RNA–Protein interactions for RNA: ENST00000533133.6

MED17-209, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 2,370 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-209ENST00000533133 NISCHQ9Y2I1 1504 aa46.04■■■■■ 4.96
MED17-209ENST00000533133 CCDC180Q9P1Z9 1646 aa39.65■■■■□ 3.94
MED17-209ENST00000533133 ZCCHC6Q5VYS8 1495 aaKnown RBP38.79■■■■□ 3.8
MED17-209ENST00000533133 SHROOM4Q9ULL8 1493 aa38.44■■■■□ 3.74
MED17-209ENST00000533133 DCAF8L2P0C7V8 631 aa38.2■■■■□ 3.71
MED17-209ENST00000533133 DCAF1Q9Y4B6 1507 aa37.84■■■■□ 3.65
MED17-209ENST00000533133 ABCC9O60706 1549 aa37.34■■■■□ 3.57
MED17-209ENST00000533133 SUPT5HO00267 1087 aaKnown RBP37.24■■■■□ 3.55
MED17-209ENST00000533133 MYO15BQ96JP2 1530 aa37.09■■■■□ 3.53
MED17-209ENST00000533133 SCRIBQ14160 1630 aa36.91■■■■□ 3.5
MED17-209ENST00000533133 NACADO15069 1562 aa36.81■■■■□ 3.48
MED17-209ENST00000533133 RB1CC1Q8TDY2 1594 aa36.39■■■■□ 3.42
MED17-209ENST00000533133 RSF1Q96T23 1441 aaPredicted RBP36.05■■■■□ 3.36
MED17-209ENST00000533133 CECR2Q9BXF3 1484 aa35.94■■■■□ 3.34
MED17-209ENST00000533133 UNC13AQ9UPW8 1703 aa35.92■■■■□ 3.34
MED17-209ENST00000533133 CHIC1Q5VXU3 224 aa35.84■■■■□ 3.33
MED17-209ENST00000533133 MROH2BQ7Z745 1585 aa35.74■■■■□ 3.31
MED17-209ENST00000533133 WIZO95785 1651 aa35.52■■■■□ 3.28
MED17-209ENST00000533133 BICRAQ9NZM4 1560 aa35.47■■■■□ 3.27
MED17-209ENST00000533133 PABPN1Q86U42 306 aaKnown RBP eCLIP35.46■■■■□ 3.27
MED17-209ENST00000533133 BAZ1AQ9NRL2 1556 aaPredicted RBP35.43■■■■□ 3.26
MED17-209ENST00000533133 SMARCA4P51532 1647 aa35.28■■■■□ 3.24
MED17-209ENST00000533133 TOP2AP11388 1531 aaKnown RBP34.95■■■■□ 3.19
MED17-209ENST00000533133 TRIM41Q8WV44 630 aa34.78■■■■□ 3.16
MED17-209ENST00000533133 SMARCA2P51531 1590 aa34.75■■■■□ 3.15
MED17-209ENST00000533133 CCDC88BA6NC98 1476 aa34.74■■■■□ 3.15
MED17-209ENST00000533133 EIF4G1Q04637 1599 aaKnown RBP34.71■■■■□ 3.15
MED17-209ENST00000533133 LOC105371045A0A1W2PR82 267 aa34.7■■■■□ 3.14
MED17-209ENST00000533133 PEG3Q9GZU2 1588 aa34.68■■■■□ 3.14
MED17-209ENST00000533133 ATAD2BQ9ULI0 1458 aa34.55■■■■□ 3.12
MED17-209ENST00000533133 FAM9AQ8IZU1 332 aaPredicted RBP34.42■■■■□ 3.1
MED17-209ENST00000533133 BAZ1BQ9UIG0 1483 aaKnown RBP34.38■■■■□ 3.09
MED17-209ENST00000533133 ABCC8Q09428 1581 aa34.36■■■■□ 3.09
MED17-209ENST00000533133 EHMT2Q96KQ7 1210 aa34.11■■■■□ 3.05
MED17-209ENST00000533133 NCAPD3P42695 1498 aa34.05■■■■□ 3.04
MED17-209ENST00000533133 HMGXB3Q12766 1538 aa34■■■■□ 3.03
MED17-209ENST00000533133 HRCP23327 699 aa33.9■■■■□ 3.02
MED17-209ENST00000533133 WRNQ14191 1432 aaPredicted RBP eCLIP33.87■■■■□ 3.01
MED17-209ENST00000533133 SOGA1O94964 1423 aa33.83■■■■□ 3.01
MED17-209ENST00000533133 SYNJ1O43426 1573 aa33.8■■■■□ 3
MED17-209ENST00000533133 RUSC2Q8N2Y8 1516 aa33.73■■■□□ 2.99
MED17-209ENST00000533133 PCGF6Q9BYE7 350 aa33.73■■■□□ 2.99
MED17-209ENST00000533133 CC2D2AQ9P2K1 1620 aa33.69■■■□□ 2.98
MED17-209ENST00000533133 CFTRP13569 1480 aa33.52■■■□□ 2.96
MED17-209ENST00000533133 CSRNP3Q8WYN3 585 aa33.5■■■□□ 2.95
MED17-209ENST00000533133 EEA1Q15075 1411 aa33.5■■■□□ 2.95
MED17-209ENST00000533133 TOP2BQ02880 1626 aa33.47■■■□□ 2.95
MED17-209ENST00000533133 PELP1Q8IZL8 1130 aaKnown RBP33.47■■■□□ 2.95
MED17-209ENST00000533133 BIVM-ERCC5R4GMW8 1640 aa33.39■■■□□ 2.94
MED17-209ENST00000533133 CUX1P39880 1505 aa33.34■■■□□ 2.93
MED17-209ENST00000533133 TRIM26Q12899 539 aaPredicted RBP33.32■■■□□ 2.92
MED17-209ENST00000533133 PRDM2Q13029 1718 aa33.3■■■□□ 2.92
MED17-209ENST00000533133 CADPSQ9ULU8 1353 aa33.29■■■□□ 2.92
MED17-209ENST00000533133 TNIKQ9UKE5 1360 aa33.25■■■□□ 2.91
MED17-209ENST00000533133 CEP162Q5TB80 1403 aa33.24■■■□□ 2.91
MED17-209ENST00000533133 UBTFP17480 764 aaKnown RBP33.24■■■□□ 2.91
MED17-209ENST00000533133 GOLGA3Q08378 1498 aa33.24■■■□□ 2.91
MED17-209ENST00000533133 KIF21BO75037 1637 aa33.16■■■□□ 2.9
MED17-209ENST00000533133 CEP164Q9UPV0 1460 aa33.15■■■□□ 2.9
MED17-209ENST00000533133 PPARGC1BQ86YN6 1023 aaKnown RBP33.15■■■□□ 2.9
MED17-209ENST00000533133 RAPGEF2Q9Y4G8 1499 aa33.07■■■□□ 2.88
MED17-209ENST00000533133 DNAJC5BQ9UF47 199 aa33.04■■■□□ 2.88
MED17-209ENST00000533133 NESP48681 1621 aa33.04■■■□□ 2.88
MED17-209ENST00000533133 FANCD2Q9BXW9 1451 aa32.97■■■□□ 2.87
MED17-209ENST00000533133 KIF27Q86VH2 1401 aa32.9■■■□□ 2.86
MED17-209ENST00000533133 PRXQ9BXM0 1461 aa32.87■■■□□ 2.85
MED17-209ENST00000533133 FGD5Q6ZNL6 1462 aa32.86■■■□□ 2.85
MED17-209ENST00000533133 CLIP1P30622 1438 aa32.81■■■□□ 2.84
MED17-209ENST00000533133 CUX2O14529 1486 aa32.78■■■□□ 2.84
MED17-209ENST00000533133 RANGAP1P46060 587 aaPredicted RBP32.78■■■□□ 2.84
MED17-209ENST00000533133 ERICH3Q5RHP9 1530 aa32.78■■■□□ 2.84
MED17-209ENST00000533133 TTBK1Q5TCY1 1321 aaPredicted RBP32.78■■■□□ 2.84
MED17-209ENST00000533133 LAMC3Q9Y6N6 1575 aa32.75■■■□□ 2.83
MED17-209ENST00000533133 DNMBPQ6XZF7 1577 aa32.7■■■□□ 2.83
MED17-209ENST00000533133 TOPBP1Q92547 1522 aa32.68■■■□□ 2.82
MED17-209ENST00000533133 IGF1RP08069 1367 aa32.64■■■□□ 2.81
MED17-209ENST00000533133 RAD54L2Q9Y4B4 1467 aa32.62■■■□□ 2.81
MED17-209ENST00000533133 POLA1P09884 1462 aaPredicted RBP32.61■■■□□ 2.81
MED17-209ENST00000533133 URB2Q14146 1524 aaKnown RBP32.58■■■□□ 2.81
MED17-209ENST00000533133 VPS8Q8N3P4 1428 aa32.56■■■□□ 2.8
MED17-209ENST00000533133 KIF21AQ7Z4S6 1674 aa32.52■■■□□ 2.8
MED17-209ENST00000533133 PDS5BQ9NTI5 1447 aa32.5■■■□□ 2.79
MED17-209ENST00000533133 ABCA10Q8WWZ4 1543 aa32.47■■■□□ 2.79
MED17-209ENST00000533133 CARMIL1Q5VZK9 1371 aa32.46■■■□□ 2.79
MED17-209ENST00000533133 ARAP1Q96P48 1450 aa32.44■■■□□ 2.78
MED17-209ENST00000533133 MYT1Q01538 1121 aa32.38■■■□□ 2.77
MED17-209ENST00000533133 WDR97A6NE52 1622 aa32.33■■■□□ 2.77
MED17-209ENST00000533133 ARHGAP35Q9NRY4 1499 aa32.31■■■□□ 2.76
MED17-209ENST00000533133 TDRD9Q8NDG6 1382 aaKnown RBP32.25■■■□□ 2.75
MED17-209ENST00000533133 APLP2Q06481 763 aa32.24■■■□□ 2.75
MED17-209ENST00000533133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.19■■■□□ 2.74
MED17-209ENST00000533133 ABCA5Q8WWZ7 1642 aa32.19■■■□□ 2.74
MED17-209ENST00000533133 CUL7Q14999 1698 aa32.16■■■□□ 2.74
MED17-209ENST00000533133 SCAF1Q9H7N4 1312 aaKnown RBP32.15■■■□□ 2.74
MED17-209ENST00000533133 TARBP1Q13395 1621 aaKnown RBP32.13■■■□□ 2.73
MED17-209ENST00000533133 ZEB1P37275 1124 aaPredicted RBP32.12■■■□□ 2.73
MED17-209ENST00000533133 GAPVD1Q14C86 1478 aa32.12■■■□□ 2.73
MED17-209ENST00000533133 MRC2Q9UBG0 1479 aa32.09■■■□□ 2.73
MED17-209ENST00000533133 KANK4Q5T7N3 995 aaPredicted RBP32.08■■■□□ 2.73
MED17-209ENST00000533133 CCER1Q8TC90 406 aaPredicted RBP32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms