RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-208ENST00000530085 AEBP2Q6ZN18 517 aaPredicted RBP21.72■■□□□ 1.07
RDX-208ENST00000530085 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
RDX-208ENST00000530085 SENP3Q9H4L4 574 aaPredicted RBP18.42■□□□□ 0.54
RDX-208ENST00000530085 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
RDX-208ENST00000530085 FOXD1Q16676 465 aa17.39■□□□□ 0.37
RDX-208ENST00000530085 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
RDX-208ENST00000530085 MSH5O43196 834 aa16.37■□□□□ 0.21
RDX-208ENST00000530085 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
RDX-208ENST00000530085 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
RDX-208ENST00000530085 ADRA2BP18089 450 aa15.67■□□□□ 0.1
RDX-208ENST00000530085 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
RDX-208ENST00000530085 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
RDX-208ENST00000530085 DMRT2Q9Y5R5 561 aa14.57□□□□□ -0.08
RDX-208ENST00000530085 CACNB1Q02641 598 aaPredicted RBP14.48□□□□□ -0.09
RDX-208ENST00000530085 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
RDX-208ENST00000530085 RNF39Q9H2S5 420 aa14.02□□□□□ -0.17
RDX-208ENST00000530085 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
RDX-208ENST00000530085 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
RDX-208ENST00000530085 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
RDX-208ENST00000530085 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.25
RDX-208ENST00000530085 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
RDX-208ENST00000530085 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
RDX-208ENST00000530085 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
RDX-208ENST00000530085 POTEHQ6S545 545 aa13.35□□□□□ -0.27
RDX-208ENST00000530085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.339e-7■■■■□ 20.1
RDX-208ENST00000530085 DSG3P32926 999 aa12.9□□□□□ -0.34
RDX-208ENST00000530085 SPINK5Q9NQ38 1064 aaPredicted RBP12.84□□□□□ -0.35
RDX-208ENST00000530085 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
RDX-208ENST00000530085 CAPN15O75808 1086 aa12.71□□□□□ -0.37
RDX-208ENST00000530085 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
RDX-208ENST00000530085 NPM3O75607 178 aaKnown RBP12.64□□□□□ -0.39
RDX-208ENST00000530085 ABCB7O75027 752 aa12.43□□□□□ -0.42
RDX-208ENST00000530085 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
RDX-208ENST00000530085 SLC4A2P04920 1241 aa12.33□□□□□ -0.44
RDX-208ENST00000530085 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
RDX-208ENST00000530085 KCNA4P22459 653 aa12.26□□□□□ -0.45
RDX-208ENST00000530085 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
RDX-208ENST00000530085 SP7Q8TDD2 431 aaPredicted RBP12.18□□□□□ -0.46
RDX-208ENST00000530085 RBM42Q9BTD8 480 aaKnown RBP12.16□□□□□ -0.46
RDX-208ENST00000530085 APLP2Q06481 763 aa12.09□□□□□ -0.47
RDX-208ENST00000530085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.99□□□□□ -0.49
RDX-208ENST00000530085 HNRNPUL2Q1KMD3 747 aaKnown RBP11.99□□□□□ -0.49
RDX-208ENST00000530085 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
RDX-208ENST00000530085 POLA2Q14181 598 aa11.91□□□□□ -0.5
RDX-208ENST00000530085 EHMT2Q96KQ7 1210 aa11.9□□□□□ -0.5
RDX-208ENST00000530085 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
RDX-208ENST00000530085 AKT1S1Q96B36 256 aa11.81□□□□□ -0.52
RDX-208ENST00000530085 EVX2Q03828 476 aa11.77□□□□□ -0.53
RDX-208ENST00000530085 REM2Q8IYK8 340 aaPredicted RBP11.77□□□□□ -0.53
RDX-208ENST00000530085 HAX1O00165 279 aa11.76□□□□□ -0.53
RDX-208ENST00000530085 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
RDX-208ENST00000530085 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.541e-12■□□□□ 10.8
RDX-208ENST00000530085 PITPNM1O00562 1244 aa11.66□□□□□ -0.54
RDX-208ENST00000530085 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
RDX-208ENST00000530085 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
RDX-208ENST00000530085 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
RDX-208ENST00000530085 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
RDX-208ENST00000530085 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
RDX-208ENST00000530085 LHX8Q68G74 356 aa11.4□□□□□ -0.58
RDX-208ENST00000530085 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
RDX-208ENST00000530085 GABBR2O75899 941 aa11.35□□□□□ -0.59
RDX-208ENST00000530085 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
RDX-208ENST00000530085 ZBTB22O15209 634 aa11.29□□□□□ -0.6
RDX-208ENST00000530085 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
RDX-208ENST00000530085 PLSCR2Q9NRY7 297 aa11.2□□□□□ -0.62
RDX-208ENST00000530085 SPDYE2BA6NHP3 402 aa11.15□□□□□ -0.62
RDX-208ENST00000530085 SPDYE6P0CI01 402 aa11.15□□□□□ -0.62
RDX-208ENST00000530085 SPDYE2Q495Y8 402 aa11.15□□□□□ -0.62
RDX-208ENST00000530085 FOXD4L1Q9NU39 408 aa11.15□□□□□ -0.62
RDX-208ENST00000530085 CLEC11AQ9Y240 323 aa11.12□□□□□ -0.63
RDX-208ENST00000530085 CHADLQ6NUI6 762 aa11.09□□□□□ -0.63
RDX-208ENST00000530085 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
RDX-208ENST00000530085 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
RDX-208ENST00000530085 SSUH2Q9Y2M2 353 aa11.01□□□□□ -0.65
RDX-208ENST00000530085 FBLN2P98095 1184 aa10.92□□□□□ -0.66
RDX-208ENST00000530085 ZNF692Q9BU19 519 aaPredicted RBP10.9□□□□□ -0.66
RDX-208ENST00000530085 CD44P16070 742 aaKnown RBP10.89□□□□□ -0.67
RDX-208ENST00000530085 OTUD5Q96G74 571 aa10.86□□□□□ -0.67
RDX-208ENST00000530085 ATXN8OSP0DMR3 200 aa10.84□□□□□ -0.67
RDX-208ENST00000530085 POTEB2H3BUK9 544 aa10.83□□□□□ -0.68
RDX-208ENST00000530085 PRR29P0C7W0 189 aa10.83□□□□□ -0.68
RDX-208ENST00000530085 FARP1Q9Y4F1 1045 aaPredicted RBP10.82□□□□□ -0.68
RDX-208ENST00000530085 POTEMA6NI47 508 aa10.78□□□□□ -0.68
RDX-208ENST00000530085 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
RDX-208ENST00000530085 DCBLD2Q96PD2 775 aa10.77□□□□□ -0.69
RDX-208ENST00000530085 CLCN6P51797 869 aa10.75□□□□□ -0.69
RDX-208ENST00000530085 POTEGQ6S5H5 508 aa10.74□□□□□ -0.69
RDX-208ENST00000530085 ZNF579Q8NAF0 562 aaKnown RBP10.72□□□□□ -0.69
RDX-208ENST00000530085 GALR2O43603 387 aaPredicted RBP10.68□□□□□ -0.7
RDX-208ENST00000530085 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
RDX-208ENST00000530085 PELP1Q8IZL8 1130 aaKnown RBP10.61□□□□□ -0.71
RDX-208ENST00000530085 LCE2DQ5TA82 110 aaPredicted RBP10.6□□□□□ -0.71
RDX-208ENST00000530085 POTEJP0CG39 1038 aa10.59□□□□□ -0.71
RDX-208ENST00000530085 PCDH10Q9P2E7 1040 aa10.54□□□□□ -0.72
RDX-208ENST00000530085 CREBZFQ9NS37 354 aa10.53□□□□□ -0.72
RDX-208ENST00000530085 PHF12Q96QT6 1004 aa10.5□□□□□ -0.73
RDX-208ENST00000530085 FKBP8Q14318 412 aa10.43□□□□□ -0.74
RDX-208ENST00000530085 METRNQ9UJH8 293 aa10.4□□□□□ -0.74
RDX-208ENST00000530085 ASTLQ6HA08 431 aaPredicted RBP10.39□□□□□ -0.75
RDX-208ENST00000530085 ATMINO43313 823 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms