RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 NISCHQ9Y2I1 1504 aa43.87■■■■■ 4.61
CAPRIN1-217ENST00000534825 CCDC180Q9P1Z9 1646 aa38.96■■■■□ 3.83
CAPRIN1-217ENST00000534825 ABCC9O60706 1549 aa38.52■■■■□ 3.76
CAPRIN1-217ENST00000534825 RB1CC1Q8TDY2 1594 aa36.86■■■■□ 3.49
CAPRIN1-217ENST00000534825 DCAF8L2P0C7V8 631 aa36.85■■■■□ 3.49
CAPRIN1-217ENST00000534825 NACADO15069 1562 aa36.78■■■■□ 3.48
CAPRIN1-217ENST00000534825 MYO15BQ96JP2 1530 aa36.52■■■■□ 3.44
CAPRIN1-217ENST00000534825 ZCCHC6Q5VYS8 1495 aaKnown RBP36.45■■■■□ 3.43
CAPRIN1-217ENST00000534825 DCAF1Q9Y4B6 1507 aa36.26■■■■□ 3.4
CAPRIN1-217ENST00000534825 PABPN1Q86U42 306 aaKnown RBP eCLIP36.06■■■■□ 3.36
CAPRIN1-217ENST00000534825 UNC13AQ9UPW8 1703 aa35.96■■■■□ 3.35
CAPRIN1-217ENST00000534825 BICRAQ9NZM4 1560 aa35.82■■■■□ 3.32
CAPRIN1-217ENST00000534825 DNAJC5BQ9UF47 199 aa35.78■■■■□ 3.32
CAPRIN1-217ENST00000534825 SCRIBQ14160 1630 aa35.58■■■■□ 3.29
CAPRIN1-217ENST00000534825 SHROOM4Q9ULL8 1493 aa35.34■■■■□ 3.25
CAPRIN1-217ENST00000534825 EIF4G1Q04637 1599 aaKnown RBP34.87■■■■□ 3.17
CAPRIN1-217ENST00000534825 CC2D2AQ9P2K1 1620 aa34.78■■■■□ 3.16
CAPRIN1-217ENST00000534825 CECR2Q9BXF3 1484 aa34.64■■■■□ 3.14
CAPRIN1-217ENST00000534825 NCAPD3P42695 1498 aa34.04■■■■□ 3.04
CAPRIN1-217ENST00000534825 SMARCA4P51532 1647 aa34.03■■■■□ 3.04
CAPRIN1-217ENST00000534825 ATAD2BQ9ULI0 1458 aa34■■■■□ 3.03
CAPRIN1-217ENST00000534825 BAZ1AQ9NRL2 1556 aaPredicted RBP33.96■■■■□ 3.03
CAPRIN1-217ENST00000534825 SMARCA2P51531 1590 aa33.85■■■■□ 3.01
CAPRIN1-217ENST00000534825 MROH2BQ7Z745 1585 aa33.82■■■■□ 3
CAPRIN1-217ENST00000534825 HMGXB3Q12766 1538 aa33.74■■■□□ 2.99
CAPRIN1-217ENST00000534825 PEG3Q9GZU2 1588 aa33.72■■■□□ 2.99
CAPRIN1-217ENST00000534825 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
CAPRIN1-217ENST00000534825 WIZO95785 1651 aa33.39■■■□□ 2.94
CAPRIN1-217ENST00000534825 RSF1Q96T23 1441 aaPredicted RBP33.38■■■□□ 2.93
CAPRIN1-217ENST00000534825 NESP48681 1621 aa33.28■■■□□ 2.92
CAPRIN1-217ENST00000534825 ERCC6Q03468 1493 aa33.16■■■□□ 2.9
CAPRIN1-217ENST00000534825 LAMC3Q9Y6N6 1575 aa33.07■■■□□ 2.88
CAPRIN1-217ENST00000534825 CADPSQ9ULU8 1353 aa33.05■■■□□ 2.88
CAPRIN1-217ENST00000534825 TOP2AP11388 1531 aaKnown RBP33■■■□□ 2.87
CAPRIN1-217ENST00000534825 PDS5BQ9NTI5 1447 aa32.93■■■□□ 2.86
CAPRIN1-217ENST00000534825 CUX2O14529 1486 aa32.92■■■□□ 2.86
CAPRIN1-217ENST00000534825 CFTRP13569 1480 aa32.77■■■□□ 2.84
CAPRIN1-217ENST00000534825 KIF21AQ7Z4S6 1674 aa32.73■■■□□ 2.83
CAPRIN1-217ENST00000534825 THOC2Q8NI27 1593 aaKnown RBP32.72■■■□□ 2.83
CAPRIN1-217ENST00000534825 CCDC88BA6NC98 1476 aa32.71■■■□□ 2.83
CAPRIN1-217ENST00000534825 FANCD2Q9BXW9 1451 aa32.6■■■□□ 2.81
CAPRIN1-217ENST00000534825 MRC2Q9UBG0 1479 aa32.56■■■□□ 2.8
CAPRIN1-217ENST00000534825 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
CAPRIN1-217ENST00000534825 WDR62O43379 1518 aa32.46■■■□□ 2.79
CAPRIN1-217ENST00000534825 SUPT5HO00267 1087 aaKnown RBP32.37■■■□□ 2.77
CAPRIN1-217ENST00000534825 DNAJC5Q9H3Z4 198 aa32.37■■■□□ 2.77
CAPRIN1-217ENST00000534825 URB2Q14146 1524 aaKnown RBP32.3■■■□□ 2.76
CAPRIN1-217ENST00000534825 PRDM2Q13029 1718 aa32.26■■■□□ 2.76
CAPRIN1-217ENST00000534825 TOPBP1Q92547 1522 aa32.05■■■□□ 2.72
CAPRIN1-217ENST00000534825 ABCC8Q09428 1581 aa32.02■■■□□ 2.72
CAPRIN1-217ENST00000534825 DNMBPQ6XZF7 1577 aa31.94■■■□□ 2.7
CAPRIN1-217ENST00000534825 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
CAPRIN1-217ENST00000534825 ZNF608Q9ULD9 1512 aaPredicted RBP31.83■■■□□ 2.69
CAPRIN1-217ENST00000534825 POLA1P09884 1462 aaPredicted RBP31.77■■■□□ 2.68
CAPRIN1-217ENST00000534825 CUX1P39880 1505 aa31.72■■■□□ 2.67
CAPRIN1-217ENST00000534825 TARBP1Q13395 1621 aaKnown RBP31.7■■■□□ 2.66
CAPRIN1-217ENST00000534825 SOGA1O94964 1423 aa31.68■■■□□ 2.66
CAPRIN1-217ENST00000534825 RAD54L2Q9Y4B4 1467 aa31.67■■■□□ 2.66
CAPRIN1-217ENST00000534825 AQRO60306 1485 aaKnown RBP eCLIP31.65■■■□□ 2.668e-9■□□□□ 9.6
CAPRIN1-217ENST00000534825 OSCARQ8IYS5 282 aa31.64■■■□□ 2.66
CAPRIN1-217ENST00000534825 FGD5Q6ZNL6 1462 aa31.64■■■□□ 2.66
CAPRIN1-217ENST00000534825 EIF4G3O43432 1585 aaKnown RBP31.56■■■□□ 2.64
CAPRIN1-217ENST00000534825 TDRD9Q8NDG6 1382 aaKnown RBP31.56■■■□□ 2.64
CAPRIN1-217ENST00000534825 WRNQ14191 1432 aaPredicted RBP eCLIP31.43■■■□□ 2.62
CAPRIN1-217ENST00000534825 WDR97A6NE52 1622 aa31.35■■■□□ 2.61
CAPRIN1-217ENST00000534825 ABCA10Q8WWZ4 1543 aa31.34■■■□□ 2.61
CAPRIN1-217ENST00000534825 TOP2BQ02880 1626 aa31.33■■■□□ 2.61
CAPRIN1-217ENST00000534825 SYNJ1O43426 1573 aa31.32■■■□□ 2.6
CAPRIN1-217ENST00000534825 FBLN2P98095 1184 aa31.31■■■□□ 2.6
CAPRIN1-217ENST00000534825 BIVM-ERCC5R4GMW8 1640 aa31.29■■■□□ 2.6
CAPRIN1-217ENST00000534825 GRIN2BQ13224 1484 aa31.28■■■□□ 2.6
CAPRIN1-217ENST00000534825 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
CAPRIN1-217ENST00000534825 SNAPC4Q5SXM2 1469 aa31.27■■■□□ 2.6
CAPRIN1-217ENST00000534825 MAGI1Q96QZ7 1491 aaPredicted RBP31.21■■■□□ 2.59
CAPRIN1-217ENST00000534825 CHMP7Q8WUX9 453 aaPredicted RBP31.19■■■□□ 2.58
CAPRIN1-217ENST00000534825 CHD1O14646 1710 aa31.18■■■□□ 2.58
CAPRIN1-217ENST00000534825 ABCA5Q8WWZ7 1642 aa31.16■■■□□ 2.58
CAPRIN1-217ENST00000534825 TRIM41Q8WV44 630 aa31.12■■■□□ 2.57
CAPRIN1-217ENST00000534825 SYNJ2O15056 1496 aa31.1■■■□□ 2.57
CAPRIN1-217ENST00000534825 PBRM1Q86U86 1689 aa31.06■■■□□ 2.56
CAPRIN1-217ENST00000534825 ARHGEF11O15085 1522 aa31.01■■■□□ 2.55
CAPRIN1-217ENST00000534825 RIMBP3CA6NJZ7 1639 aa31■■■□□ 2.55
CAPRIN1-217ENST00000534825 RIMBP3BA6NNM3 1639 aa31■■■□□ 2.55
CAPRIN1-217ENST00000534825 RIMBP3Q9UFD9 1639 aa31■■■□□ 2.55
CAPRIN1-217ENST00000534825 CLASP1Q7Z460 1538 aa30.93■■■□□ 2.54
CAPRIN1-217ENST00000534825 ERICH3Q5RHP9 1530 aa30.92■■■□□ 2.54
CAPRIN1-217ENST00000534825 FHAD1B1AJZ9 1412 aa30.9■■■□□ 2.54
CAPRIN1-217ENST00000534825 GRIN2AQ12879 1464 aa30.87■■■□□ 2.53
CAPRIN1-217ENST00000534825 ADAMTS12P58397 1594 aa30.87■■■□□ 2.53
CAPRIN1-217ENST00000534825 CYB5RLQ6IPT4 315 aa30.86■■■□□ 2.53
CAPRIN1-217ENST00000534825 IGF1RP08069 1367 aa30.8■■■□□ 2.52
CAPRIN1-217ENST00000534825 NUP160Q12769 1436 aa30.79■■■□□ 2.52
CAPRIN1-217ENST00000534825 KIF27Q86VH2 1401 aa30.79■■■□□ 2.52
CAPRIN1-217ENST00000534825 ARAP1Q96P48 1450 aa30.76■■■□□ 2.52
CAPRIN1-217ENST00000534825 CEP170Q5SW79 1584 aa30.71■■■□□ 2.51
CAPRIN1-217ENST00000534825 CARMIL1Q5VZK9 1371 aa30.57■■■□□ 2.48
CAPRIN1-217ENST00000534825 JPH4Q96JJ6 628 aa30.56■■■□□ 2.48
CAPRIN1-217ENST00000534825 ERCC6L2Q5T890 1561 aa30.53■■■□□ 2.48
CAPRIN1-217ENST00000534825 CUL7Q14999 1698 aa30.51■■■□□ 2.47
CAPRIN1-217ENST00000534825 RUSC2Q8N2Y8 1516 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms