RNA–Protein interactions for RNA: ENST00000529539.5

CHID1-216, Transcript of chitinase domain containing 1, humanhuman

TSL 2

Gene CHID1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-216ENST00000529539 NISCHQ9Y2I1 1504 aa52.76■■■■■ 6.04
CHID1-216ENST00000529539 CCDC180Q9P1Z9 1646 aa47.19■■■■■ 5.14
CHID1-216ENST00000529539 ABCC9O60706 1549 aa46.56■■■■■ 5.04
CHID1-216ENST00000529539 RB1CC1Q8TDY2 1594 aa44.66■■■■■ 4.74
CHID1-216ENST00000529539 NACADO15069 1562 aa44.51■■■■■ 4.72
CHID1-216ENST00000529539 MYO15BQ96JP2 1530 aa44.15■■■■■ 4.66
CHID1-216ENST00000529539 DCAF8L2P0C7V8 631 aa44.15■■■■■ 4.66
CHID1-216ENST00000529539 ZCCHC6Q5VYS8 1495 aaKnown RBP43.83■■■■■ 4.61
CHID1-216ENST00000529539 DCAF1Q9Y4B6 1507 aa43.73■■■■■ 4.59
CHID1-216ENST00000529539 UNC13AQ9UPW8 1703 aa43.55■■■■■ 4.56
CHID1-216ENST00000529539 PABPN1Q86U42 306 aaKnown RBP eCLIP43.38■■■■■ 4.53
CHID1-216ENST00000529539 BICRAQ9NZM4 1560 aa43.29■■■■■ 4.52
CHID1-216ENST00000529539 DNAJC5BQ9UF47 199 aa43.24■■■■■ 4.51
CHID1-216ENST00000529539 SHROOM4Q9ULL8 1493 aa42.95■■■■■ 4.47
CHID1-216ENST00000529539 SCRIBQ14160 1630 aa42.86■■■■■ 4.45
CHID1-216ENST00000529539 EIF4G1Q04637 1599 aaKnown RBP42.19■■■■■ 4.34
CHID1-216ENST00000529539 CC2D2AQ9P2K1 1620 aa42.13■■■■■ 4.34
CHID1-216ENST00000529539 CECR2Q9BXF3 1484 aa41.96■■■■■ 4.31
CHID1-216ENST00000529539 NCAPD3P42695 1498 aa41.09■■■■■ 4.17
CHID1-216ENST00000529539 SMARCA4P51532 1647 aa41.03■■■■■ 4.16
CHID1-216ENST00000529539 ATAD2BQ9ULI0 1458 aa40.96■■■■■ 4.15
CHID1-216ENST00000529539 BAZ1AQ9NRL2 1556 aaPredicted RBP40.95■■■■■ 4.15
CHID1-216ENST00000529539 SMARCA2P51531 1590 aa40.93■■■■■ 4.14
CHID1-216ENST00000529539 HMGXB3Q12766 1538 aa40.82■■■■■ 4.12
CHID1-216ENST00000529539 PEG3Q9GZU2 1588 aa40.72■■■■■ 4.11
CHID1-216ENST00000529539 BAZ1BQ9UIG0 1483 aaKnown RBP40.58■■■■■ 4.09
CHID1-216ENST00000529539 MROH2BQ7Z745 1585 aa40.58■■■■■ 4.09
CHID1-216ENST00000529539 ERCC6Q03468 1493 aa40.21■■■■■ 4.03
CHID1-216ENST00000529539 NESP48681 1621 aa40.12■■■■■ 4.01
CHID1-216ENST00000529539 CUX2O14529 1486 aa40.09■■■■■ 4.01
CHID1-216ENST00000529539 WIZO95785 1651 aa40.08■■■■■ 4.01
CHID1-216ENST00000529539 LAMC3Q9Y6N6 1575 aa40.07■■■■■ 4.01
CHID1-216ENST00000529539 RSF1Q96T23 1441 aaPredicted RBP39.96■■■■□ 3.99
CHID1-216ENST00000529539 CADPSQ9ULU8 1353 aa39.83■■■■□ 3.97
CHID1-216ENST00000529539 PDS5BQ9NTI5 1447 aa39.82■■■■□ 3.97
CHID1-216ENST00000529539 TOP2AP11388 1531 aaKnown RBP39.7■■■■□ 3.95
CHID1-216ENST00000529539 THOC2Q8NI27 1593 aaKnown RBP39.69■■■■□ 3.94
CHID1-216ENST00000529539 KIF21AQ7Z4S6 1674 aa39.64■■■■□ 3.94
CHID1-216ENST00000529539 DNAJC5Q9H3Z4 198 aa39.48■■■■□ 3.91
CHID1-216ENST00000529539 CFTRP13569 1480 aa39.48■■■■□ 3.91
CHID1-216ENST00000529539 MRC2Q9UBG0 1479 aa39.4■■■■□ 3.9
CHID1-216ENST00000529539 CEP164Q9UPV0 1460 aa39.34■■■■□ 3.89
CHID1-216ENST00000529539 FANCD2Q9BXW9 1451 aa39.33■■■■□ 3.89
CHID1-216ENST00000529539 WDR62O43379 1518 aa39.3■■■■□ 3.88
CHID1-216ENST00000529539 CCDC88BA6NC98 1476 aa39.22■■■■□ 3.87
CHID1-216ENST00000529539 PRDM2Q13029 1718 aa39.1■■■■□ 3.85
CHID1-216ENST00000529539 URB2Q14146 1524 aaKnown RBP38.95■■■■□ 3.83
CHID1-216ENST00000529539 ABCC8Q09428 1581 aa38.71■■■■□ 3.79
CHID1-216ENST00000529539 TOPBP1Q92547 1522 aa38.63■■■■□ 3.78
CHID1-216ENST00000529539 IFT140Q96RY7 1462 aa38.57■■■■□ 3.76
CHID1-216ENST00000529539 DNMBPQ6XZF7 1577 aa38.56■■■■□ 3.76
CHID1-216ENST00000529539 SUPT5HO00267 1087 aaKnown RBP38.4■■■■□ 3.74
CHID1-216ENST00000529539 ZNF608Q9ULD9 1512 aaPredicted RBP38.35■■■■□ 3.73
CHID1-216ENST00000529539 OSCARQ8IYS5 282 aa38.29■■■■□ 3.72
CHID1-216ENST00000529539 POLA1P09884 1462 aaPredicted RBP38.27■■■■□ 3.72
CHID1-216ENST00000529539 TARBP1Q13395 1621 aaKnown RBP38.27■■■■□ 3.72
CHID1-216ENST00000529539 EIF4G3O43432 1585 aaKnown RBP38.2■■■■□ 3.71
CHID1-216ENST00000529539 CUX1P39880 1505 aa38.12■■■■□ 3.69
CHID1-216ENST00000529539 SOGA1O94964 1423 aa38.11■■■■□ 3.69
CHID1-216ENST00000529539 AQRO60306 1485 aaKnown RBP eCLIP38.08■■■■□ 3.69
CHID1-216ENST00000529539 FGD5Q6ZNL6 1462 aa38.08■■■■□ 3.69
CHID1-216ENST00000529539 RAD54L2Q9Y4B4 1467 aa38.05■■■■□ 3.68
CHID1-216ENST00000529539 WDR97A6NE52 1622 aa38.04■■■■□ 3.68
CHID1-216ENST00000529539 TDRD9Q8NDG6 1382 aaKnown RBP37.92■■■■□ 3.66
CHID1-216ENST00000529539 CHD1O14646 1710 aa37.79■■■■□ 3.64
CHID1-216ENST00000529539 TRIM41Q8WV44 630 aa37.78■■■■□ 3.64
CHID1-216ENST00000529539 GRIN2BQ13224 1484 aa37.76■■■■□ 3.63
CHID1-216ENST00000529539 ABCA10Q8WWZ4 1543 aa37.74■■■■□ 3.63
CHID1-216ENST00000529539 MAGI1Q96QZ7 1491 aaPredicted RBP37.74■■■■□ 3.63
CHID1-216ENST00000529539 SNAPC4Q5SXM2 1469 aa37.72■■■■□ 3.63
CHID1-216ENST00000529539 WRNQ14191 1432 aaPredicted RBP eCLIP37.7■■■■□ 3.62
CHID1-216ENST00000529539 FBLN2P98095 1184 aa37.69■■■■□ 3.62
CHID1-216ENST00000529539 TOP2BQ02880 1626 aa37.69■■■■□ 3.62
CHID1-216ENST00000529539 RIMBP3CA6NJZ7 1639 aa37.68■■■■□ 3.62
CHID1-216ENST00000529539 RIMBP3BA6NNM3 1639 aa37.68■■■■□ 3.62
CHID1-216ENST00000529539 RIMBP3Q9UFD9 1639 aa37.68■■■■□ 3.62
CHID1-216ENST00000529539 BIVM-ERCC5R4GMW8 1640 aa37.68■■■■□ 3.62
CHID1-216ENST00000529539 GAPVD1Q14C86 1478 aa37.66■■■■□ 3.62
CHID1-216ENST00000529539 ARHGEF11O15085 1522 aa37.63■■■■□ 3.61
CHID1-216ENST00000529539 ABCA5Q8WWZ7 1642 aa37.61■■■■□ 3.61
CHID1-216ENST00000529539 CHMP7Q8WUX9 453 aaPredicted RBP37.58■■■■□ 3.61
CHID1-216ENST00000529539 SYNJ2O15056 1496 aa37.58■■■■□ 3.61
CHID1-216ENST00000529539 PBRM1Q86U86 1689 aa37.57■■■■□ 3.61
CHID1-216ENST00000529539 SYNJ1O43426 1573 aa37.57■■■■□ 3.6
CHID1-216ENST00000529539 CLASP1Q7Z460 1538 aa37.45■■■■□ 3.59
CHID1-216ENST00000529539 ERICH3Q5RHP9 1530 aa37.3■■■■□ 3.56
CHID1-216ENST00000529539 ARAP1Q96P48 1450 aa37.28■■■■□ 3.56
CHID1-216ENST00000529539 CYB5RLQ6IPT4 315 aa37.28■■■■□ 3.56
CHID1-216ENST00000529539 ADAMTS12P58397 1594 aa37.27■■■■□ 3.56
CHID1-216ENST00000529539 GRIN2AQ12879 1464 aa37.26■■■■□ 3.55
CHID1-216ENST00000529539 FHAD1B1AJZ9 1412 aa37.24■■■■□ 3.55
CHID1-216ENST00000529539 NUP160Q12769 1436 aa37.14■■■■□ 3.54
CHID1-216ENST00000529539 CEP170Q5SW79 1584 aa37.05■■■■□ 3.52
CHID1-216ENST00000529539 KIF27Q86VH2 1401 aa36.98■■■■□ 3.51
CHID1-216ENST00000529539 SHROOM2Q13796 1616 aa36.92■■■■□ 3.5
CHID1-216ENST00000529539 IGF1RP08069 1367 aa36.89■■■■□ 3.5
CHID1-216ENST00000529539 CUL7Q14999 1698 aa36.83■■■■□ 3.49
CHID1-216ENST00000529539 ERCC6L2Q5T890 1561 aa36.78■■■■□ 3.48
CHID1-216ENST00000529539 RUSC2Q8N2Y8 1516 aa36.74■■■■□ 3.47
CHID1-216ENST00000529539 JPH4Q96JJ6 628 aa36.73■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms