RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 NISCHQ9Y2I1 1504 aa38.65■■■■□ 3.78
UBXN1-213ENST00000532904 CCDC180Q9P1Z9 1646 aa33.56■■■□□ 2.96
UBXN1-213ENST00000532904 ZCCHC6Q5VYS8 1495 aaKnown RBP32.57■■■□□ 2.8
UBXN1-213ENST00000532904 DCAF1Q9Y4B6 1507 aa32.03■■■□□ 2.72
UBXN1-213ENST00000532904 SHROOM4Q9ULL8 1493 aa31.71■■■□□ 2.67
UBXN1-213ENST00000532904 DCAF8L2P0C7V8 631 aa31.63■■■□□ 2.65
UBXN1-213ENST00000532904 MYO15BQ96JP2 1530 aa31.49■■■□□ 2.63
UBXN1-213ENST00000532904 ABCC9O60706 1549 aa31.2■■■□□ 2.58
UBXN1-213ENST00000532904 NACADO15069 1562 aa31.12■■■□□ 2.57
UBXN1-213ENST00000532904 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
UBXN1-213ENST00000532904 SUPT5HO00267 1087 aaKnown RBP30.75■■■□□ 2.51
UBXN1-213ENST00000532904 RB1CC1Q8TDY2 1594 aa30.73■■■□□ 2.51
UBXN1-213ENST00000532904 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
UBXN1-213ENST00000532904 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
UBXN1-213ENST00000532904 CHIC1Q5VXU3 224 aa30.06■■■□□ 2.4
UBXN1-213ENST00000532904 CECR2Q9BXF3 1484 aa29.96■■■□□ 2.39
UBXN1-213ENST00000532904 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
UBXN1-213ENST00000532904 BAZ1AQ9NRL2 1556 aaPredicted RBP29.82■■■□□ 2.36
UBXN1-213ENST00000532904 BICRAQ9NZM4 1560 aa29.8■■■□□ 2.36
UBXN1-213ENST00000532904 HRCP23327 699 aa29.67■■■□□ 2.34
UBXN1-213ENST00000532904 WIZO95785 1651 aa29.64■■■□□ 2.34
UBXN1-213ENST00000532904 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
UBXN1-213ENST00000532904 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
UBXN1-213ENST00000532904 TOP2AP11388 1531 aaKnown RBP29.37■■■□□ 2.29
UBXN1-213ENST00000532904 PCGF6Q9BYE7 350 aa29.35■■■□□ 2.29
UBXN1-213ENST00000532904 PEG3Q9GZU2 1588 aa29.29■■■□□ 2.28
UBXN1-213ENST00000532904 SMARCA2P51531 1590 aa29.1■■■□□ 2.25
UBXN1-213ENST00000532904 LOC105371045A0A1W2PR82 267 aa29.09■■■□□ 2.25
UBXN1-213ENST00000532904 EIF4G1Q04637 1599 aaKnown RBP29.07■■■□□ 2.24
UBXN1-213ENST00000532904 CCDC88BA6NC98 1476 aa29.05■■■□□ 2.24
UBXN1-213ENST00000532904 ATAD2BQ9ULI0 1458 aa29.01■■■□□ 2.23
UBXN1-213ENST00000532904 TRIM41Q8WV44 630 aa28.92■■■□□ 2.22
UBXN1-213ENST00000532904 PPARGC1BQ86YN6 1023 aaKnown RBP28.88■■■□□ 2.21
UBXN1-213ENST00000532904 BAZ1BQ9UIG0 1483 aaKnown RBP28.86■■■□□ 2.21
UBXN1-213ENST00000532904 TRIM26Q12899 539 aaPredicted RBP28.82■■■□□ 2.2
UBXN1-213ENST00000532904 HMGXB3Q12766 1538 aa28.73■■■□□ 2.19
UBXN1-213ENST00000532904 NCAPD3P42695 1498 aa28.71■■■□□ 2.19
UBXN1-213ENST00000532904 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
UBXN1-213ENST00000532904 ZEB1P37275 1124 aaPredicted RBP28.38■■■□□ 2.13
UBXN1-213ENST00000532904 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
UBXN1-213ENST00000532904 FAM9AQ8IZU1 332 aaPredicted RBP28.34■■■□□ 2.13
UBXN1-213ENST00000532904 CC2D2AQ9P2K1 1620 aa28.3■■■□□ 2.12
UBXN1-213ENST00000532904 EEA1Q15075 1411 aa28.24■■■□□ 2.11
UBXN1-213ENST00000532904 SYNJ1O43426 1573 aa28.22■■■□□ 2.11
UBXN1-213ENST00000532904 CFTRP13569 1480 aa28.19■■■□□ 2.1
UBXN1-213ENST00000532904 PRDM2Q13029 1718 aa28.14■■■□□ 2.1
UBXN1-213ENST00000532904 SOGA1O94964 1423 aa28.11■■■□□ 2.09
UBXN1-213ENST00000532904 TOP2BQ02880 1626 aa28.11■■■□□ 2.09
UBXN1-213ENST00000532904 BIVM-ERCC5R4GMW8 1640 aa28.09■■■□□ 2.09
UBXN1-213ENST00000532904 CADPSQ9ULU8 1353 aa27.98■■■□□ 2.07
UBXN1-213ENST00000532904 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
UBXN1-213ENST00000532904 CSRNP3Q8WYN3 585 aa27.97■■■□□ 2.07
UBXN1-213ENST00000532904 EHMT2Q96KQ7 1210 aa27.94■■■□□ 2.06
UBXN1-213ENST00000532904 CUX1P39880 1505 aa27.89■■■□□ 2.06
UBXN1-213ENST00000532904 KIF21BO75037 1637 aa27.84■■■□□ 2.05
UBXN1-213ENST00000532904 TNIKQ9UKE5 1360 aa27.84■■■□□ 2.05
UBXN1-213ENST00000532904 GOLGA3Q08378 1498 aa27.82■■■□□ 2.04
UBXN1-213ENST00000532904 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
UBXN1-213ENST00000532904 CEP162Q5TB80 1403 aa27.69■■■□□ 2.02
UBXN1-213ENST00000532904 LAMC3Q9Y6N6 1575 aa27.67■■■□□ 2.02
UBXN1-213ENST00000532904 FANCD2Q9BXW9 1451 aa27.66■■■□□ 2.02
UBXN1-213ENST00000532904 UBTFP17480 764 aaKnown RBP27.61■■■□□ 2.01
UBXN1-213ENST00000532904 KIF27Q86VH2 1401 aa27.6■■■□□ 2.01
UBXN1-213ENST00000532904 ERICH3Q5RHP9 1530 aa27.58■■■□□ 2.01
UBXN1-213ENST00000532904 PRXQ9BXM0 1461 aa27.55■■■□□ 2
UBXN1-213ENST00000532904 NESP48681 1621 aa27.54■■■□□ 2
UBXN1-213ENST00000532904 RAPGEF2Q9Y4G8 1499 aa27.53■■■□□ 2
UBXN1-213ENST00000532904 DNMBPQ6XZF7 1577 aa27.53■■■□□ 2
UBXN1-213ENST00000532904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.51■■□□□ 1.99
UBXN1-213ENST00000532904 FGD5Q6ZNL6 1462 aa27.51■■□□□ 1.99
UBXN1-213ENST00000532904 CCER1Q8TC90 406 aaPredicted RBP27.49■■□□□ 1.99
UBXN1-213ENST00000532904 SCAF1Q9H7N4 1312 aaKnown RBP27.47■■□□□ 1.99
UBXN1-213ENST00000532904 TOPBP1Q92547 1522 aa27.43■■□□□ 1.98
UBXN1-213ENST00000532904 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
UBXN1-213ENST00000532904 CUX2O14529 1486 aa27.4■■□□□ 1.98
UBXN1-213ENST00000532904 CLIP1P30622 1438 aa27.38■■□□□ 1.97
UBXN1-213ENST00000532904 PELP1Q8IZL8 1130 aaKnown RBP27.37■■□□□ 1.97
UBXN1-213ENST00000532904 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
UBXN1-213ENST00000532904 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
UBXN1-213ENST00000532904 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
UBXN1-213ENST00000532904 IGF1RP08069 1367 aa27.31■■□□□ 1.96
UBXN1-213ENST00000532904 URB2Q14146 1524 aaKnown RBP27.29■■□□□ 1.96
UBXN1-213ENST00000532904 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
UBXN1-213ENST00000532904 VPS8Q8N3P4 1428 aa27.22■■□□□ 1.95
UBXN1-213ENST00000532904 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
UBXN1-213ENST00000532904 RAD54L2Q9Y4B4 1467 aa27.2■■□□□ 1.94
UBXN1-213ENST00000532904 CARMIL1Q5VZK9 1371 aa27.17■■□□□ 1.94
UBXN1-213ENST00000532904 ACIN1Q9UKV3 1341 aaKnown RBP27.16■■□□□ 1.94
UBXN1-213ENST00000532904 TTBK1Q5TCY1 1321 aaPredicted RBP27.15■■□□□ 1.94
UBXN1-213ENST00000532904 DIEXFQ68CQ4 756 aaKnown RBP27.14■■□□□ 1.94
UBXN1-213ENST00000532904 CUL7Q14999 1698 aa27.11■■□□□ 1.93
UBXN1-213ENST00000532904 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
UBXN1-213ENST00000532904 ABCA5Q8WWZ7 1642 aa27.06■■□□□ 1.92
UBXN1-213ENST00000532904 NEUROD1Q13562 356 aa27.04■■□□□ 1.92
UBXN1-213ENST00000532904 MRC2Q9UBG0 1479 aa27.04■■□□□ 1.92
UBXN1-213ENST00000532904 TARBP1Q13395 1621 aaKnown RBP27■■□□□ 1.91
UBXN1-213ENST00000532904 ARHGAP35Q9NRY4 1499 aa26.98■■□□□ 1.91
UBXN1-213ENST00000532904 CENPBP07199 599 aaPredicted RBP26.96■■□□□ 1.91
UBXN1-213ENST00000532904 GAPVD1Q14C86 1478 aa26.94■■□□□ 1.9
UBXN1-213ENST00000532904 RANGAP1P46060 587 aaPredicted RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms