RNA–Protein interactions for RNA: ENST00000535326.1

PRPF19-202, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 5

Gene PRPF19, Length 779 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-202ENST00000535326 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
PRPF19-202ENST00000535326 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
PRPF19-202ENST00000535326 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
PRPF19-202ENST00000535326 ABCC9O60706 1549 aa24.05■■□□□ 1.44
PRPF19-202ENST00000535326 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
PRPF19-202ENST00000535326 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
PRPF19-202ENST00000535326 SHROOM4Q9ULL8 1493 aa23.48■■□□□ 1.35
PRPF19-202ENST00000535326 MYO15BQ96JP2 1530 aa23.31■■□□□ 1.32
PRPF19-202ENST00000535326 NACADO15069 1562 aa23.28■■□□□ 1.32
PRPF19-202ENST00000535326 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
PRPF19-202ENST00000535326 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
PRPF19-202ENST00000535326 UNC13AQ9UPW8 1703 aa22.8■■□□□ 1.24
PRPF19-202ENST00000535326 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
PRPF19-202ENST00000535326 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
PRPF19-202ENST00000535326 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
PRPF19-202ENST00000535326 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
PRPF19-202ENST00000535326 CECR2Q9BXF3 1484 aa22.14■■□□□ 1.13
PRPF19-202ENST00000535326 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
PRPF19-202ENST00000535326 MROH2BQ7Z745 1585 aa22.08■■□□□ 1.12
PRPF19-202ENST00000535326 DNAJC5BQ9UF47 199 aa22■■□□□ 1.11
PRPF19-202ENST00000535326 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
PRPF19-202ENST00000535326 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
PRPF19-202ENST00000535326 WIZO95785 1651 aa21.94■■□□□ 1.1
PRPF19-202ENST00000535326 CC2D2AQ9P2K1 1620 aa21.83■■□□□ 1.08
PRPF19-202ENST00000535326 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
PRPF19-202ENST00000535326 TOP2AP11388 1531 aaKnown RBP21.76■■□□□ 1.07
PRPF19-202ENST00000535326 PEG3Q9GZU2 1588 aa21.67■■□□□ 1.06
PRPF19-202ENST00000535326 SMARCA2P51531 1590 aa21.6■■□□□ 1.05
PRPF19-202ENST00000535326 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
PRPF19-202ENST00000535326 NCAPD3P42695 1498 aa21.49■■□□□ 1.03
PRPF19-202ENST00000535326 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
PRPF19-202ENST00000535326 CCDC88BA6NC98 1476 aa21.47■■□□□ 1.03
PRPF19-202ENST00000535326 HMGXB3Q12766 1538 aa21.41■■□□□ 1.02
PRPF19-202ENST00000535326 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
PRPF19-202ENST00000535326 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
PRPF19-202ENST00000535326 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
PRPF19-202ENST00000535326 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
PRPF19-202ENST00000535326 LOC105371045A0A1W2PR82 267 aa20.93■□□□□ 0.94
PRPF19-202ENST00000535326 PRDM2Q13029 1718 aa20.92■□□□□ 0.94
PRPF19-202ENST00000535326 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.94
PRPF19-202ENST00000535326 NESP48681 1621 aa20.89■□□□□ 0.93
PRPF19-202ENST00000535326 CFTRP13569 1480 aa20.88■□□□□ 0.93
PRPF19-202ENST00000535326 SYNJ1O43426 1573 aa20.87■□□□□ 0.93
PRPF19-202ENST00000535326 EEA1Q15075 1411 aa20.87■□□□□ 0.93
PRPF19-202ENST00000535326 CADPSQ9ULU8 1353 aa20.83■□□□□ 0.92
PRPF19-202ENST00000535326 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
PRPF19-202ENST00000535326 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
PRPF19-202ENST00000535326 SOGA1O94964 1423 aa20.71■□□□□ 0.91
PRPF19-202ENST00000535326 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
PRPF19-202ENST00000535326 PDS5BQ9NTI5 1447 aa20.68■□□□□ 0.9
PRPF19-202ENST00000535326 ERCC6Q03468 1493 aa20.67■□□□□ 0.9
PRPF19-202ENST00000535326 CUX1P39880 1505 aa20.65■□□□□ 0.9
PRPF19-202ENST00000535326 CSRNP3Q8WYN3 585 aa20.63■□□□□ 0.89
PRPF19-202ENST00000535326 EHMT2Q96KQ7 1210 aa20.63■□□□□ 0.89
PRPF19-202ENST00000535326 THOC2Q8NI27 1593 aaKnown RBP20.62■□□□□ 0.89
PRPF19-202ENST00000535326 RUSC2Q8N2Y8 1516 aa20.59■□□□□ 0.89
PRPF19-202ENST00000535326 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
PRPF19-202ENST00000535326 FANCD2Q9BXW9 1451 aa20.57■□□□□ 0.88
PRPF19-202ENST00000535326 KIF21BO75037 1637 aa20.56■□□□□ 0.88
PRPF19-202ENST00000535326 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
PRPF19-202ENST00000535326 CUX2O14529 1486 aa20.51■□□□□ 0.87
PRPF19-202ENST00000535326 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
PRPF19-202ENST00000535326 TNIKQ9UKE5 1360 aa20.48■□□□□ 0.87
PRPF19-202ENST00000535326 WDR62O43379 1518 aa20.48■□□□□ 0.87
PRPF19-202ENST00000535326 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
PRPF19-202ENST00000535326 KIF27Q86VH2 1401 aa20.46■□□□□ 0.87
PRPF19-202ENST00000535326 UBTFP17480 764 aaKnown RBP20.44■□□□□ 0.86
PRPF19-202ENST00000535326 FGD5Q6ZNL6 1462 aa20.42■□□□□ 0.86
PRPF19-202ENST00000535326 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
PRPF19-202ENST00000535326 URB2Q14146 1524 aaKnown RBP20.4■□□□□ 0.86
PRPF19-202ENST00000535326 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
PRPF19-202ENST00000535326 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
PRPF19-202ENST00000535326 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
PRPF19-202ENST00000535326 PRXQ9BXM0 1461 aa20.3■□□□□ 0.84
PRPF19-202ENST00000535326 TRIM26Q12899 539 aaPredicted RBP20.27■□□□□ 0.84
PRPF19-202ENST00000535326 PCGF6Q9BYE7 350 aa20.27■□□□□ 0.84
PRPF19-202ENST00000535326 POLA1P09884 1462 aaPredicted RBP20.26■□□□□ 0.83
PRPF19-202ENST00000535326 ABCA10Q8WWZ4 1543 aa20.24■□□□□ 0.83
PRPF19-202ENST00000535326 CLIP1P30622 1438 aa20.22■□□□□ 0.83
PRPF19-202ENST00000535326 WDR97A6NE52 1622 aa20.18■□□□□ 0.82
PRPF19-202ENST00000535326 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
PRPF19-202ENST00000535326 IGF1RP08069 1367 aa20.15■□□□□ 0.82
PRPF19-202ENST00000535326 CUL7Q14999 1698 aa20.13■□□□□ 0.81
PRPF19-202ENST00000535326 CARMIL1Q5VZK9 1371 aa20.12■□□□□ 0.81
PRPF19-202ENST00000535326 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
PRPF19-202ENST00000535326 TARBP1Q13395 1621 aaKnown RBP20.1■□□□□ 0.81
PRPF19-202ENST00000535326 ABCA5Q8WWZ7 1642 aa20.08■□□□□ 0.8
PRPF19-202ENST00000535326 VPS8Q8N3P4 1428 aa20.07■□□□□ 0.8
PRPF19-202ENST00000535326 RANGAP1P46060 587 aaPredicted RBP20.02■□□□□ 0.8
PRPF19-202ENST00000535326 GAPVD1Q14C86 1478 aa20.02■□□□□ 0.8
PRPF19-202ENST00000535326 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.79
PRPF19-202ENST00000535326 APLP2Q06481 763 aa19.97■□□□□ 0.79
PRPF19-202ENST00000535326 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
PRPF19-202ENST00000535326 EIF4G3O43432 1585 aaKnown RBP19.96■□□□□ 0.79
PRPF19-202ENST00000535326 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.79
PRPF19-202ENST00000535326 PBRM1Q86U86 1689 aa19.95■□□□□ 0.78
PRPF19-202ENST00000535326 ARAP1Q96P48 1450 aa19.95■□□□□ 0.78
PRPF19-202ENST00000535326 CTTNBP2Q8WZ74 1663 aa19.94■□□□□ 0.78
PRPF19-202ENST00000535326 ARHGAP35Q9NRY4 1499 aa19.9■□□□□ 0.78
PRPF19-202ENST00000535326 HRCP23327 699 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms