RNA–Protein interactions for RNA: ENST00000530410.1

ARFIP2-208, Transcript of ADP ribosylation factor interacting protein 2, humanhuman

TSL 2

Gene ARFIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP2-208ENST00000530410 NISCHQ9Y2I1 1504 aa47.31■■■■■ 5.16
ARFIP2-208ENST00000530410 CCDC180Q9P1Z9 1646 aa42.18■■■■■ 4.34
ARFIP2-208ENST00000530410 ABCC9O60706 1549 aa41.78■■■■■ 4.28
ARFIP2-208ENST00000530410 RB1CC1Q8TDY2 1594 aa39.9■■■■□ 3.98
ARFIP2-208ENST00000530410 DCAF8L2P0C7V8 631 aa39.77■■■■□ 3.96
ARFIP2-208ENST00000530410 NACADO15069 1562 aa39.74■■■■□ 3.95
ARFIP2-208ENST00000530410 ZCCHC6Q5VYS8 1495 aaKnown RBP39.32■■■■□ 3.89
ARFIP2-208ENST00000530410 MYO15BQ96JP2 1530 aa39.32■■■■□ 3.89
ARFIP2-208ENST00000530410 UNC13AQ9UPW8 1703 aa39.11■■■■□ 3.85
ARFIP2-208ENST00000530410 DCAF1Q9Y4B6 1507 aa39.04■■■■□ 3.84
ARFIP2-208ENST00000530410 PABPN1Q86U42 306 aaKnown RBP eCLIP39.01■■■■□ 3.84
ARFIP2-208ENST00000530410 BICRAQ9NZM4 1560 aa38.81■■■■□ 3.8
ARFIP2-208ENST00000530410 DNAJC5BQ9UF47 199 aa38.78■■■■□ 3.8
ARFIP2-208ENST00000530410 SCRIBQ14160 1630 aa38.58■■■■□ 3.77
ARFIP2-208ENST00000530410 SHROOM4Q9ULL8 1493 aa38.15■■■■□ 3.7
ARFIP2-208ENST00000530410 EIF4G1Q04637 1599 aaKnown RBP37.76■■■■□ 3.64
ARFIP2-208ENST00000530410 CC2D2AQ9P2K1 1620 aa37.74■■■■□ 3.63
ARFIP2-208ENST00000530410 CECR2Q9BXF3 1484 aa37.53■■■■□ 3.6
ARFIP2-208ENST00000530410 SMARCA4P51532 1647 aa36.81■■■■□ 3.48
ARFIP2-208ENST00000530410 ATAD2BQ9ULI0 1458 aa36.7■■■■□ 3.47
ARFIP2-208ENST00000530410 NCAPD3P42695 1498 aa36.69■■■■□ 3.46
ARFIP2-208ENST00000530410 BAZ1AQ9NRL2 1556 aaPredicted RBP36.66■■■■□ 3.46
ARFIP2-208ENST00000530410 SMARCA2P51531 1590 aa36.57■■■■□ 3.45
ARFIP2-208ENST00000530410 MROH2BQ7Z745 1585 aa36.52■■■■□ 3.44
ARFIP2-208ENST00000530410 HMGXB3Q12766 1538 aa36.47■■■■□ 3.43
ARFIP2-208ENST00000530410 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
ARFIP2-208ENST00000530410 BAZ1BQ9UIG0 1483 aaKnown RBP36.37■■■■□ 3.41
ARFIP2-208ENST00000530410 WIZO95785 1651 aa36.13■■■■□ 3.37
ARFIP2-208ENST00000530410 NESP48681 1621 aa36.07■■■■□ 3.36
ARFIP2-208ENST00000530410 ERCC6Q03468 1493 aa35.97■■■■□ 3.35
ARFIP2-208ENST00000530410 RSF1Q96T23 1441 aaPredicted RBP35.92■■■■□ 3.34
ARFIP2-208ENST00000530410 LAMC3Q9Y6N6 1575 aa35.77■■■■□ 3.32
ARFIP2-208ENST00000530410 CUX2O14529 1486 aa35.67■■■■□ 3.3
ARFIP2-208ENST00000530410 TOP2AP11388 1531 aaKnown RBP35.63■■■■□ 3.29
ARFIP2-208ENST00000530410 CADPSQ9ULU8 1353 aa35.62■■■■□ 3.29
ARFIP2-208ENST00000530410 KIF21AQ7Z4S6 1674 aa35.6■■■■□ 3.29
ARFIP2-208ENST00000530410 PDS5BQ9NTI5 1447 aa35.54■■■■□ 3.28
ARFIP2-208ENST00000530410 THOC2Q8NI27 1593 aaKnown RBP35.54■■■■□ 3.28
ARFIP2-208ENST00000530410 CFTRP13569 1480 aa35.33■■■■□ 3.25
ARFIP2-208ENST00000530410 CCDC88BA6NC98 1476 aa35.27■■■■□ 3.24
ARFIP2-208ENST00000530410 MRC2Q9UBG0 1479 aa35.24■■■■□ 3.23
ARFIP2-208ENST00000530410 FANCD2Q9BXW9 1451 aa35.23■■■■□ 3.23
ARFIP2-208ENST00000530410 CEP164Q9UPV0 1460 aa35.21■■■■□ 3.23
ARFIP2-208ENST00000530410 WDR62O43379 1518 aa35.14■■■■□ 3.22
ARFIP2-208ENST00000530410 DNAJC5Q9H3Z4 198 aa35.11■■■■□ 3.21
ARFIP2-208ENST00000530410 PRDM2Q13029 1718 aa35.03■■■■□ 3.2
ARFIP2-208ENST00000530410 URB2Q14146 1524 aaKnown RBP34.96■■■■□ 3.19
ARFIP2-208ENST00000530410 SUPT5HO00267 1087 aaKnown RBP34.79■■■■□ 3.16
ARFIP2-208ENST00000530410 TOPBP1Q92547 1522 aa34.65■■■■□ 3.14
ARFIP2-208ENST00000530410 DNMBPQ6XZF7 1577 aa34.54■■■■□ 3.12
ARFIP2-208ENST00000530410 ABCC8Q09428 1581 aa34.5■■■■□ 3.11
ARFIP2-208ENST00000530410 IFT140Q96RY7 1462 aa34.46■■■■□ 3.11
ARFIP2-208ENST00000530410 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.11
ARFIP2-208ENST00000530410 POLA1P09884 1462 aaPredicted RBP34.33■■■■□ 3.09
ARFIP2-208ENST00000530410 TARBP1Q13395 1621 aaKnown RBP34.3■■■■□ 3.08
ARFIP2-208ENST00000530410 CUX1P39880 1505 aa34.27■■■■□ 3.08
ARFIP2-208ENST00000530410 EIF4G3O43432 1585 aaKnown RBP34.26■■■■□ 3.07
ARFIP2-208ENST00000530410 RAD54L2Q9Y4B4 1467 aa34.24■■■■□ 3.07
ARFIP2-208ENST00000530410 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.075e-7■■■■□ 21.8
ARFIP2-208ENST00000530410 FGD5Q6ZNL6 1462 aa34.2■■■■□ 3.06
ARFIP2-208ENST00000530410 SOGA1O94964 1423 aa34.17■■■■□ 3.06
ARFIP2-208ENST00000530410 OSCARQ8IYS5 282 aa34.16■■■■□ 3.06
ARFIP2-208ENST00000530410 TDRD9Q8NDG6 1382 aaKnown RBP34.08■■■■□ 3.05
ARFIP2-208ENST00000530410 WDR97A6NE52 1622 aa33.93■■■■□ 3.02
ARFIP2-208ENST00000530410 CHD1O14646 1710 aa33.93■■■■□ 3.02
ARFIP2-208ENST00000530410 SYNJ1O43426 1573 aa33.86■■■■□ 3.01
ARFIP2-208ENST00000530410 FBLN2P98095 1184 aa33.86■■■■□ 3.01
ARFIP2-208ENST00000530410 TRIM41Q8WV44 630 aa33.86■■■■□ 3.01
ARFIP2-208ENST00000530410 WRNQ14191 1432 aaPredicted RBP eCLIP33.85■■■■□ 3.01
ARFIP2-208ENST00000530410 SNAPC4Q5SXM2 1469 aa33.84■■■■□ 3.01
ARFIP2-208ENST00000530410 TOP2BQ02880 1626 aa33.82■■■■□ 3.01
ARFIP2-208ENST00000530410 BIVM-ERCC5R4GMW8 1640 aa33.82■■■■□ 3.01
ARFIP2-208ENST00000530410 ABCA10Q8WWZ4 1543 aa33.79■■■■□ 3
ARFIP2-208ENST00000530410 GRIN2BQ13224 1484 aa33.78■■■■□ 3
ARFIP2-208ENST00000530410 GAPVD1Q14C86 1478 aa33.75■■■□□ 2.99
ARFIP2-208ENST00000530410 PBRM1Q86U86 1689 aa33.74■■■□□ 2.99
ARFIP2-208ENST00000530410 ABCA5Q8WWZ7 1642 aa33.73■■■□□ 2.99
ARFIP2-208ENST00000530410 RIMBP3CA6NJZ7 1639 aa33.72■■■□□ 2.99
ARFIP2-208ENST00000530410 RIMBP3BA6NNM3 1639 aa33.72■■■□□ 2.99
ARFIP2-208ENST00000530410 RIMBP3Q9UFD9 1639 aa33.72■■■□□ 2.99
ARFIP2-208ENST00000530410 MAGI1Q96QZ7 1491 aaPredicted RBP33.71■■■□□ 2.99
ARFIP2-208ENST00000530410 CHMP7Q8WUX9 453 aaPredicted RBP33.65■■■□□ 2.98
ARFIP2-208ENST00000530410 ARHGEF11O15085 1522 aa33.64■■■□□ 2.98
ARFIP2-208ENST00000530410 SYNJ2O15056 1496 aa33.62■■■□□ 2.97
ARFIP2-208ENST00000530410 CLASP1Q7Z460 1538 aa33.51■■■□□ 2.95
ARFIP2-208ENST00000530410 ADAMTS12P58397 1594 aa33.43■■■□□ 2.94
ARFIP2-208ENST00000530410 CYB5RLQ6IPT4 315 aa33.39■■■□□ 2.94
ARFIP2-208ENST00000530410 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
ARFIP2-208ENST00000530410 ERICH3Q5RHP9 1530 aa33.37■■■□□ 2.93
ARFIP2-208ENST00000530410 GRIN2AQ12879 1464 aa33.37■■■□□ 2.93
ARFIP2-208ENST00000530410 FHAD1B1AJZ9 1412 aa33.32■■■□□ 2.92
ARFIP2-208ENST00000530410 CEP170Q5SW79 1584 aa33.27■■■□□ 2.92
ARFIP2-208ENST00000530410 NUP160Q12769 1436 aa33.22■■■□□ 2.91
ARFIP2-208ENST00000530410 KIF27Q86VH2 1401 aa33.14■■■□□ 2.9
ARFIP2-208ENST00000530410 IGF1RP08069 1367 aa33.12■■■□□ 2.89
ARFIP2-208ENST00000530410 ERCC6L2Q5T890 1561 aa33.12■■■□□ 2.89
ARFIP2-208ENST00000530410 SHROOM2Q13796 1616 aa33.04■■■□□ 2.88
ARFIP2-208ENST00000530410 CUL7Q14999 1698 aa32.99■■■□□ 2.87
ARFIP2-208ENST00000530410 RUSC2Q8N2Y8 1516 aa32.96■■■□□ 2.87
ARFIP2-208ENST00000530410 JPH4Q96JJ6 628 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms