RNA–Protein interactions for RNA: ENST00000529187.1

TMEM136-204, Transcript of transmembrane protein 136, humanhuman

TSL 1 (best) BASIC

Gene TMEM136, Length 3,930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM136-204ENST00000529187 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
TMEM136-204ENST00000529187 CCDC180Q9P1Z9 1646 aa18.96■□□□□ 0.63
TMEM136-204ENST00000529187 ABCC9O60706 1549 aa18.89■□□□□ 0.61
TMEM136-204ENST00000529187 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
TMEM136-204ENST00000529187 RB1CC1Q8TDY2 1594 aa18.03■□□□□ 0.48
TMEM136-204ENST00000529187 NACADO15069 1562 aa17.94■□□□□ 0.46
TMEM136-204ENST00000529187 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
TMEM136-204ENST00000529187 ZCCHC6Q5VYS8 1495 aaKnown RBP17.67■□□□□ 0.42
TMEM136-204ENST00000529187 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
TMEM136-204ENST00000529187 DCAF1Q9Y4B6 1507 aa17.56■□□□□ 0.4
TMEM136-204ENST00000529187 DNAJC5BQ9UF47 199 aa17.49■□□□□ 0.39
TMEM136-204ENST00000529187 UNC13AQ9UPW8 1703 aa17.48■□□□□ 0.39
TMEM136-204ENST00000529187 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
TMEM136-204ENST00000529187 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
TMEM136-204ENST00000529187 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
TMEM136-204ENST00000529187 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.32
TMEM136-204ENST00000529187 CC2D2AQ9P2K1 1620 aa17■□□□□ 0.31
TMEM136-204ENST00000529187 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
TMEM136-204ENST00000529187 NCAPD3P42695 1498 aa16.56■□□□□ 0.24
TMEM136-204ENST00000529187 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
TMEM136-204ENST00000529187 SMARCA4P51532 1647 aa16.54■□□□□ 0.24
TMEM136-204ENST00000529187 BAZ1AQ9NRL2 1556 aaPredicted RBP16.54■□□□□ 0.24
TMEM136-204ENST00000529187 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
TMEM136-204ENST00000529187 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
TMEM136-204ENST00000529187 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
TMEM136-204ENST00000529187 MROH2BQ7Z745 1585 aa16.4■□□□□ 0.22
TMEM136-204ENST00000529187 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
TMEM136-204ENST00000529187 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
TMEM136-204ENST00000529187 NESP48681 1621 aa16.24■□□□□ 0.19
TMEM136-204ENST00000529187 WIZO95785 1651 aa16.19■□□□□ 0.18
TMEM136-204ENST00000529187 CUX2O14529 1486 aa16.17■□□□□ 0.18
TMEM136-204ENST00000529187 RSF1Q96T23 1441 aaPredicted RBP16.16■□□□□ 0.18
TMEM136-204ENST00000529187 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
TMEM136-204ENST00000529187 PDS5BQ9NTI5 1447 aa16.13■□□□□ 0.17
TMEM136-204ENST00000529187 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
TMEM136-204ENST00000529187 TOP2AP11388 1531 aaKnown RBP16.03■□□□□ 0.16
TMEM136-204ENST00000529187 DNAJC5Q9H3Z4 198 aa15.98■□□□□ 0.15
TMEM136-204ENST00000529187 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
TMEM136-204ENST00000529187 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
TMEM136-204ENST00000529187 MRC2Q9UBG0 1479 aa15.94■□□□□ 0.14
TMEM136-204ENST00000529187 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
TMEM136-204ENST00000529187 CFTRP13569 1480 aa15.93■□□□□ 0.14
TMEM136-204ENST00000529187 FANCD2Q9BXW9 1451 aa15.92■□□□□ 0.14
TMEM136-204ENST00000529187 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
TMEM136-204ENST00000529187 WDR62O43379 1518 aa15.83■□□□□ 0.12
TMEM136-204ENST00000529187 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
TMEM136-204ENST00000529187 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
TMEM136-204ENST00000529187 PRDM2Q13029 1718 aa15.69■□□□□ 0.1
TMEM136-204ENST00000529187 ABCC8Q09428 1581 aa15.64■□□□□ 0.09
TMEM136-204ENST00000529187 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
TMEM136-204ENST00000529187 IFT140Q96RY7 1462 aa15.6■□□□□ 0.09
TMEM136-204ENST00000529187 DNMBPQ6XZF7 1577 aa15.57■□□□□ 0.08
TMEM136-204ENST00000529187 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
TMEM136-204ENST00000529187 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.08
TMEM136-204ENST00000529187 POLA1P09884 1462 aaPredicted RBP15.47■□□□□ 0.07
TMEM136-204ENST00000529187 SOGA1O94964 1423 aa15.46■□□□□ 0.07
TMEM136-204ENST00000529187 TRIM41Q8WV44 630 aa15.46■□□□□ 0.06
TMEM136-204ENST00000529187 AQRO60306 1485 aaKnown RBP eCLIP15.44■□□□□ 0.06
TMEM136-204ENST00000529187 FBLN2P98095 1184 aa15.44■□□□□ 0.06
TMEM136-204ENST00000529187 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
TMEM136-204ENST00000529187 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
TMEM136-204ENST00000529187 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
TMEM136-204ENST00000529187 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
TMEM136-204ENST00000529187 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
TMEM136-204ENST00000529187 CUX1P39880 1505 aa15.39■□□□□ 0.05
TMEM136-204ENST00000529187 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.04
TMEM136-204ENST00000529187 WRNQ14191 1432 aaPredicted RBP eCLIP15.3■□□□□ 0.04
TMEM136-204ENST00000529187 GRIN2BQ13224 1484 aa15.29■□□□□ 0.04
TMEM136-204ENST00000529187 SNAPC4Q5SXM2 1469 aa15.28■□□□□ 0.04
TMEM136-204ENST00000529187 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
TMEM136-204ENST00000529187 GAPVD1Q14C86 1478 aa15.26■□□□□ 0.03
TMEM136-204ENST00000529187 MAGI1Q96QZ7 1491 aaPredicted RBP15.25■□□□□ 0.03
TMEM136-204ENST00000529187 CHD1O14646 1710 aa15.24■□□□□ 0.03
TMEM136-204ENST00000529187 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
TMEM136-204ENST00000529187 ARHGEF11O15085 1522 aa15.21■□□□□ 0.03
TMEM136-204ENST00000529187 CYB5RLQ6IPT4 315 aa15.21■□□□□ 0.02
TMEM136-204ENST00000529187 RIMBP3CA6NJZ7 1639 aa15.2■□□□□ 0.02
TMEM136-204ENST00000529187 RIMBP3BA6NNM3 1639 aa15.2■□□□□ 0.02
TMEM136-204ENST00000529187 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
TMEM136-204ENST00000529187 RIMBP3Q9UFD9 1639 aa15.2■□□□□ 0.02
TMEM136-204ENST00000529187 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
TMEM136-204ENST00000529187 SYNJ1O43426 1573 aa15.18■□□□□ 0.02
TMEM136-204ENST00000529187 BIVM-ERCC5R4GMW8 1640 aa15.17■□□□□ 0.02
TMEM136-204ENST00000529187 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
TMEM136-204ENST00000529187 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
TMEM136-204ENST00000529187 FHAD1B1AJZ9 1412 aa15.08■□□□□ 0
TMEM136-204ENST00000529187 CLASP1Q7Z460 1538 aa15.07■□□□□ 0
TMEM136-204ENST00000529187 GRIN2AQ12879 1464 aa15.07■□□□□ 0
TMEM136-204ENST00000529187 ARAP1Q96P48 1450 aa15.06■□□□□ 0
TMEM136-204ENST00000529187 ERICH3Q5RHP9 1530 aa15.05■□□□□ -0
TMEM136-204ENST00000529187 ADAMTS12P58397 1594 aa15.04■□□□□ -0
TMEM136-204ENST00000529187 TRHP20396 242 aaPredicted RBP15.03■□□□□ -0
TMEM136-204ENST00000529187 KIF27Q86VH2 1401 aa15.02□□□□□ -0.01
TMEM136-204ENST00000529187 NUP160Q12769 1436 aa14.99□□□□□ -0.01
TMEM136-204ENST00000529187 CEP170Q5SW79 1584 aa14.95□□□□□ -0.02
TMEM136-204ENST00000529187 IGF1RP08069 1367 aa14.94□□□□□ -0.02
TMEM136-204ENST00000529187 JPH4Q96JJ6 628 aa14.93□□□□□ -0.02
TMEM136-204ENST00000529187 PRG4Q92954 1404 aaPredicted RBP14.89□□□□□ -0.03
TMEM136-204ENST00000529187 CARMIL1Q5VZK9 1371 aa14.89□□□□□ -0.03
TMEM136-204ENST00000529187 ERCC6L2Q5T890 1561 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms