RNA–Protein interactions for RNA: ENST00000533670.1

AP003716.1-203, humanhuman

TSL 3 BASIC

Gene AP003716.1, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003716.1-203ENST00000533670 AEBP2Q6ZN18 517 aaPredicted RBP33.91■■■■□ 3.02
AP003716.1-203ENST00000533670 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.75
AP003716.1-203ENST00000533670 SENP3Q9H4L4 574 aaPredicted RBP29.1■■■□□ 2.25
AP003716.1-203ENST00000533670 PHF23Q9BUL5 403 aaPredicted RBP28.64■■■□□ 2.18
AP003716.1-203ENST00000533670 FOXD1Q16676 465 aa27.02■■□□□ 1.92
AP003716.1-203ENST00000533670 PLPPR3Q6T4P5 718 aa25.84■■□□□ 1.73
AP003716.1-203ENST00000533670 NISCHQ9Y2I1 1504 aa25.71■■□□□ 1.71
AP003716.1-203ENST00000533670 MSH5O43196 834 aa25.44■■□□□ 1.66
AP003716.1-203ENST00000533670 PIAS4Q8N2W9 510 aaPredicted RBP25.32■■□□□ 1.64
AP003716.1-203ENST00000533670 PPP6R1Q9UPN7 881 aa25.17■■□□□ 1.62
AP003716.1-203ENST00000533670 ADRA2BP18089 450 aa25.13■■□□□ 1.61
AP003716.1-203ENST00000533670 POTEDQ86YR6 584 aa24.77■■□□□ 1.56
AP003716.1-203ENST00000533670 SCAF1Q9H7N4 1312 aaKnown RBP23.19■■□□□ 1.3
AP003716.1-203ENST00000533670 MAPK8IP2Q13387 824 aaPredicted RBP23.05■■□□□ 1.28
AP003716.1-203ENST00000533670 DMRT2Q9Y5R5 561 aa23.02■■□□□ 1.28
AP003716.1-203ENST00000533670 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
AP003716.1-203ENST00000533670 PPP4R3CPQ6ZMV5 832 aa22.58■■□□□ 1.21
AP003716.1-203ENST00000533670 ABCC9O60706 1549 aa22.24■■□□□ 1.15
AP003716.1-203ENST00000533670 CNKSR2Q8WXI2 1034 aa22.22■■□□□ 1.15
AP003716.1-203ENST00000533670 HOXD11P31277 338 aaPredicted RBP22.15■■□□□ 1.14
AP003716.1-203ENST00000533670 DCAF8L1A6NGE4 600 aa22.14■■□□□ 1.13
AP003716.1-203ENST00000533670 RNF216Q9NWF9 866 aaPredicted RBP22.02■■□□□ 1.12
AP003716.1-203ENST00000533670 CACNB1Q02641 598 aaPredicted RBP21.83■■□□□ 1.09
AP003716.1-203ENST00000533670 NCBP3Q53F19 620 aaKnown RBP21.82■■□□□ 1.08
AP003716.1-203ENST00000533670 RNF39Q9H2S5 420 aa21.62■■□□□ 1.05
AP003716.1-203ENST00000533670 NACADO15069 1562 aa21.49■■□□□ 1.03
AP003716.1-203ENST00000533670 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
AP003716.1-203ENST00000533670 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
AP003716.1-203ENST00000533670 RB1CC1Q8TDY2 1594 aa21.47■■□□□ 1.03
AP003716.1-203ENST00000533670 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
AP003716.1-203ENST00000533670 DCAF8L2P0C7V8 631 aa21.38■■□□□ 1.01
AP003716.1-203ENST00000533670 C1QBPQ07021 282 aaKnown RBP21.37■■□□□ 1.01
AP003716.1-203ENST00000533670 DCAF1Q9Y4B6 1507 aa21.36■■□□□ 1.01
AP003716.1-203ENST00000533670 NPM3O75607 178 aaKnown RBP21.36■■□□□ 1.01
AP003716.1-203ENST00000533670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.18■□□□□ 0.98
AP003716.1-203ENST00000533670 KCNA4P22459 653 aa20.89■□□□□ 0.93
AP003716.1-203ENST00000533670 PABPN1Q86U42 306 aaKnown RBP eCLIP20.8■□□□□ 0.92
AP003716.1-203ENST00000533670 BICRAQ9NZM4 1560 aa20.77■□□□□ 0.92
AP003716.1-203ENST00000533670 UNC13AQ9UPW8 1703 aa20.76■□□□□ 0.91
AP003716.1-203ENST00000533670 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
AP003716.1-203ENST00000533670 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
AP003716.1-203ENST00000533670 EHMT2Q96KQ7 1210 aa20.69■□□□□ 0.9
AP003716.1-203ENST00000533670 U3KPZ7 1027 aaPredicted RBP20.63■□□□□ 0.89
AP003716.1-203ENST00000533670 CAPN15O75808 1086 aa20.4■□□□□ 0.86
AP003716.1-203ENST00000533670 SLC4A2P04920 1241 aa20.36■□□□□ 0.85
AP003716.1-203ENST00000533670 SPINK5Q9NQ38 1064 aaPredicted RBP20.32■□□□□ 0.84
AP003716.1-203ENST00000533670 APLP2Q06481 763 aa20.28■□□□□ 0.84
AP003716.1-203ENST00000533670 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
AP003716.1-203ENST00000533670 DSG3P32926 999 aa20.22■□□□□ 0.83
AP003716.1-203ENST00000533670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.21■□□□□ 0.83
AP003716.1-203ENST00000533670 HNRNPUL2Q1KMD3 747 aaKnown RBP20.21■□□□□ 0.83
AP003716.1-203ENST00000533670 CC2D2AQ9P2K1 1620 aa20.11■□□□□ 0.81
AP003716.1-203ENST00000533670 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
AP003716.1-203ENST00000533670 SAMD1Q6SPF0 538 aaPredicted RBP20.05■□□□□ 0.8
AP003716.1-203ENST00000533670 TRHP20396 242 aaPredicted RBP20.04■□□□□ 0.8
AP003716.1-203ENST00000533670 CECR2Q9BXF3 1484 aa20.04■□□□□ 0.8
AP003716.1-203ENST00000533670 SLC4A1APQ9BWU0 796 aaKnown RBP20■□□□□ 0.79
AP003716.1-203ENST00000533670 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
AP003716.1-203ENST00000533670 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
AP003716.1-203ENST00000533670 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
AP003716.1-203ENST00000533670 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
AP003716.1-203ENST00000533670 ABCB7O75027 752 aa19.86■□□□□ 0.77
AP003716.1-203ENST00000533670 MYCNP04198 464 aaPredicted RBP19.85■□□□□ 0.77
AP003716.1-203ENST00000533670 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
AP003716.1-203ENST00000533670 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
AP003716.1-203ENST00000533670 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
AP003716.1-203ENST00000533670 MROH2BQ7Z745 1585 aa19.76■□□□□ 0.75
AP003716.1-203ENST00000533670 HMGXB3Q12766 1538 aa19.73■□□□□ 0.75
AP003716.1-203ENST00000533670 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
AP003716.1-203ENST00000533670 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
AP003716.1-203ENST00000533670 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
AP003716.1-203ENST00000533670 POLA2Q14181 598 aa19.47■□□□□ 0.71
AP003716.1-203ENST00000533670 WIZO95785 1651 aa19.46■□□□□ 0.71
AP003716.1-203ENST00000533670 POTEHQ6S545 545 aa19.46■□□□□ 0.71
AP003716.1-203ENST00000533670 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
AP003716.1-203ENST00000533670 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
AP003716.1-203ENST00000533670 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
AP003716.1-203ENST00000533670 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
AP003716.1-203ENST00000533670 NESP48681 1621 aa19.23■□□□□ 0.67
AP003716.1-203ENST00000533670 ATF5Q9Y2D1 282 aaPredicted RBP19.23■□□□□ 0.67
AP003716.1-203ENST00000533670 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
AP003716.1-203ENST00000533670 ZBTB12Q9Y330 459 aaPredicted RBP19.21■□□□□ 0.67
AP003716.1-203ENST00000533670 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
AP003716.1-203ENST00000533670 CFTRP13569 1480 aa19.17■□□□□ 0.66
AP003716.1-203ENST00000533670 ZBTB22O15209 634 aa19.15■□□□□ 0.66
AP003716.1-203ENST00000533670 CCDC88BA6NC98 1476 aa19.15■□□□□ 0.66
AP003716.1-203ENST00000533670 CUX2O14529 1486 aa19.07■□□□□ 0.64
AP003716.1-203ENST00000533670 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
AP003716.1-203ENST00000533670 ATXN8OSP0DMR3 200 aa19.04■□□□□ 0.64
AP003716.1-203ENST00000533670 FANCD2Q9BXW9 1451 aa19.01■□□□□ 0.63
AP003716.1-203ENST00000533670 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
AP003716.1-203ENST00000533670 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
AP003716.1-203ENST00000533670 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
AP003716.1-203ENST00000533670 CHRDL2Q6WN34 429 aa18.94■□□□□ 0.62
AP003716.1-203ENST00000533670 AKT1S1Q96B36 256 aa18.92■□□□□ 0.62
AP003716.1-203ENST00000533670 KIF21AQ7Z4S6 1674 aa18.92■□□□□ 0.62
AP003716.1-203ENST00000533670 WDR62O43379 1518 aa18.88■□□□□ 0.61
AP003716.1-203ENST00000533670 OSCARQ8IYS5 282 aa18.84■□□□□ 0.61
AP003716.1-203ENST00000533670 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
AP003716.1-203ENST00000533670 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms