RNA–Protein interactions for RNA: ENST00000532256.1

PSMA1-212, Transcript of proteasome subunit alpha 1, humanhuman

TSL 2

Gene PSMA1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-212ENST00000532256 NISCHQ9Y2I1 1504 aa40.52■■■■■ 4.08
PSMA1-212ENST00000532256 CCDC180Q9P1Z9 1646 aa36.03■■■■□ 3.36
PSMA1-212ENST00000532256 ABCC9O60706 1549 aa35.53■■■■□ 3.28
PSMA1-212ENST00000532256 RB1CC1Q8TDY2 1594 aa34.04■■■■□ 3.04
PSMA1-212ENST00000532256 NACADO15069 1562 aa33.98■■■■□ 3.03
PSMA1-212ENST00000532256 DCAF8L2P0C7V8 631 aa33.93■■■■□ 3.02
PSMA1-212ENST00000532256 MYO15BQ96JP2 1530 aa33.74■■■□□ 2.99
PSMA1-212ENST00000532256 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
PSMA1-212ENST00000532256 DCAF1Q9Y4B6 1507 aa33.51■■■□□ 2.95
PSMA1-212ENST00000532256 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
PSMA1-212ENST00000532256 PABPN1Q86U42 306 aaKnown RBP eCLIP33.23■■■□□ 2.91
PSMA1-212ENST00000532256 BICRAQ9NZM4 1560 aa33.09■■■□□ 2.89
PSMA1-212ENST00000532256 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
PSMA1-212ENST00000532256 SCRIBQ14160 1630 aa32.86■■■□□ 2.85
PSMA1-212ENST00000532256 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
PSMA1-212ENST00000532256 EIF4G1Q04637 1599 aaKnown RBP32.2■■■□□ 2.75
PSMA1-212ENST00000532256 CC2D2AQ9P2K1 1620 aa32.12■■■□□ 2.73
PSMA1-212ENST00000532256 CECR2Q9BXF3 1484 aa31.96■■■□□ 2.71
PSMA1-212ENST00000532256 SMARCA4P51532 1647 aa31.44■■■□□ 2.62
PSMA1-212ENST00000532256 NCAPD3P42695 1498 aa31.42■■■□□ 2.62
PSMA1-212ENST00000532256 ATAD2BQ9ULI0 1458 aa31.39■■■□□ 2.62
PSMA1-212ENST00000532256 BAZ1AQ9NRL2 1556 aaPredicted RBP31.37■■■□□ 2.61
PSMA1-212ENST00000532256 SMARCA2P51531 1590 aa31.27■■■□□ 2.6
PSMA1-212ENST00000532256 MROH2BQ7Z745 1585 aa31.23■■■□□ 2.59
PSMA1-212ENST00000532256 PEG3Q9GZU2 1588 aa31.17■■■□□ 2.58
PSMA1-212ENST00000532256 HMGXB3Q12766 1538 aa31.17■■■□□ 2.58
PSMA1-212ENST00000532256 BAZ1BQ9UIG0 1483 aaKnown RBP31.06■■■□□ 2.56
PSMA1-212ENST00000532256 WIZO95785 1651 aa30.84■■■□□ 2.53
PSMA1-212ENST00000532256 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
PSMA1-212ENST00000532256 NESP48681 1621 aa30.71■■■□□ 2.51
PSMA1-212ENST00000532256 ERCC6Q03468 1493 aa30.59■■■□□ 2.49
PSMA1-212ENST00000532256 LAMC3Q9Y6N6 1575 aa30.54■■■□□ 2.48
PSMA1-212ENST00000532256 TOP2AP11388 1531 aaKnown RBP30.49■■■□□ 2.47
PSMA1-212ENST00000532256 CADPSQ9ULU8 1353 aa30.48■■■□□ 2.47
PSMA1-212ENST00000532256 CUX2O14529 1486 aa30.38■■■□□ 2.45
PSMA1-212ENST00000532256 PDS5BQ9NTI5 1447 aa30.38■■■□□ 2.45
PSMA1-212ENST00000532256 KIF21AQ7Z4S6 1674 aa30.26■■■□□ 2.43
PSMA1-212ENST00000532256 CFTRP13569 1480 aa30.25■■■□□ 2.43
PSMA1-212ENST00000532256 THOC2Q8NI27 1593 aaKnown RBP30.24■■■□□ 2.43
PSMA1-212ENST00000532256 CCDC88BA6NC98 1476 aa30.2■■■□□ 2.43
PSMA1-212ENST00000532256 FANCD2Q9BXW9 1451 aa30.09■■■□□ 2.41
PSMA1-212ENST00000532256 MRC2Q9UBG0 1479 aa30.06■■■□□ 2.4
PSMA1-212ENST00000532256 CEP164Q9UPV0 1460 aa30.05■■■□□ 2.4
PSMA1-212ENST00000532256 WDR62O43379 1518 aa29.98■■■□□ 2.39
PSMA1-212ENST00000532256 PRDM2Q13029 1718 aa29.85■■■□□ 2.37
PSMA1-212ENST00000532256 URB2Q14146 1524 aaKnown RBP29.83■■■□□ 2.37
PSMA1-212ENST00000532256 SUPT5HO00267 1087 aaKnown RBP29.83■■■□□ 2.37
PSMA1-212ENST00000532256 DNAJC5Q9H3Z4 198 aa29.82■■■□□ 2.36
PSMA1-212ENST00000532256 TOPBP1Q92547 1522 aa29.59■■■□□ 2.33
PSMA1-212ENST00000532256 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
PSMA1-212ENST00000532256 DNMBPQ6XZF7 1577 aa29.51■■■□□ 2.31
PSMA1-212ENST00000532256 IFT140Q96RY7 1462 aa29.45■■■□□ 2.31
PSMA1-212ENST00000532256 ZNF608Q9ULD9 1512 aaPredicted RBP29.37■■■□□ 2.29
PSMA1-212ENST00000532256 POLA1P09884 1462 aaPredicted RBP29.33■■■□□ 2.29
PSMA1-212ENST00000532256 CUX1P39880 1505 aa29.3■■■□□ 2.28
PSMA1-212ENST00000532256 TARBP1Q13395 1621 aaKnown RBP29.29■■■□□ 2.28
PSMA1-212ENST00000532256 RAD54L2Q9Y4B4 1467 aa29.23■■■□□ 2.27
PSMA1-212ENST00000532256 SOGA1O94964 1423 aa29.22■■■□□ 2.27
PSMA1-212ENST00000532256 FGD5Q6ZNL6 1462 aa29.21■■■□□ 2.27
PSMA1-212ENST00000532256 AQRO60306 1485 aaKnown RBP eCLIP29.19■■■□□ 2.269e-8■■■□□ 18.7
PSMA1-212ENST00000532256 EIF4G3O43432 1585 aaKnown RBP29.17■■■□□ 2.26
PSMA1-212ENST00000532256 OSCARQ8IYS5 282 aa29.14■■■□□ 2.26
PSMA1-212ENST00000532256 TDRD9Q8NDG6 1382 aaKnown RBP29.1■■■□□ 2.25
PSMA1-212ENST00000532256 WRNQ14191 1432 aaPredicted RBP eCLIP29.02■■■□□ 2.24
PSMA1-212ENST00000532256 WDR97A6NE52 1622 aa28.98■■■□□ 2.23
PSMA1-212ENST00000532256 TOP2BQ02880 1626 aa28.95■■■□□ 2.23
PSMA1-212ENST00000532256 SYNJ1O43426 1573 aa28.94■■■□□ 2.22
PSMA1-212ENST00000532256 BIVM-ERCC5R4GMW8 1640 aa28.94■■■□□ 2.22
PSMA1-212ENST00000532256 ABCA10Q8WWZ4 1543 aa28.94■■■□□ 2.22
PSMA1-212ENST00000532256 GRIN2BQ13224 1484 aa28.88■■■□□ 2.21
PSMA1-212ENST00000532256 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
PSMA1-212ENST00000532256 SNAPC4Q5SXM2 1469 aa28.85■■■□□ 2.21
PSMA1-212ENST00000532256 FBLN2P98095 1184 aa28.84■■■□□ 2.21
PSMA1-212ENST00000532256 CHD1O14646 1710 aa28.82■■■□□ 2.2
PSMA1-212ENST00000532256 MAGI1Q96QZ7 1491 aaPredicted RBP28.81■■■□□ 2.2
PSMA1-212ENST00000532256 ABCA5Q8WWZ7 1642 aa28.8■■■□□ 2.2
PSMA1-212ENST00000532256 CHMP7Q8WUX9 453 aaPredicted RBP28.74■■■□□ 2.19
PSMA1-212ENST00000532256 PBRM1Q86U86 1689 aa28.72■■■□□ 2.19
PSMA1-212ENST00000532256 SYNJ2O15056 1496 aa28.72■■■□□ 2.19
PSMA1-212ENST00000532256 TRIM41Q8WV44 630 aa28.66■■■□□ 2.18
PSMA1-212ENST00000532256 RIMBP3CA6NJZ7 1639 aa28.63■■■□□ 2.17
PSMA1-212ENST00000532256 RIMBP3BA6NNM3 1639 aa28.63■■■□□ 2.17
PSMA1-212ENST00000532256 RIMBP3Q9UFD9 1639 aa28.63■■■□□ 2.17
PSMA1-212ENST00000532256 ARHGEF11O15085 1522 aa28.62■■■□□ 2.17
PSMA1-212ENST00000532256 CLASP1Q7Z460 1538 aa28.58■■■□□ 2.17
PSMA1-212ENST00000532256 ERICH3Q5RHP9 1530 aa28.56■■■□□ 2.16
PSMA1-212ENST00000532256 ADAMTS12P58397 1594 aa28.53■■■□□ 2.16
PSMA1-212ENST00000532256 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
PSMA1-212ENST00000532256 GRIN2AQ12879 1464 aa28.51■■■□□ 2.15
PSMA1-212ENST00000532256 NUP160Q12769 1436 aa28.43■■■□□ 2.14
PSMA1-212ENST00000532256 IGF1RP08069 1367 aa28.42■■■□□ 2.14
PSMA1-212ENST00000532256 CYB5RLQ6IPT4 315 aa28.42■■■□□ 2.14
PSMA1-212ENST00000532256 KIF27Q86VH2 1401 aa28.42■■■□□ 2.14
PSMA1-212ENST00000532256 ARAP1Q96P48 1450 aa28.4■■■□□ 2.14
PSMA1-212ENST00000532256 CEP170Q5SW79 1584 aa28.37■■■□□ 2.13
PSMA1-212ENST00000532256 CUL7Q14999 1698 aa28.2■■■□□ 2.11
PSMA1-212ENST00000532256 SHROOM2Q13796 1616 aa28.19■■■□□ 2.1
PSMA1-212ENST00000532256 CARMIL1Q5VZK9 1371 aa28.19■■■□□ 2.1
PSMA1-212ENST00000532256 ERCC6L2Q5T890 1561 aa28.19■■■□□ 2.1
PSMA1-212ENST00000532256 JPH4Q96JJ6 628 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms