RNA–Protein interactions for RNA: ENST00000533873.1

ACER3-213, Transcript of alkaline ceramidase 3, humanhuman

TSL 2 BASIC

Gene ACER3, Length 929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-213ENST00000533873 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
ACER3-213ENST00000533873 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
ACER3-213ENST00000533873 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
ACER3-213ENST00000533873 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
ACER3-213ENST00000533873 FOXD1Q16676 465 aa16.9■□□□□ 0.3
ACER3-213ENST00000533873 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
ACER3-213ENST00000533873 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
ACER3-213ENST00000533873 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
ACER3-213ENST00000533873 ADRA2BP18089 450 aa16■□□□□ 0.15
ACER3-213ENST00000533873 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
ACER3-213ENST00000533873 MSH5O43196 834 aa15.68■□□□□ 0.1
ACER3-213ENST00000533873 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
ACER3-213ENST00000533873 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
ACER3-213ENST00000533873 ABCC9O60706 1549 aa14.68□□□□□ -0.06
ACER3-213ENST00000533873 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
ACER3-213ENST00000533873 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
ACER3-213ENST00000533873 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
ACER3-213ENST00000533873 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
ACER3-213ENST00000533873 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
ACER3-213ENST00000533873 RB1CC1Q8TDY2 1594 aa14.12□□□□□ -0.15
ACER3-213ENST00000533873 NACADO15069 1562 aa14.07□□□□□ -0.16
ACER3-213ENST00000533873 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
ACER3-213ENST00000533873 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.17
ACER3-213ENST00000533873 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
ACER3-213ENST00000533873 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
ACER3-213ENST00000533873 MYO15BQ96JP2 1530 aa13.96□□□□□ -0.17
ACER3-213ENST00000533873 ZCCHC6Q5VYS8 1495 aaKnown RBP13.92□□□□□ -0.18
ACER3-213ENST00000533873 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
ACER3-213ENST00000533873 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
ACER3-213ENST00000533873 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
ACER3-213ENST00000533873 KCNA4P22459 653 aa13.85□□□□□ -0.19
ACER3-213ENST00000533873 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
ACER3-213ENST00000533873 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
ACER3-213ENST00000533873 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
ACER3-213ENST00000533873 BICRAQ9NZM4 1560 aa13.6□□□□□ -0.23
ACER3-213ENST00000533873 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
ACER3-213ENST00000533873 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
ACER3-213ENST00000533873 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
ACER3-213ENST00000533873 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.37□□□□□ -0.27
ACER3-213ENST00000533873 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
ACER3-213ENST00000533873 EIF4G1Q04637 1599 aaKnown RBP13.3□□□□□ -0.28
ACER3-213ENST00000533873 CC2D2AQ9P2K1 1620 aa13.25□□□□□ -0.29
ACER3-213ENST00000533873 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
ACER3-213ENST00000533873 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
ACER3-213ENST00000533873 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
ACER3-213ENST00000533873 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
ACER3-213ENST00000533873 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
ACER3-213ENST00000533873 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
ACER3-213ENST00000533873 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
ACER3-213ENST00000533873 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
ACER3-213ENST00000533873 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
ACER3-213ENST00000533873 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
ACER3-213ENST00000533873 HMGXB3Q12766 1538 aa12.92□□□□□ -0.34
ACER3-213ENST00000533873 BAZ1BQ9UIG0 1483 aaKnown RBP12.88□□□□□ -0.35
ACER3-213ENST00000533873 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
ACER3-213ENST00000533873 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
ACER3-213ENST00000533873 MROH2BQ7Z745 1585 aa12.85□□□□□ -0.35
ACER3-213ENST00000533873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.81□□□□□ -0.36
ACER3-213ENST00000533873 CAPN15O75808 1086 aa12.81□□□□□ -0.36
ACER3-213ENST00000533873 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
ACER3-213ENST00000533873 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
ACER3-213ENST00000533873 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
ACER3-213ENST00000533873 SAMD1Q6SPF0 538 aaPredicted RBP12.76□□□□□ -0.37
ACER3-213ENST00000533873 ERCC6Q03468 1493 aa12.74□□□□□ -0.37
ACER3-213ENST00000533873 ZBTB22O15209 634 aa12.74□□□□□ -0.37
ACER3-213ENST00000533873 APLP2Q06481 763 aa12.74□□□□□ -0.37
ACER3-213ENST00000533873 RSF1Q96T23 1441 aaPredicted RBP12.69□□□□□ -0.38
ACER3-213ENST00000533873 WIZO95785 1651 aa12.68□□□□□ -0.38
ACER3-213ENST00000533873 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
ACER3-213ENST00000533873 DSG3P32926 999 aa12.67□□□□□ -0.38
ACER3-213ENST00000533873 LAMC3Q9Y6N6 1575 aa12.65□□□□□ -0.38
ACER3-213ENST00000533873 NESP48681 1621 aa12.64□□□□□ -0.39
ACER3-213ENST00000533873 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
ACER3-213ENST00000533873 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
ACER3-213ENST00000533873 CUX2O14529 1486 aa12.62□□□□□ -0.39
ACER3-213ENST00000533873 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
ACER3-213ENST00000533873 CADPSQ9ULU8 1353 aa12.59□□□□□ -0.39
ACER3-213ENST00000533873 ABCB7O75027 752 aa12.55□□□□□ -0.4
ACER3-213ENST00000533873 DNAJC5Q9H3Z4 198 aa12.51□□□□□ -0.41
ACER3-213ENST00000533873 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
ACER3-213ENST00000533873 THOC2Q8NI27 1593 aaKnown RBP12.49□□□□□ -0.41
ACER3-213ENST00000533873 CFTRP13569 1480 aa12.49□□□□□ -0.41
ACER3-213ENST00000533873 MRC2Q9UBG0 1479 aa12.47□□□□□ -0.41
ACER3-213ENST00000533873 CEP164Q9UPV0 1460 aa12.47□□□□□ -0.41
ACER3-213ENST00000533873 KIF21AQ7Z4S6 1674 aa12.47□□□□□ -0.41
ACER3-213ENST00000533873 FANCD2Q9BXW9 1451 aa12.46□□□□□ -0.42
ACER3-213ENST00000533873 CCDC88BA6NC98 1476 aa12.43□□□□□ -0.42
ACER3-213ENST00000533873 POLA2Q14181 598 aa12.41□□□□□ -0.42
ACER3-213ENST00000533873 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
ACER3-213ENST00000533873 WDR62O43379 1518 aa12.41□□□□□ -0.42
ACER3-213ENST00000533873 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
ACER3-213ENST00000533873 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
ACER3-213ENST00000533873 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
ACER3-213ENST00000533873 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
ACER3-213ENST00000533873 URB2Q14146 1524 aaKnown RBP12.3□□□□□ -0.44
ACER3-213ENST00000533873 ABCC8Q09428 1581 aa12.27□□□□□ -0.44
ACER3-213ENST00000533873 TOPBP1Q92547 1522 aa12.23□□□□□ -0.45
ACER3-213ENST00000533873 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
ACER3-213ENST00000533873 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
ACER3-213ENST00000533873 ZBTB12Q9Y330 459 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms