RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 NISCHQ9Y2I1 1504 aa22.39■■□□□ 1.17
SF3B2-210ENST00000530981 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
SF3B2-210ENST00000530981 ABCC9O60706 1549 aa19.41■□□□□ 0.7
SF3B2-210ENST00000530981 DCAF8L2P0C7V8 631 aa18.69■□□□□ 0.58
SF3B2-210ENST00000530981 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
SF3B2-210ENST00000530981 NACADO15069 1562 aa18.59■□□□□ 0.57
SF3B2-210ENST00000530981 RB1CC1Q8TDY2 1594 aa18.58■□□□□ 0.56
SF3B2-210ENST00000530981 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
SF3B2-210ENST00000530981 DCAF1Q9Y4B6 1507 aa18.45■□□□□ 0.54
SF3B2-210ENST00000530981 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
SF3B2-210ENST00000530981 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.516e-10■■■□□ 15.9
SF3B2-210ENST00000530981 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
SF3B2-210ENST00000530981 SCRIBQ14160 1630 aa18.15■□□□□ 0.5
SF3B2-210ENST00000530981 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
SF3B2-210ENST00000530981 SHROOM4Q9ULL8 1493 aa17.81■□□□□ 0.44
SF3B2-210ENST00000530981 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
SF3B2-210ENST00000530981 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
SF3B2-210ENST00000530981 CECR2Q9BXF3 1484 aa17.53■□□□□ 0.4
SF3B2-210ENST00000530981 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
SF3B2-210ENST00000530981 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
SF3B2-210ENST00000530981 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
SF3B2-210ENST00000530981 ATAD2BQ9ULI0 1458 aa17.25■□□□□ 0.35
SF3B2-210ENST00000530981 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
SF3B2-210ENST00000530981 PEG3Q9GZU2 1588 aa17.16■□□□□ 0.34
SF3B2-210ENST00000530981 SMARCA2P51531 1590 aa17.14■□□□□ 0.33
SF3B2-210ENST00000530981 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
SF3B2-210ENST00000530981 WIZO95785 1651 aa17.13■□□□□ 0.33
SF3B2-210ENST00000530981 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
SF3B2-210ENST00000530981 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
SF3B2-210ENST00000530981 NESP48681 1621 aa16.88■□□□□ 0.29
SF3B2-210ENST00000530981 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
SF3B2-210ENST00000530981 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
SF3B2-210ENST00000530981 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
SF3B2-210ENST00000530981 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
SF3B2-210ENST00000530981 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
SF3B2-210ENST00000530981 CFTRP13569 1480 aa16.63■□□□□ 0.25
SF3B2-210ENST00000530981 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
SF3B2-210ENST00000530981 ERCC6Q03468 1493 aa16.61■□□□□ 0.25
SF3B2-210ENST00000530981 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
SF3B2-210ENST00000530981 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.24
SF3B2-210ENST00000530981 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
SF3B2-210ENST00000530981 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
SF3B2-210ENST00000530981 CEP164Q9UPV0 1460 aa16.44■□□□□ 0.22
SF3B2-210ENST00000530981 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
SF3B2-210ENST00000530981 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
SF3B2-210ENST00000530981 CUX2O14529 1486 aa16.4■□□□□ 0.22
SF3B2-210ENST00000530981 WDR62O43379 1518 aa16.39■□□□□ 0.21
SF3B2-210ENST00000530981 TOPBP1Q92547 1522 aa16.28■□□□□ 0.2
SF3B2-210ENST00000530981 CUX1P39880 1505 aa16.23■□□□□ 0.19
SF3B2-210ENST00000530981 DNMBPQ6XZF7 1577 aa16.22■□□□□ 0.19
SF3B2-210ENST00000530981 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
SF3B2-210ENST00000530981 POLA1P09884 1462 aaPredicted RBP16.15■□□□□ 0.18
SF3B2-210ENST00000530981 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.18
SF3B2-210ENST00000530981 RAD54L2Q9Y4B4 1467 aa16.14■□□□□ 0.17
SF3B2-210ENST00000530981 FGD5Q6ZNL6 1462 aa16.12■□□□□ 0.17
SF3B2-210ENST00000530981 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
SF3B2-210ENST00000530981 SYNJ1O43426 1573 aa16.11■□□□□ 0.17
SF3B2-210ENST00000530981 IFT140Q96RY7 1462 aa16.09■□□□□ 0.17
SF3B2-210ENST00000530981 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.16
SF3B2-210ENST00000530981 SOGA1O94964 1423 aa16.07■□□□□ 0.16
SF3B2-210ENST00000530981 AQRO60306 1485 aaKnown RBP eCLIP16.05■□□□□ 0.161e-9■■■□□ 14.8
SF3B2-210ENST00000530981 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
SF3B2-210ENST00000530981 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
SF3B2-210ENST00000530981 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.16
SF3B2-210ENST00000530981 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
SF3B2-210ENST00000530981 WDR97A6NE52 1622 aa15.98■□□□□ 0.15
SF3B2-210ENST00000530981 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
SF3B2-210ENST00000530981 DNAJC5Q9H3Z4 198 aa15.92■□□□□ 0.14
SF3B2-210ENST00000530981 ABCA5Q8WWZ7 1642 aa15.89■□□□□ 0.13
SF3B2-210ENST00000530981 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
SF3B2-210ENST00000530981 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
SF3B2-210ENST00000530981 GRIN2BQ13224 1484 aa15.83■□□□□ 0.12
SF3B2-210ENST00000530981 PBRM1Q86U86 1689 aa15.83■□□□□ 0.12
SF3B2-210ENST00000530981 CHD1O14646 1710 aa15.8■□□□□ 0.12
SF3B2-210ENST00000530981 OSCARQ8IYS5 282 aa15.78■□□□□ 0.12
SF3B2-210ENST00000530981 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
SF3B2-210ENST00000530981 FBLN2P98095 1184 aa15.77■□□□□ 0.12
SF3B2-210ENST00000530981 MAGI1Q96QZ7 1491 aaPredicted RBP15.76■□□□□ 0.11
SF3B2-210ENST00000530981 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
SF3B2-210ENST00000530981 IGF1RP08069 1367 aa15.73■□□□□ 0.11
SF3B2-210ENST00000530981 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
SF3B2-210ENST00000530981 ADAMTS12P58397 1594 aa15.71■□□□□ 0.11
SF3B2-210ENST00000530981 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
SF3B2-210ENST00000530981 CHMP7Q8WUX9 453 aaPredicted RBP15.71■□□□□ 0.11
SF3B2-210ENST00000530981 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
SF3B2-210ENST00000530981 KIF27Q86VH2 1401 aa15.69■□□□□ 0.1
SF3B2-210ENST00000530981 FHAD1B1AJZ9 1412 aa15.66■□□□□ 0.1
SF3B2-210ENST00000530981 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
SF3B2-210ENST00000530981 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
SF3B2-210ENST00000530981 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
SF3B2-210ENST00000530981 NUP160Q12769 1436 aa15.6■□□□□ 0.09
SF3B2-210ENST00000530981 CARMIL1Q5VZK9 1371 aa15.58■□□□□ 0.08
SF3B2-210ENST00000530981 RIMBP3CA6NJZ7 1639 aa15.56■□□□□ 0.08
SF3B2-210ENST00000530981 RIMBP3BA6NNM3 1639 aa15.56■□□□□ 0.08
SF3B2-210ENST00000530981 RIMBP3Q9UFD9 1639 aa15.56■□□□□ 0.08
SF3B2-210ENST00000530981 CUL7Q14999 1698 aa15.55■□□□□ 0.08
SF3B2-210ENST00000530981 ARHGEF11O15085 1522 aa15.55■□□□□ 0.08
SF3B2-210ENST00000530981 ERCC6L2Q5T890 1561 aa15.53■□□□□ 0.08
SF3B2-210ENST00000530981 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
SF3B2-210ENST00000530981 PRXQ9BXM0 1461 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms