RNA–Protein interactions for RNA: ENST00000531012.1

ARRB1-208, Transcript of arrestin beta 1, humanhuman

TSL 2

Gene ARRB1, Length 1,744 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRB1-208ENST00000531012 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
ARRB1-208ENST00000531012 CCDC180Q9P1Z9 1646 aa29.04■■■□□ 2.24
ARRB1-208ENST00000531012 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
ARRB1-208ENST00000531012 ABCC9O60706 1549 aa27.98■■■□□ 2.07
ARRB1-208ENST00000531012 DCAF1Q9Y4B6 1507 aa27.65■■■□□ 2.02
ARRB1-208ENST00000531012 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
ARRB1-208ENST00000531012 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
ARRB1-208ENST00000531012 MYO15BQ96JP2 1530 aa27.23■■□□□ 1.95
ARRB1-208ENST00000531012 NACADO15069 1562 aa26.97■■□□□ 1.91
ARRB1-208ENST00000531012 SCRIBQ14160 1630 aa26.74■■□□□ 1.87
ARRB1-208ENST00000531012 RB1CC1Q8TDY2 1594 aa26.67■■□□□ 1.86
ARRB1-208ENST00000531012 SUPT5HO00267 1087 aaKnown RBP26.52■■□□□ 1.84
ARRB1-208ENST00000531012 DNAJC5BQ9UF47 199 aa26.29■■□□□ 1.8
ARRB1-208ENST00000531012 UNC13AQ9UPW8 1703 aa26.17■■□□□ 1.78
ARRB1-208ENST00000531012 PABPN1Q86U42 306 aaKnown RBP eCLIP26.07■■□□□ 1.76
ARRB1-208ENST00000531012 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
ARRB1-208ENST00000531012 CECR2Q9BXF3 1484 aa25.96■■□□□ 1.75
ARRB1-208ENST00000531012 BICRAQ9NZM4 1560 aa25.89■■□□□ 1.74
ARRB1-208ENST00000531012 MROH2BQ7Z745 1585 aa25.85■■□□□ 1.73
ARRB1-208ENST00000531012 BAZ1AQ9NRL2 1556 aaPredicted RBP25.79■■□□□ 1.72
ARRB1-208ENST00000531012 SMARCA4P51532 1647 aa25.65■■□□□ 1.7
ARRB1-208ENST00000531012 WIZO95785 1651 aa25.65■■□□□ 1.7
ARRB1-208ENST00000531012 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
ARRB1-208ENST00000531012 TOP2AP11388 1531 aaKnown RBP25.4■■□□□ 1.66
ARRB1-208ENST00000531012 PEG3Q9GZU2 1588 aa25.33■■□□□ 1.65
ARRB1-208ENST00000531012 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
ARRB1-208ENST00000531012 SMARCA2P51531 1590 aa25.17■■□□□ 1.62
ARRB1-208ENST00000531012 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
ARRB1-208ENST00000531012 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
ARRB1-208ENST00000531012 CCDC88BA6NC98 1476 aa25.13■■□□□ 1.61
ARRB1-208ENST00000531012 BAZ1BQ9UIG0 1483 aaKnown RBP25.03■■□□□ 1.6
ARRB1-208ENST00000531012 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
ARRB1-208ENST00000531012 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
ARRB1-208ENST00000531012 HMGXB3Q12766 1538 aa24.89■■□□□ 1.58
ARRB1-208ENST00000531012 ABCC8Q09428 1581 aa24.69■■□□□ 1.54
ARRB1-208ENST00000531012 LOC105371045A0A1W2PR82 267 aa24.57■■□□□ 1.52
ARRB1-208ENST00000531012 WRNQ14191 1432 aaPredicted RBP eCLIP24.5■■□□□ 1.51
ARRB1-208ENST00000531012 FAM9AQ8IZU1 332 aaPredicted RBP24.47■■□□□ 1.51
ARRB1-208ENST00000531012 CFTRP13569 1480 aa24.42■■□□□ 1.5
ARRB1-208ENST00000531012 SYNJ1O43426 1573 aa24.4■■□□□ 1.5
ARRB1-208ENST00000531012 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
ARRB1-208ENST00000531012 EEA1Q15075 1411 aa24.29■■□□□ 1.48
ARRB1-208ENST00000531012 SOGA1O94964 1423 aa24.28■■□□□ 1.48
ARRB1-208ENST00000531012 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
ARRB1-208ENST00000531012 CADPSQ9ULU8 1353 aa24.27■■□□□ 1.48
ARRB1-208ENST00000531012 BIVM-ERCC5R4GMW8 1640 aa24.26■■□□□ 1.47
ARRB1-208ENST00000531012 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
ARRB1-208ENST00000531012 RUSC2Q8N2Y8 1516 aa24.17■■□□□ 1.46
ARRB1-208ENST00000531012 ERCC6Q03468 1493 aa24.17■■□□□ 1.46
ARRB1-208ENST00000531012 CUX1P39880 1505 aa24.15■■□□□ 1.46
ARRB1-208ENST00000531012 CSRNP3Q8WYN3 585 aa24.11■■□□□ 1.45
ARRB1-208ENST00000531012 EHMT2Q96KQ7 1210 aa24.1■■□□□ 1.45
ARRB1-208ENST00000531012 CUX2O14529 1486 aa24.1■■□□□ 1.45
ARRB1-208ENST00000531012 FANCD2Q9BXW9 1451 aa24.01■■□□□ 1.43
ARRB1-208ENST00000531012 LAMC3Q9Y6N6 1575 aa24.01■■□□□ 1.43
ARRB1-208ENST00000531012 NESP48681 1621 aa24■■□□□ 1.43
ARRB1-208ENST00000531012 KIF21BO75037 1637 aa23.97■■□□□ 1.43
ARRB1-208ENST00000531012 GOLGA3Q08378 1498 aa23.97■■□□□ 1.43
ARRB1-208ENST00000531012 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.42
ARRB1-208ENST00000531012 TNIKQ9UKE5 1360 aa23.94■■□□□ 1.42
ARRB1-208ENST00000531012 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
ARRB1-208ENST00000531012 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
ARRB1-208ENST00000531012 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
ARRB1-208ENST00000531012 CEP162Q5TB80 1403 aa23.83■■□□□ 1.41
ARRB1-208ENST00000531012 UBTFP17480 764 aaKnown RBP23.81■■□□□ 1.4
ARRB1-208ENST00000531012 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
ARRB1-208ENST00000531012 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
ARRB1-208ENST00000531012 PRXQ9BXM0 1461 aa23.77■■□□□ 1.4
ARRB1-208ENST00000531012 RAPGEF2Q9Y4G8 1499 aa23.77■■□□□ 1.4
ARRB1-208ENST00000531012 ERICH3Q5RHP9 1530 aa23.76■■□□□ 1.39
ARRB1-208ENST00000531012 THOC2Q8NI27 1593 aaKnown RBP23.73■■□□□ 1.39
ARRB1-208ENST00000531012 PCGF6Q9BYE7 350 aa23.71■■□□□ 1.39
ARRB1-208ENST00000531012 URB2Q14146 1524 aaKnown RBP23.71■■□□□ 1.39
ARRB1-208ENST00000531012 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.38
ARRB1-208ENST00000531012 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
ARRB1-208ENST00000531012 TRIM26Q12899 539 aaPredicted RBP23.66■■□□□ 1.38
ARRB1-208ENST00000531012 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
ARRB1-208ENST00000531012 IGF1RP08069 1367 aa23.61■■□□□ 1.37
ARRB1-208ENST00000531012 RAD54L2Q9Y4B4 1467 aa23.61■■□□□ 1.37
ARRB1-208ENST00000531012 CLIP1P30622 1438 aa23.59■■□□□ 1.37
ARRB1-208ENST00000531012 WDR97A6NE52 1622 aa23.56■■□□□ 1.36
ARRB1-208ENST00000531012 CARMIL1Q5VZK9 1371 aa23.49■■□□□ 1.35
ARRB1-208ENST00000531012 MRC2Q9UBG0 1479 aa23.49■■□□□ 1.35
ARRB1-208ENST00000531012 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
ARRB1-208ENST00000531012 VPS8Q8N3P4 1428 aa23.42■■□□□ 1.34
ARRB1-208ENST00000531012 CUL7Q14999 1698 aa23.42■■□□□ 1.34
ARRB1-208ENST00000531012 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
ARRB1-208ENST00000531012 WDR62O43379 1518 aa23.4■■□□□ 1.34
ARRB1-208ENST00000531012 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.33
ARRB1-208ENST00000531012 GAPVD1Q14C86 1478 aa23.35■■□□□ 1.33
ARRB1-208ENST00000531012 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
ARRB1-208ENST00000531012 RANGAP1P46060 587 aaPredicted RBP23.34■■□□□ 1.33
ARRB1-208ENST00000531012 ARAP1Q96P48 1450 aa23.34■■□□□ 1.33
ARRB1-208ENST00000531012 ARHGAP35Q9NRY4 1499 aa23.28■■□□□ 1.32
ARRB1-208ENST00000531012 HRCP23327 699 aa23.27■■□□□ 1.32
ARRB1-208ENST00000531012 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
ARRB1-208ENST00000531012 PBRM1Q86U86 1689 aa23.22■■□□□ 1.31
ARRB1-208ENST00000531012 CTTNBP2Q8WZ74 1663 aa23.2■■□□□ 1.3
ARRB1-208ENST00000531012 APLP2Q06481 763 aa23.16■■□□□ 1.3
ARRB1-208ENST00000531012 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms