RNA–Protein interactions for RNA: ENST00000529180.1

VPS51-207, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 1,027 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-207ENST00000529180 NISCHQ9Y2I1 1504 aa52.81■■■■■ 6.04
VPS51-207ENST00000529180 CCDC180Q9P1Z9 1646 aa47.05■■■■■ 5.12
VPS51-207ENST00000529180 ABCC9O60706 1549 aa46.5■■■■■ 5.03
VPS51-207ENST00000529180 RB1CC1Q8TDY2 1594 aa44.54■■■■■ 4.72
VPS51-207ENST00000529180 NACADO15069 1562 aa44.42■■■■■ 4.7
VPS51-207ENST00000529180 DCAF8L2P0C7V8 631 aa44.36■■■■■ 4.69
VPS51-207ENST00000529180 MYO15BQ96JP2 1530 aa44.04■■■■■ 4.64
VPS51-207ENST00000529180 ZCCHC6Q5VYS8 1495 aaKnown RBP43.89■■■■■ 4.62
VPS51-207ENST00000529180 DCAF1Q9Y4B6 1507 aa43.69■■■■■ 4.59
VPS51-207ENST00000529180 PABPN1Q86U42 306 aaKnown RBP eCLIP43.44■■■■■ 4.54
VPS51-207ENST00000529180 UNC13AQ9UPW8 1703 aa43.39■■■■■ 4.54
VPS51-207ENST00000529180 BICRAQ9NZM4 1560 aa43.18■■■■■ 4.5
VPS51-207ENST00000529180 DNAJC5BQ9UF47 199 aa43.11■■■■■ 4.49
VPS51-207ENST00000529180 SCRIBQ14160 1630 aa42.9■■■■■ 4.46
VPS51-207ENST00000529180 SHROOM4Q9ULL8 1493 aa42.75■■■■■ 4.43
VPS51-207ENST00000529180 EIF4G1Q04637 1599 aaKnown RBP42.1■■■■■ 4.33
VPS51-207ENST00000529180 CC2D2AQ9P2K1 1620 aa42.01■■■■■ 4.32
VPS51-207ENST00000529180 CECR2Q9BXF3 1484 aa41.85■■■■■ 4.29
VPS51-207ENST00000529180 NCAPD3P42695 1498 aa41.03■■■■■ 4.16
VPS51-207ENST00000529180 SMARCA4P51532 1647 aa41.01■■■■■ 4.16
VPS51-207ENST00000529180 ATAD2BQ9ULI0 1458 aa40.96■■■■■ 4.15
VPS51-207ENST00000529180 BAZ1AQ9NRL2 1556 aaPredicted RBP40.95■■■■■ 4.15
VPS51-207ENST00000529180 SMARCA2P51531 1590 aa40.88■■■■■ 4.13
VPS51-207ENST00000529180 HMGXB3Q12766 1538 aa40.72■■■■■ 4.11
VPS51-207ENST00000529180 MROH2BQ7Z745 1585 aa40.67■■■■■ 4.1
VPS51-207ENST00000529180 PEG3Q9GZU2 1588 aa40.65■■■■■ 4.1
VPS51-207ENST00000529180 BAZ1BQ9UIG0 1483 aaKnown RBP40.59■■■■■ 4.09
VPS51-207ENST00000529180 WIZO95785 1651 aa40.16■■■■■ 4.02
VPS51-207ENST00000529180 ERCC6Q03468 1493 aa40.13■■■■■ 4.02
VPS51-207ENST00000529180 RSF1Q96T23 1441 aaPredicted RBP40.1■■■■■ 4.01
VPS51-207ENST00000529180 NESP48681 1621 aa40.1■■■■■ 4.01
VPS51-207ENST00000529180 LAMC3Q9Y6N6 1575 aa39.96■■■■□ 3.99
VPS51-207ENST00000529180 CUX2O14529 1486 aa39.87■■■■□ 3.97
VPS51-207ENST00000529180 CADPSQ9ULU8 1353 aa39.82■■■■□ 3.96
VPS51-207ENST00000529180 PDS5BQ9NTI5 1447 aa39.77■■■■□ 3.96
VPS51-207ENST00000529180 TOP2AP11388 1531 aaKnown RBP39.75■■■■□ 3.95
VPS51-207ENST00000529180 THOC2Q8NI27 1593 aaKnown RBP39.54■■■■□ 3.92
VPS51-207ENST00000529180 KIF21AQ7Z4S6 1674 aa39.53■■■■□ 3.92
VPS51-207ENST00000529180 CFTRP13569 1480 aa39.48■■■■□ 3.91
VPS51-207ENST00000529180 MRC2Q9UBG0 1479 aa39.34■■■■□ 3.89
VPS51-207ENST00000529180 CCDC88BA6NC98 1476 aa39.32■■■■□ 3.89
VPS51-207ENST00000529180 FANCD2Q9BXW9 1451 aa39.32■■■■□ 3.89
VPS51-207ENST00000529180 CEP164Q9UPV0 1460 aa39.3■■■■□ 3.88
VPS51-207ENST00000529180 WDR62O43379 1518 aa39.2■■■■□ 3.87
VPS51-207ENST00000529180 DNAJC5Q9H3Z4 198 aa39.19■■■■□ 3.86
VPS51-207ENST00000529180 PRDM2Q13029 1718 aa38.97■■■■□ 3.83
VPS51-207ENST00000529180 URB2Q14146 1524 aaKnown RBP38.94■■■■□ 3.82
VPS51-207ENST00000529180 SUPT5HO00267 1087 aaKnown RBP38.8■■■■□ 3.8
VPS51-207ENST00000529180 ABCC8Q09428 1581 aa38.65■■■■□ 3.78
VPS51-207ENST00000529180 TOPBP1Q92547 1522 aa38.63■■■■□ 3.78
VPS51-207ENST00000529180 DNMBPQ6XZF7 1577 aa38.53■■■■□ 3.76
VPS51-207ENST00000529180 IFT140Q96RY7 1462 aa38.53■■■■□ 3.76
VPS51-207ENST00000529180 ZNF608Q9ULD9 1512 aaPredicted RBP38.35■■■■□ 3.73
VPS51-207ENST00000529180 POLA1P09884 1462 aaPredicted RBP38.28■■■■□ 3.72
VPS51-207ENST00000529180 TARBP1Q13395 1621 aaKnown RBP38.21■■■■□ 3.71
VPS51-207ENST00000529180 OSCARQ8IYS5 282 aa38.21■■■■□ 3.71
VPS51-207ENST00000529180 CUX1P39880 1505 aa38.17■■■■□ 3.7
VPS51-207ENST00000529180 SOGA1O94964 1423 aa38.17■■■■□ 3.7
VPS51-207ENST00000529180 EIF4G3O43432 1585 aaKnown RBP38.13■■■■□ 3.69
VPS51-207ENST00000529180 FGD5Q6ZNL6 1462 aa38.12■■■■□ 3.69
VPS51-207ENST00000529180 RAD54L2Q9Y4B4 1467 aa38.12■■■■□ 3.69
VPS51-207ENST00000529180 AQRO60306 1485 aaKnown RBP eCLIP38.1■■■■□ 3.693e-7■■■■□ 21.2
VPS51-207ENST00000529180 TDRD9Q8NDG6 1382 aaKnown RBP37.99■■■■□ 3.67
VPS51-207ENST00000529180 WDR97A6NE52 1622 aa37.91■■■■□ 3.66
VPS51-207ENST00000529180 WRNQ14191 1432 aaPredicted RBP eCLIP37.83■■■■□ 3.65
VPS51-207ENST00000529180 FBLN2P98095 1184 aa37.77■■■■□ 3.64
VPS51-207ENST00000529180 GRIN2BQ13224 1484 aa37.75■■■■□ 3.63
VPS51-207ENST00000529180 ABCA10Q8WWZ4 1543 aa37.75■■■■□ 3.63
VPS51-207ENST00000529180 TOP2BQ02880 1626 aa37.72■■■■□ 3.63
VPS51-207ENST00000529180 SNAPC4Q5SXM2 1469 aa37.72■■■■□ 3.63
VPS51-207ENST00000529180 BIVM-ERCC5R4GMW8 1640 aa37.69■■■■□ 3.62
VPS51-207ENST00000529180 GAPVD1Q14C86 1478 aa37.69■■■■□ 3.62
VPS51-207ENST00000529180 MAGI1Q96QZ7 1491 aaPredicted RBP37.69■■■■□ 3.62
VPS51-207ENST00000529180 TRIM41Q8WV44 630 aa37.68■■■■□ 3.62
VPS51-207ENST00000529180 SYNJ1O43426 1573 aa37.68■■■■□ 3.62
VPS51-207ENST00000529180 CHD1O14646 1710 aa37.67■■■■□ 3.62
VPS51-207ENST00000529180 CHMP7Q8WUX9 453 aaPredicted RBP37.63■■■■□ 3.61
VPS51-207ENST00000529180 ABCA5Q8WWZ7 1642 aa37.58■■■■□ 3.61
VPS51-207ENST00000529180 SYNJ2O15056 1496 aa37.55■■■■□ 3.6
VPS51-207ENST00000529180 PBRM1Q86U86 1689 aa37.5■■■■□ 3.59
VPS51-207ENST00000529180 ARHGEF11O15085 1522 aa37.5■■■■□ 3.59
VPS51-207ENST00000529180 RIMBP3CA6NJZ7 1639 aa37.5■■■■□ 3.59
VPS51-207ENST00000529180 RIMBP3BA6NNM3 1639 aa37.5■■■■□ 3.59
VPS51-207ENST00000529180 RIMBP3Q9UFD9 1639 aa37.5■■■■□ 3.59
VPS51-207ENST00000529180 CLASP1Q7Z460 1538 aa37.35■■■■□ 3.57
VPS51-207ENST00000529180 ERICH3Q5RHP9 1530 aa37.29■■■■□ 3.56
VPS51-207ENST00000529180 FHAD1B1AJZ9 1412 aa37.26■■■■□ 3.55
VPS51-207ENST00000529180 CYB5RLQ6IPT4 315 aa37.25■■■■□ 3.55
VPS51-207ENST00000529180 ADAMTS12P58397 1594 aa37.25■■■■□ 3.55
VPS51-207ENST00000529180 GRIN2AQ12879 1464 aa37.24■■■■□ 3.55
VPS51-207ENST00000529180 ARAP1Q96P48 1450 aa37.16■■■■□ 3.54
VPS51-207ENST00000529180 NUP160Q12769 1436 aa37.11■■■■□ 3.53
VPS51-207ENST00000529180 KIF27Q86VH2 1401 aa37.09■■■■□ 3.53
VPS51-207ENST00000529180 CEP170Q5SW79 1584 aa37.04■■■■□ 3.52
VPS51-207ENST00000529180 IGF1RP08069 1367 aa37■■■■□ 3.51
VPS51-207ENST00000529180 CUL7Q14999 1698 aa36.82■■■■□ 3.48
VPS51-207ENST00000529180 SHROOM2Q13796 1616 aa36.81■■■■□ 3.48
VPS51-207ENST00000529180 JPH4Q96JJ6 628 aa36.79■■■■□ 3.48
VPS51-207ENST00000529180 ERCC6L2Q5T890 1561 aa36.78■■■■□ 3.48
VPS51-207ENST00000529180 CARMIL1Q5VZK9 1371 aa36.77■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms