RNA–Protein interactions for RNA: ENST00000530898.1

GRINA-206, Transcript of glutamate ionotropic receptor NMDA type subunit associated protein 1, humanhuman

TSL 2

Gene GRINA, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRINA-206ENST00000530898 NISCHQ9Y2I1 1504 aa38.9■■■■□ 3.82
GRINA-206ENST00000530898 CCDC180Q9P1Z9 1646 aa34.65■■■■□ 3.14
GRINA-206ENST00000530898 ABCC9O60706 1549 aa34.39■■■■□ 3.1
GRINA-206ENST00000530898 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
GRINA-206ENST00000530898 DCAF8L2P0C7V8 631 aa32.75■■■□□ 2.83
GRINA-206ENST00000530898 NACADO15069 1562 aa32.71■■■□□ 2.83
GRINA-206ENST00000530898 MYO15BQ96JP2 1530 aa32.38■■■□□ 2.77
GRINA-206ENST00000530898 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
GRINA-206ENST00000530898 PABPN1Q86U42 306 aaKnown RBP eCLIP32.15■■■□□ 2.74
GRINA-206ENST00000530898 DCAF1Q9Y4B6 1507 aa32.12■■■□□ 2.73
GRINA-206ENST00000530898 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
GRINA-206ENST00000530898 DNAJC5BQ9UF47 199 aa32.04■■■□□ 2.72
GRINA-206ENST00000530898 BICRAQ9NZM4 1560 aa31.93■■■□□ 2.7
GRINA-206ENST00000530898 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
GRINA-206ENST00000530898 SHROOM4Q9ULL8 1493 aa31.42■■■□□ 2.62
GRINA-206ENST00000530898 EIF4G1Q04637 1599 aaKnown RBP31.07■■■□□ 2.56
GRINA-206ENST00000530898 CC2D2AQ9P2K1 1620 aa31.06■■■□□ 2.56
GRINA-206ENST00000530898 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
GRINA-206ENST00000530898 NCAPD3P42695 1498 aa30.25■■■□□ 2.43
GRINA-206ENST00000530898 SMARCA4P51532 1647 aa30.23■■■□□ 2.43
GRINA-206ENST00000530898 ATAD2BQ9ULI0 1458 aa30.21■■■□□ 2.43
GRINA-206ENST00000530898 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
GRINA-206ENST00000530898 SMARCA2P51531 1590 aa30.08■■■□□ 2.41
GRINA-206ENST00000530898 MROH2BQ7Z745 1585 aa30.01■■■□□ 2.39
GRINA-206ENST00000530898 HMGXB3Q12766 1538 aa29.98■■■□□ 2.39
GRINA-206ENST00000530898 PEG3Q9GZU2 1588 aa29.93■■■□□ 2.38
GRINA-206ENST00000530898 BAZ1BQ9UIG0 1483 aaKnown RBP29.89■■■□□ 2.38
GRINA-206ENST00000530898 NESP48681 1621 aa29.67■■■□□ 2.34
GRINA-206ENST00000530898 WIZO95785 1651 aa29.65■■■□□ 2.34
GRINA-206ENST00000530898 ERCC6Q03468 1493 aa29.6■■■□□ 2.33
GRINA-206ENST00000530898 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
GRINA-206ENST00000530898 LAMC3Q9Y6N6 1575 aa29.43■■■□□ 2.3
GRINA-206ENST00000530898 CUX2O14529 1486 aa29.41■■■□□ 2.3
GRINA-206ENST00000530898 CADPSQ9ULU8 1353 aa29.36■■■□□ 2.29
GRINA-206ENST00000530898 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
GRINA-206ENST00000530898 TOP2AP11388 1531 aaKnown RBP29.26■■■□□ 2.27
GRINA-206ENST00000530898 KIF21AQ7Z4S6 1674 aa29.23■■■□□ 2.27
GRINA-206ENST00000530898 THOC2Q8NI27 1593 aaKnown RBP29.22■■■□□ 2.27
GRINA-206ENST00000530898 CFTRP13569 1480 aa29.09■■■□□ 2.25
GRINA-206ENST00000530898 DNAJC5Q9H3Z4 198 aa29.06■■■□□ 2.24
GRINA-206ENST00000530898 MRC2Q9UBG0 1479 aa29■■■□□ 2.23
GRINA-206ENST00000530898 CCDC88BA6NC98 1476 aa28.99■■■□□ 2.23
GRINA-206ENST00000530898 FANCD2Q9BXW9 1451 aa28.99■■■□□ 2.23
GRINA-206ENST00000530898 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
GRINA-206ENST00000530898 WDR62O43379 1518 aa28.91■■■□□ 2.22
GRINA-206ENST00000530898 URB2Q14146 1524 aaKnown RBP28.75■■■□□ 2.19
GRINA-206ENST00000530898 PRDM2Q13029 1718 aa28.72■■■□□ 2.19
GRINA-206ENST00000530898 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
GRINA-206ENST00000530898 TOPBP1Q92547 1522 aa28.49■■■□□ 2.15
GRINA-206ENST00000530898 ABCC8Q09428 1581 aa28.42■■■□□ 2.14
GRINA-206ENST00000530898 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
GRINA-206ENST00000530898 IFT140Q96RY7 1462 aa28.38■■■□□ 2.13
GRINA-206ENST00000530898 ZNF608Q9ULD9 1512 aaPredicted RBP28.35■■■□□ 2.13
GRINA-206ENST00000530898 POLA1P09884 1462 aaPredicted RBP28.22■■■□□ 2.11
GRINA-206ENST00000530898 OSCARQ8IYS5 282 aa28.22■■■□□ 2.11
GRINA-206ENST00000530898 TARBP1Q13395 1621 aaKnown RBP28.2■■■□□ 2.1
GRINA-206ENST00000530898 RAD54L2Q9Y4B4 1467 aa28.16■■■□□ 2.1
GRINA-206ENST00000530898 CUX1P39880 1505 aa28.16■■■□□ 2.1
GRINA-206ENST00000530898 AQRO60306 1485 aaKnown RBP eCLIP28.15■■■□□ 2.1
GRINA-206ENST00000530898 SOGA1O94964 1423 aa28.13■■■□□ 2.09
GRINA-206ENST00000530898 EIF4G3O43432 1585 aaKnown RBP28.12■■■□□ 2.09
GRINA-206ENST00000530898 FGD5Q6ZNL6 1462 aa28.1■■■□□ 2.09
GRINA-206ENST00000530898 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
GRINA-206ENST00000530898 TRIM41Q8WV44 630 aa27.94■■■□□ 2.06
GRINA-206ENST00000530898 FBLN2P98095 1184 aa27.89■■■□□ 2.06
GRINA-206ENST00000530898 WDR97A6NE52 1622 aa27.86■■■□□ 2.05
GRINA-206ENST00000530898 CHD1O14646 1710 aa27.86■■■□□ 2.05
GRINA-206ENST00000530898 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.04
GRINA-206ENST00000530898 WRNQ14191 1432 aaPredicted RBP eCLIP27.82■■■□□ 2.04
GRINA-206ENST00000530898 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
GRINA-206ENST00000530898 ABCA10Q8WWZ4 1543 aa27.8■■■□□ 2.04
GRINA-206ENST00000530898 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
GRINA-206ENST00000530898 GAPVD1Q14C86 1478 aa27.77■■■□□ 2.04
GRINA-206ENST00000530898 TOP2BQ02880 1626 aa27.77■■■□□ 2.04
GRINA-206ENST00000530898 RIMBP3CA6NJZ7 1639 aa27.75■■■□□ 2.03
GRINA-206ENST00000530898 RIMBP3BA6NNM3 1639 aa27.75■■■□□ 2.03
GRINA-206ENST00000530898 RIMBP3Q9UFD9 1639 aa27.75■■■□□ 2.03
GRINA-206ENST00000530898 BIVM-ERCC5R4GMW8 1640 aa27.75■■■□□ 2.03
GRINA-206ENST00000530898 MAGI1Q96QZ7 1491 aaPredicted RBP27.75■■■□□ 2.03
GRINA-206ENST00000530898 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
GRINA-206ENST00000530898 ARHGEF11O15085 1522 aa27.71■■■□□ 2.03
GRINA-206ENST00000530898 ABCA5Q8WWZ7 1642 aa27.7■■■□□ 2.02
GRINA-206ENST00000530898 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
GRINA-206ENST00000530898 SYNJ2O15056 1496 aa27.65■■■□□ 2.02
GRINA-206ENST00000530898 CLASP1Q7Z460 1538 aa27.57■■■□□ 2
GRINA-206ENST00000530898 CYB5RLQ6IPT4 315 aa27.56■■■□□ 2
GRINA-206ENST00000530898 ARAP1Q96P48 1450 aa27.48■■□□□ 1.99
GRINA-206ENST00000530898 ADAMTS12P58397 1594 aa27.45■■□□□ 1.99
GRINA-206ENST00000530898 GRIN2AQ12879 1464 aa27.44■■□□□ 1.98
GRINA-206ENST00000530898 FHAD1B1AJZ9 1412 aa27.43■■□□□ 1.98
GRINA-206ENST00000530898 ERICH3Q5RHP9 1530 aa27.43■■□□□ 1.98
GRINA-206ENST00000530898 NUP160Q12769 1436 aa27.36■■□□□ 1.97
GRINA-206ENST00000530898 CEP170Q5SW79 1584 aa27.34■■□□□ 1.97
GRINA-206ENST00000530898 IGF1RP08069 1367 aa27.27■■□□□ 1.96
GRINA-206ENST00000530898 KIF27Q86VH2 1401 aa27.26■■□□□ 1.95
GRINA-206ENST00000530898 ERCC6L2Q5T890 1561 aa27.22■■□□□ 1.95
GRINA-206ENST00000530898 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
GRINA-206ENST00000530898 JPH4Q96JJ6 628 aa27.14■■□□□ 1.94
GRINA-206ENST00000530898 TRHP20396 242 aaPredicted RBP27.09■■□□□ 1.93
GRINA-206ENST00000530898 CARMIL1Q5VZK9 1371 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms