RNA–Protein interactions for RNA: ENST00000533943.1

MRPL49-208, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 3

Gene MRPL49, Length 688 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-208ENST00000533943 NISCHQ9Y2I1 1504 aa39.55■■■■□ 3.92
MRPL49-208ENST00000533943 CCDC180Q9P1Z9 1646 aa35.2■■■■□ 3.23
MRPL49-208ENST00000533943 ABCC9O60706 1549 aa34.72■■■■□ 3.15
MRPL49-208ENST00000533943 RB1CC1Q8TDY2 1594 aa33.29■■■□□ 2.92
MRPL49-208ENST00000533943 NACADO15069 1562 aa33.21■■■□□ 2.91
MRPL49-208ENST00000533943 DCAF8L2P0C7V8 631 aa33.15■■■□□ 2.9
MRPL49-208ENST00000533943 MYO15BQ96JP2 1530 aa32.97■■■□□ 2.87
MRPL49-208ENST00000533943 ZCCHC6Q5VYS8 1495 aaKnown RBP32.88■■■□□ 2.85
MRPL49-208ENST00000533943 DCAF1Q9Y4B6 1507 aa32.72■■■□□ 2.83
MRPL49-208ENST00000533943 PABPN1Q86U42 306 aaKnown RBP eCLIP32.44■■■□□ 2.78
MRPL49-208ENST00000533943 UNC13AQ9UPW8 1703 aa32.41■■■□□ 2.78
MRPL49-208ENST00000533943 BICRAQ9NZM4 1560 aa32.28■■■□□ 2.76
MRPL49-208ENST00000533943 DNAJC5BQ9UF47 199 aa32.15■■■□□ 2.74
MRPL49-208ENST00000533943 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
MRPL49-208ENST00000533943 SHROOM4Q9ULL8 1493 aa31.97■■■□□ 2.71
MRPL49-208ENST00000533943 EIF4G1Q04637 1599 aaKnown RBP31.45■■■□□ 2.63
MRPL49-208ENST00000533943 CC2D2AQ9P2K1 1620 aa31.38■■■□□ 2.61
MRPL49-208ENST00000533943 CECR2Q9BXF3 1484 aa31.25■■■□□ 2.59
MRPL49-208ENST00000533943 NCAPD3P42695 1498 aa30.69■■■□□ 2.5
MRPL49-208ENST00000533943 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
MRPL49-208ENST00000533943 ATAD2BQ9ULI0 1458 aa30.65■■■□□ 2.5
MRPL49-208ENST00000533943 BAZ1AQ9NRL2 1556 aaPredicted RBP30.65■■■□□ 2.5
MRPL49-208ENST00000533943 SMARCA2P51531 1590 aa30.58■■■□□ 2.49
MRPL49-208ENST00000533943 HMGXB3Q12766 1538 aa30.47■■■□□ 2.47
MRPL49-208ENST00000533943 MROH2BQ7Z745 1585 aa30.45■■■□□ 2.47
MRPL49-208ENST00000533943 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
MRPL49-208ENST00000533943 BAZ1BQ9UIG0 1483 aaKnown RBP30.36■■■□□ 2.45
MRPL49-208ENST00000533943 WIZO95785 1651 aa30.06■■■□□ 2.4
MRPL49-208ENST00000533943 RSF1Q96T23 1441 aaPredicted RBP30.05■■■□□ 2.4
MRPL49-208ENST00000533943 NESP48681 1621 aa29.96■■■□□ 2.39
MRPL49-208ENST00000533943 ERCC6Q03468 1493 aa29.95■■■□□ 2.39
MRPL49-208ENST00000533943 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
MRPL49-208ENST00000533943 CADPSQ9ULU8 1353 aa29.78■■■□□ 2.36
MRPL49-208ENST00000533943 TOP2AP11388 1531 aaKnown RBP29.77■■■□□ 2.36
MRPL49-208ENST00000533943 CUX2O14529 1486 aa29.74■■■□□ 2.35
MRPL49-208ENST00000533943 PDS5BQ9NTI5 1447 aa29.72■■■□□ 2.35
MRPL49-208ENST00000533943 CFTRP13569 1480 aa29.55■■■□□ 2.32
MRPL49-208ENST00000533943 THOC2Q8NI27 1593 aaKnown RBP29.53■■■□□ 2.32
MRPL49-208ENST00000533943 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
MRPL49-208ENST00000533943 CCDC88BA6NC98 1476 aa29.46■■■□□ 2.31
MRPL49-208ENST00000533943 FANCD2Q9BXW9 1451 aa29.41■■■□□ 2.3
MRPL49-208ENST00000533943 MRC2Q9UBG0 1479 aa29.4■■■□□ 2.3
MRPL49-208ENST00000533943 CEP164Q9UPV0 1460 aa29.38■■■□□ 2.29
MRPL49-208ENST00000533943 WDR62O43379 1518 aa29.3■■■□□ 2.28
MRPL49-208ENST00000533943 DNAJC5Q9H3Z4 198 aa29.17■■■□□ 2.26
MRPL49-208ENST00000533943 PRDM2Q13029 1718 aa29.14■■■□□ 2.25
MRPL49-208ENST00000533943 URB2Q14146 1524 aaKnown RBP29.12■■■□□ 2.25
MRPL49-208ENST00000533943 SUPT5HO00267 1087 aaKnown RBP29.09■■■□□ 2.25
MRPL49-208ENST00000533943 ABCC8Q09428 1581 aa28.92■■■□□ 2.22
MRPL49-208ENST00000533943 TOPBP1Q92547 1522 aa28.9■■■□□ 2.22
MRPL49-208ENST00000533943 DNMBPQ6XZF7 1577 aa28.83■■■□□ 2.21
MRPL49-208ENST00000533943 IFT140Q96RY7 1462 aa28.8■■■□□ 2.2
MRPL49-208ENST00000533943 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
MRPL49-208ENST00000533943 POLA1P09884 1462 aaPredicted RBP28.65■■■□□ 2.18
MRPL49-208ENST00000533943 CUX1P39880 1505 aa28.59■■■□□ 2.17
MRPL49-208ENST00000533943 TARBP1Q13395 1621 aaKnown RBP28.58■■■□□ 2.17
MRPL49-208ENST00000533943 SOGA1O94964 1423 aa28.54■■■□□ 2.16
MRPL49-208ENST00000533943 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
MRPL49-208ENST00000533943 RAD54L2Q9Y4B4 1467 aa28.52■■■□□ 2.16
MRPL49-208ENST00000533943 OSCARQ8IYS5 282 aa28.51■■■□□ 2.15
MRPL49-208ENST00000533943 EIF4G3O43432 1585 aaKnown RBP28.5■■■□□ 2.15
MRPL49-208ENST00000533943 AQRO60306 1485 aaKnown RBP eCLIP28.49■■■□□ 2.15
MRPL49-208ENST00000533943 TDRD9Q8NDG6 1382 aaKnown RBP28.41■■■□□ 2.14
MRPL49-208ENST00000533943 WDR97A6NE52 1622 aa28.36■■■□□ 2.13
MRPL49-208ENST00000533943 WRNQ14191 1432 aaPredicted RBP eCLIP28.34■■■□□ 2.13
MRPL49-208ENST00000533943 ABCA10Q8WWZ4 1543 aa28.27■■■□□ 2.12
MRPL49-208ENST00000533943 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
MRPL49-208ENST00000533943 GRIN2BQ13224 1484 aa28.23■■■□□ 2.11
MRPL49-208ENST00000533943 BIVM-ERCC5R4GMW8 1640 aa28.22■■■□□ 2.11
MRPL49-208ENST00000533943 SYNJ1O43426 1573 aa28.22■■■□□ 2.11
MRPL49-208ENST00000533943 FBLN2P98095 1184 aa28.21■■■□□ 2.11
MRPL49-208ENST00000533943 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
MRPL49-208ENST00000533943 GAPVD1Q14C86 1478 aa28.2■■■□□ 2.1
MRPL49-208ENST00000533943 MAGI1Q96QZ7 1491 aaPredicted RBP28.18■■■□□ 2.1
MRPL49-208ENST00000533943 CHD1O14646 1710 aa28.13■■■□□ 2.09
MRPL49-208ENST00000533943 ABCA5Q8WWZ7 1642 aa28.12■■■□□ 2.09
MRPL49-208ENST00000533943 CHMP7Q8WUX9 453 aaPredicted RBP28.12■■■□□ 2.09
MRPL49-208ENST00000533943 SYNJ2O15056 1496 aa28.08■■■□□ 2.09
MRPL49-208ENST00000533943 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
MRPL49-208ENST00000533943 PBRM1Q86U86 1689 aa28.03■■■□□ 2.08
MRPL49-208ENST00000533943 ARHGEF11O15085 1522 aa27.98■■■□□ 2.07
MRPL49-208ENST00000533943 RIMBP3CA6NJZ7 1639 aa27.98■■■□□ 2.07
MRPL49-208ENST00000533943 RIMBP3BA6NNM3 1639 aa27.98■■■□□ 2.07
MRPL49-208ENST00000533943 RIMBP3Q9UFD9 1639 aa27.98■■■□□ 2.07
MRPL49-208ENST00000533943 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
MRPL49-208ENST00000533943 ERICH3Q5RHP9 1530 aa27.91■■■□□ 2.06
MRPL49-208ENST00000533943 FHAD1B1AJZ9 1412 aa27.88■■■□□ 2.05
MRPL49-208ENST00000533943 ADAMTS12P58397 1594 aa27.87■■■□□ 2.05
MRPL49-208ENST00000533943 GRIN2AQ12879 1464 aa27.85■■■□□ 2.05
MRPL49-208ENST00000533943 CYB5RLQ6IPT4 315 aa27.79■■■□□ 2.04
MRPL49-208ENST00000533943 KIF27Q86VH2 1401 aa27.77■■■□□ 2.04
MRPL49-208ENST00000533943 NUP160Q12769 1436 aa27.76■■■□□ 2.04
MRPL49-208ENST00000533943 ARAP1Q96P48 1450 aa27.76■■■□□ 2.03
MRPL49-208ENST00000533943 IGF1RP08069 1367 aa27.73■■■□□ 2.03
MRPL49-208ENST00000533943 CEP170Q5SW79 1584 aa27.69■■■□□ 2.02
MRPL49-208ENST00000533943 CUL7Q14999 1698 aa27.56■■■□□ 2
MRPL49-208ENST00000533943 CARMIL1Q5VZK9 1371 aa27.53■■■□□ 2
MRPL49-208ENST00000533943 SHROOM2Q13796 1616 aa27.52■■■□□ 2
MRPL49-208ENST00000533943 JPH4Q96JJ6 628 aa27.51■■□□□ 1.99
MRPL49-208ENST00000533943 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms