RNA–Protein interactions for RNA: ENST00000531621.5

EEF1D-238, Transcript of eukaryotic translation elongation factor 1 delta, human

TSL 3 BASIC

Gene EEF1D, Length 840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EEF1D-238	ENST00000531621	NISCH	Q9Y2I1	1504 aa		42.06	■■■■■ 4.32
EEF1D-238	ENST00000531621	CCDC180	Q9P1Z9	1646 aa		37.61	■■■■□ 3.61
EEF1D-238	ENST00000531621	ABCC9	O60706	1549 aa		37.28	■■■■□ 3.56
EEF1D-238	ENST00000531621	DCAF8L2	P0C7V8	631 aa		35.65	■■■■□ 3.3
EEF1D-238	ENST00000531621	RB1CC1	Q8TDY2	1594 aa		35.6	■■■■□ 3.29
EEF1D-238	ENST00000531621	NACAD	O15069	1562 aa		35.43	■■■■□ 3.26
EEF1D-238	ENST00000531621	MYO15B	Q96JP2	1530 aa		35.05	■■■■□ 3.2
EEF1D-238	ENST00000531621	ZCCHC6	Q5VYS8	1495 aa	Known RBP	34.96	■■■■□ 3.19
EEF1D-238	ENST00000531621	UNC13A	Q9UPW8	1703 aa		34.88	■■■■□ 3.17
EEF1D-238	ENST00000531621	DCAF1	Q9Y4B6	1507 aa		34.75	■■■■□ 3.15
EEF1D-238	ENST00000531621	PABPN1	Q86U42	306 aa	Known RBP eCLIP	34.74	■■■■□ 3.15	1e-7	■■■□□ 15
EEF1D-238	ENST00000531621	DNAJC5B	Q9UF47	199 aa		34.65	■■■■□ 3.14
EEF1D-238	ENST00000531621	BICRA	Q9NZM4	1560 aa		34.62	■■■■□ 3.13
EEF1D-238	ENST00000531621	SCRIB	Q14160	1630 aa		34.33	■■■■□ 3.09
EEF1D-238	ENST00000531621	SHROOM4	Q9ULL8	1493 aa		34.11	■■■■□ 3.05
EEF1D-238	ENST00000531621	EIF4G1	Q04637	1599 aa	Known RBP	33.71	■■■□□ 2.99
EEF1D-238	ENST00000531621	CC2D2A	Q9P2K1	1620 aa		33.7	■■■□□ 2.99
EEF1D-238	ENST00000531621	CECR2	Q9BXF3	1484 aa		33.52	■■■□□ 2.96
EEF1D-238	ENST00000531621	SMARCA4	P51532	1647 aa		32.77	■■■□□ 2.84
EEF1D-238	ENST00000531621	NCAPD3	P42695	1498 aa		32.7	■■■□□ 2.83
EEF1D-238	ENST00000531621	ATAD2B	Q9ULI0	1458 aa		32.68	■■■□□ 2.82
EEF1D-238	ENST00000531621	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	32.62	■■■□□ 2.81
EEF1D-238	ENST00000531621	SMARCA2	P51531	1590 aa		32.59	■■■□□ 2.81
EEF1D-238	ENST00000531621	HMGXB3	Q12766	1538 aa		32.52	■■■□□ 2.8
EEF1D-238	ENST00000531621	MROH2B	Q7Z745	1585 aa		32.44	■■■□□ 2.78
EEF1D-238	ENST00000531621	PEG3	Q9GZU2	1588 aa		32.42	■■■□□ 2.78
EEF1D-238	ENST00000531621	BAZ1B	Q9UIG0	1483 aa	Known RBP	32.38	■■■□□ 2.77
EEF1D-238	ENST00000531621	NES	P48681	1621 aa		32.15	■■■□□ 2.74
EEF1D-238	ENST00000531621	ERCC6	Q03468	1493 aa		32.13	■■■□□ 2.73
EEF1D-238	ENST00000531621	WIZ	O95785	1651 aa		32.08	■■■□□ 2.73
EEF1D-238	ENST00000531621	RSF1	Q96T23	1441 aa	Predicted RBP	31.98	■■■□□ 2.71
EEF1D-238	ENST00000531621	CUX2	O14529	1486 aa		31.94	■■■□□ 2.7
EEF1D-238	ENST00000531621	LAMC3	Q9Y6N6	1575 aa		31.93	■■■□□ 2.7
EEF1D-238	ENST00000531621	THOC2	Q8NI27	1593 aa	Known RBP	31.77	■■■□□ 2.68
EEF1D-238	ENST00000531621	KIF21A	Q7Z4S6	1674 aa		31.76	■■■□□ 2.67
EEF1D-238	ENST00000531621	CADPS	Q9ULU8	1353 aa		31.72	■■■□□ 2.67
EEF1D-238	ENST00000531621	PDS5B	Q9NTI5	1447 aa		31.69	■■■□□ 2.66
EEF1D-238	ENST00000531621	TOP2A	P11388	1531 aa	Known RBP	31.68	■■■□□ 2.66
EEF1D-238	ENST00000531621	DNAJC5	Q9H3Z4	198 aa		31.51	■■■□□ 2.63
EEF1D-238	ENST00000531621	CFTR	P13569	1480 aa		31.46	■■■□□ 2.63
EEF1D-238	ENST00000531621	MRC2	Q9UBG0	1479 aa		31.45	■■■□□ 2.62
EEF1D-238	ENST00000531621	FANCD2	Q9BXW9	1451 aa		31.39	■■■□□ 2.62
EEF1D-238	ENST00000531621	CEP164	Q9UPV0	1460 aa		31.39	■■■□□ 2.62
EEF1D-238	ENST00000531621	WDR62	O43379	1518 aa		31.39	■■■□□ 2.61
EEF1D-238	ENST00000531621	CCDC88B	A6NC98	1476 aa		31.36	■■■□□ 2.61
EEF1D-238	ENST00000531621	SUPT5H	O00267	1087 aa	Known RBP	31.27	■■■□□ 2.6
EEF1D-238	ENST00000531621	PRDM2	Q13029	1718 aa		31.21	■■■□□ 2.59
EEF1D-238	ENST00000531621	URB2	Q14146	1524 aa	Known RBP	31.14	■■■□□ 2.57
EEF1D-238	ENST00000531621	TOPBP1	Q92547	1522 aa		30.84	■■■□□ 2.53
EEF1D-238	ENST00000531621	DNMBP	Q6XZF7	1577 aa		30.76	■■■□□ 2.52
EEF1D-238	ENST00000531621	ABCC8	Q09428	1581 aa		30.75	■■■□□ 2.51
EEF1D-238	ENST00000531621	IFT140	Q96RY7	1462 aa		30.73	■■■□□ 2.51
EEF1D-238	ENST00000531621	ZNF608	Q9ULD9	1512 aa	Predicted RBP	30.71	■■■□□ 2.51
EEF1D-238	ENST00000531621	TARBP1	Q13395	1621 aa	Known RBP	30.57	■■■□□ 2.48
EEF1D-238	ENST00000531621	EIF4G3	O43432	1585 aa	Known RBP	30.57	■■■□□ 2.48
EEF1D-238	ENST00000531621	POLA1	P09884	1462 aa	Predicted RBP	30.56	■■■□□ 2.48
EEF1D-238	ENST00000531621	OSCAR	Q8IYS5	282 aa		30.49	■■■□□ 2.47
EEF1D-238	ENST00000531621	CUX1	P39880	1505 aa		30.47	■■■□□ 2.47
EEF1D-238	ENST00000531621	SOGA1	O94964	1423 aa		30.45	■■■□□ 2.46
EEF1D-238	ENST00000531621	RAD54L2	Q9Y4B4	1467 aa		30.44	■■■□□ 2.46
EEF1D-238	ENST00000531621	AQR	O60306	1485 aa	Known RBP eCLIP	30.44	■■■□□ 2.46	9e-8	■■■■■ 45.4
EEF1D-238	ENST00000531621	FGD5	Q6ZNL6	1462 aa		30.42	■■■□□ 2.46
EEF1D-238	ENST00000531621	TDRD9	Q8NDG6	1382 aa	Known RBP	30.33	■■■□□ 2.45
EEF1D-238	ENST00000531621	TRIM41	Q8WV44	630 aa		30.29	■■■□□ 2.44
EEF1D-238	ENST00000531621	FBLN2	P98095	1184 aa		30.28	■■■□□ 2.44
EEF1D-238	ENST00000531621	CHD1	O14646	1710 aa		30.27	■■■□□ 2.44
EEF1D-238	ENST00000531621	WDR97	A6NE52	1622 aa		30.23	■■■□□ 2.43
EEF1D-238	ENST00000531621	WRN	Q14191	1432 aa	Predicted RBP eCLIP	30.18	■■■□□ 2.42	2e-6	■■■□□ 16.6
EEF1D-238	ENST00000531621	RIMBP3C	A6NJZ7	1639 aa		30.16	■■■□□ 2.42
EEF1D-238	ENST00000531621	RIMBP3B	A6NNM3	1639 aa		30.16	■■■□□ 2.42
EEF1D-238	ENST00000531621	RIMBP3	Q9UFD9	1639 aa		30.16	■■■□□ 2.42
EEF1D-238	ENST00000531621	SNAPC4	Q5SXM2	1469 aa		30.16	■■■□□ 2.42
EEF1D-238	ENST00000531621	ARHGEF11	O15085	1522 aa		30.09	■■■□□ 2.41
EEF1D-238	ENST00000531621	GRIN2B	Q13224	1484 aa		30.09	■■■□□ 2.41
EEF1D-238	ENST00000531621	CHMP7	Q8WUX9	453 aa	Predicted RBP	30.09	■■■□□ 2.41
EEF1D-238	ENST00000531621	ABCA10	Q8WWZ4	1543 aa		30.07	■■■□□ 2.4
EEF1D-238	ENST00000531621	SYNJ1	O43426	1573 aa		30.07	■■■□□ 2.4
EEF1D-238	ENST00000531621	BIVM-ERCC5	R4GMW8	1640 aa		30.06	■■■□□ 2.4
EEF1D-238	ENST00000531621	MAGI1	Q96QZ7	1491 aa	Predicted RBP	30.06	■■■□□ 2.4
EEF1D-238	ENST00000531621	PBRM1	Q86U86	1689 aa		30.05	■■■□□ 2.4
EEF1D-238	ENST00000531621	TOP2B	Q02880	1626 aa		30.05	■■■□□ 2.4
EEF1D-238	ENST00000531621	GAPVD1	Q14C86	1478 aa		30.04	■■■□□ 2.4
EEF1D-238	ENST00000531621	ABCA5	Q8WWZ7	1642 aa		30.04	■■■□□ 2.4
EEF1D-238	ENST00000531621	SYNJ2	O15056	1496 aa		29.96	■■■□□ 2.39
EEF1D-238	ENST00000531621	CLASP1	Q7Z460	1538 aa		29.92	■■■□□ 2.38
EEF1D-238	ENST00000531621	ARAP1	Q96P48	1450 aa		29.84	■■■□□ 2.37
EEF1D-238	ENST00000531621	ADAMTS12	P58397	1594 aa		29.79	■■■□□ 2.36
EEF1D-238	ENST00000531621	CYB5RL	Q6IPT4	315 aa		29.78	■■■□□ 2.36
EEF1D-238	ENST00000531621	GRIN2A	Q12879	1464 aa		29.73	■■■□□ 2.35
EEF1D-238	ENST00000531621	ERICH3	Q5RHP9	1530 aa		29.7	■■■□□ 2.34
EEF1D-238	ENST00000531621	FHAD1	B1AJZ9	1412 aa		29.67	■■■□□ 2.34
EEF1D-238	ENST00000531621	CEP170	Q5SW79	1584 aa		29.64	■■■□□ 2.33
EEF1D-238	ENST00000531621	NUP160	Q12769	1436 aa		29.62	■■■□□ 2.33
EEF1D-238	ENST00000531621	KIF27	Q86VH2	1401 aa		29.61	■■■□□ 2.33
EEF1D-238	ENST00000531621	IGF1R	P08069	1367 aa		29.53	■■■□□ 2.32
EEF1D-238	ENST00000531621	ERCC6L2	Q5T890	1561 aa		29.52	■■■□□ 2.32
EEF1D-238	ENST00000531621	SHROOM2	Q13796	1616 aa		29.47	■■■□□ 2.31
EEF1D-238	ENST00000531621	JPH4	Q96JJ6	628 aa		29.39	■■■□□ 2.3
EEF1D-238	ENST00000531621	CARMIL1	Q5VZK9	1371 aa		29.38	■■■□□ 2.29
EEF1D-238	ENST00000531621	RUSC2	Q8N2Y8	1516 aa		29.37	■■■□□ 2.29

Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms