RNA–Protein interactions for RNA: ENST00000530410.1

ARFIP2-208, Transcript of ADP ribosylation factor interacting protein 2, humanhuman


Gene ARFIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP2-208ENST00000530410 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.49■□□□□ 0.872e-6■■■■■ 96.1
ARFIP2-208ENST00000530410 SF3B1O75533 1304 aaKnown RBP eCLIP20.99■□□□□ 0.956e-7■■■■■ 71.8
ARFIP2-208ENST00000530410 EFTUD2Q15029 972 aaKnown RBP eCLIP18.14■□□□□ 0.495e-9■■■■■ 69.9
ARFIP2-208ENST00000530410 WDR43Q15061 677 aaKnown RBP eCLIP25.29■■□□□ 1.642e-6■■■■■ 54.5
ARFIP2-208ENST00000530410 SRSF9Q13242 221 aaKnown RBP eCLIP11.83□□□□□ -0.529e-9■■■■■ 28
ARFIP2-208ENST00000530410 U2AF2P26368 475 aaKnown RBP eCLIP21.39■■□□□ 1.016e-6■■■■□ 22.5
ARFIP2-208ENST00000530410 PPIGQ13427 754 aaKnown RBP eCLIP22.08■■□□□ 1.132e-7■■■■□ 22.1
ARFIP2-208ENST00000530410 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.075e-7■■■■□ 21.8
ARFIP2-208ENST00000530410 SRSF1Q07955 248 aaKnown RBP eCLIP18.16■□□□□ 0.57e-10■■■□□ 17.6
ARFIP2-208ENST00000530410 DDX3XO00571 662 aaKnown RBP eCLIP19.59■□□□□ 0.731e-9■■■□□ 17
ARFIP2-208ENST00000530410 HNRNPKP61978 463 aaKnown RBP eCLIP19.28■□□□□ 0.686e-6■■■□□ 16.5
ARFIP2-208ENST00000530410 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.3■□□□□ 0.23e-6■■□□□ 13.5
ARFIP2-208ENST00000530410 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.1■■□□□ 1.133e-8■■□□□ 11.8
ARFIP2-208ENST00000530410 SF3B4Q15427 424 aaKnown RBP eCLIP17.34■□□□□ 0.375e-7■■□□□ 11.6
Retrieved 14 of 14 RNA–protein pairs in 5.8 ms