■□□□ 12.3
OTUB1-206ENST00000535715 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.1■□□□□ 0.331e-10■■■□□ 18.4
OTUB1-206ENST00000535715 PCBP1Q15365 356 aaKnown RBP eCLIP17.65■□□□□ 0.422e-10■■■■□ 25.6
OTUB1-206ENST00000535715 AQRO60306 1485 aaKnown RBP eCLIP27.82■■■□□ 2.043e-10■■■■■ 44.3
OTUB1-206ENST00000535715 SF3A3Q12874 501 aaKnown RBP eCLIP14.27□□□□□ -0.126e-10■■■□□ 14.8
OTUB1-206ENST00000535715 SF3B4Q15427 424 aaKnown RBP eCLIP14.45□□□□□ -0.14e-9■■■■■ 51.9
OTUB1-206ENST00000535715 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.32■□□□□ 0.364e-9■■■■■ 37.2
OTUB1-206ENST00000535715 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.06■□□□□ 0.482e-8■□□□□ 9.5
OTUB1-206ENST00000535715 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.36■□□□□ 0.692e-8■■■□□ 18.3
OTUB1-206ENST00000535715 NCBP2P52298 156 aaKnown RBP eCLIP14.66□□□□□ -0.062e-8■□□□□ 9.5
OTUB1-206ENST00000535715 PABPC4Q13310 644 aaKnown RBP eCLIP19.03■□□□□ 0.645e-8■■■■□ 19.6
OTUB1-206ENST00000535715 SRSF1Q07955 248 aaKnown RBP eCLIP14.73□□□□□ -0.058e-8■□□□□ 11.3
OTUB1-206ENST00000535715 RBFOX2O43251 390 aaKnown RBP eCLIP12.35□□□□□ -0.439e-8■■□□□ 14.4
OTUB1-206ENST00000535715 UPF1Q92900 1129 aaKnown RBP eCLIP22.09■■□□□ 1.139e-8■■■□□ 18.2
OTUB1-206ENST00000535715 DDX6P26196 483 aaKnown RBP eCLIP16.9■□□□□ 0.31e-7■■□□□ 14.2
OTUB1-206ENST00000535715 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.97■□□□□ 0.311e-7■■■■■ 54.3
OTUB1-206ENST00000535715 PCBP2Q15366 365 aaKnown RBP eCLIP15.02■□□□□ -02e-7■■□□□ 13.3
OTUB1-206ENST00000535715 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.6■□□□□ 0.093e-7■□□□□ 8.4
OTUB1-206ENST00000535715 EFTUD2Q15029 972 aaKnown RBP eCLIP15.2■□□□□ 0.023e-7■■■□□ 15.2
OTUB1-206ENST00000535715 ZNF622Q969S3 477 aaKnown RBP eCLIP20.53■□□□□ 0.883e-7■□□□□ 11.3
OTUB1-206ENST00000535715 G3BP1Q13283 466 aaKnown RBP eCLIP19.71■□□□□ 0.754e-7■■□□□ 14.4
OTUB1-206ENST00000535715 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.87□□□□□ -0.034e-7■□□□□ 11.3
OTUB1-206ENST00000535715 NONOQ15233 471 aaKnown RBP eCLIP18.06■□□□□ 0.485e-7■■■■□ 24.5
OTUB1-206ENST00000535715 PTBP1P26599 531 aaKnown RBP eCLIP12.24□□□□□ -0.456e-7■□□□□ 9.8
OTUB1-206ENST00000535715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.27■■□□□ 1.487e-7■□□□□ 11.3
OTUB1-206ENST00000535715 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.658e-7■■■■□ 25.6
OTUB1-206ENST00000535715 PPIGQ13427 754 aaKnown RBP eCLIP18.11■□□□□ 0.499e-7■■■□□ 14.8
OTUB1-206ENST00000535715 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.42□□□□□ -0.261e-6■□□□□ 10.6
OTUB1-206ENST00000535715 NIPBLQ6KC79 2804 aaeCLIP13.44□□□□□ -0.261e-6■□□□□ 11.1
OTUB1-206ENST00000535715 U2AF2P26368 475 aaKnown RBP eCLIP17.87■□□□□ 0.452e-6■□□□□ 10.6
OTUB1-206ENST00000535715 RPS3P23396 243 aaKnown RBP eCLIP15.49■□□□□ 0.072e-6■■■■□ 19.8
OTUB1-206ENST00000535715 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.58■□□□□ 0.42e-6■■■□□ 17
OTUB1-206ENST00000535715 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.65□□□□□ -0.063e-6■■■□□ 15.4
OTUB1-206ENST00000535715 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.4■□□□□ 0.223e-6■□□□□ 9.5
OTUB1-206ENST00000535715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.36■■□□□ 1.494e-6■■■■■ 30.2
OTUB1-206ENST00000535715 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.28■□□□□ 0.685e-6■■□□□ 11.5
OTUB1-206ENST00000535715 GTF2F1P35269 517 aaKnown RBP eCLIP17.45■□□□□ 0.385e-6■■■■□ 24.4
OTUB1-206ENST00000535715 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.77□□□□□ -0.048e-6■■■□□ 14.7
OTUB1-206ENST00000535715 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.68■□□□□ 0.581e-5■■■□□ 18
Retrieved 42 of 42 RNA–protein pairs in 5.7 ms