RNA–Protein interactions for RNA: ENST00000528265.1

SPCS2-206, Transcript of signal peptidase complex subunit 2, humanhuman

TSL 5

Gene SPCS2, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS2-206ENST00000528265 AEBP2Q6ZN18 517 aaPredicted RBP29.51■■■□□ 2.31
SPCS2-206ENST00000528265 CHIC1Q5VXU3 224 aa28.64■■■□□ 2.18
SPCS2-206ENST00000528265 PHF23Q9BUL5 403 aaPredicted RBP25.17■■□□□ 1.62
SPCS2-206ENST00000528265 SENP3Q9H4L4 574 aaPredicted RBP25.04■■□□□ 1.6
SPCS2-206ENST00000528265 FOXD1Q16676 465 aa23.26■■□□□ 1.31
SPCS2-206ENST00000528265 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.29
SPCS2-206ENST00000528265 PPP6R1Q9UPN7 881 aa22.23■■□□□ 1.15
SPCS2-206ENST00000528265 ADRA2BP18089 450 aa22.17■■□□□ 1.14
SPCS2-206ENST00000528265 PIAS4Q8N2W9 510 aaPredicted RBP21.86■■□□□ 1.09
SPCS2-206ENST00000528265 MSH5O43196 834 aa21.52■■□□□ 1.04
SPCS2-206ENST00000528265 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
SPCS2-206ENST00000528265 ABCC9O60706 1549 aa20.94■□□□□ 0.94
SPCS2-206ENST00000528265 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
SPCS2-206ENST00000528265 PPP4R3CPQ6ZMV5 832 aa20.35■□□□□ 0.85
SPCS2-206ENST00000528265 SCAF1Q9H7N4 1312 aaKnown RBP20.25■□□□□ 0.83
SPCS2-206ENST00000528265 MAPK8IP2Q13387 824 aaPredicted RBP20.15■□□□□ 0.82
SPCS2-206ENST00000528265 DMRT2Q9Y5R5 561 aa19.99■□□□□ 0.79
SPCS2-206ENST00000528265 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
SPCS2-206ENST00000528265 POTEDQ86YR6 584 aa19.91■□□□□ 0.78
SPCS2-206ENST00000528265 CNKSR2Q8WXI2 1034 aa19.84■□□□□ 0.77
SPCS2-206ENST00000528265 NCBP3Q53F19 620 aaKnown RBP19.74■□□□□ 0.75
SPCS2-206ENST00000528265 KCNA4P22459 653 aa19.7■□□□□ 0.74
SPCS2-206ENST00000528265 CCDC180Q9P1Z9 1646 aa19.68■□□□□ 0.74
SPCS2-206ENST00000528265 HOXD11P31277 338 aaPredicted RBP19.52■□□□□ 0.72
SPCS2-206ENST00000528265 RNF216Q9NWF9 866 aaPredicted RBP19.52■□□□□ 0.72
SPCS2-206ENST00000528265 NPM3O75607 178 aaKnown RBP19.5■□□□□ 0.71
SPCS2-206ENST00000528265 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
SPCS2-206ENST00000528265 PABPN1Q86U42 306 aaKnown RBP eCLIP19.31■□□□□ 0.68
SPCS2-206ENST00000528265 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
SPCS2-206ENST00000528265 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
SPCS2-206ENST00000528265 UNC13AQ9UPW8 1703 aa18.97■□□□□ 0.63
SPCS2-206ENST00000528265 NACADO15069 1562 aa18.89■□□□□ 0.62
SPCS2-206ENST00000528265 BICRAQ9NZM4 1560 aa18.85■□□□□ 0.61
SPCS2-206ENST00000528265 CC2D2AQ9P2K1 1620 aa18.84■□□□□ 0.61
SPCS2-206ENST00000528265 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
SPCS2-206ENST00000528265 DCAF8L2P0C7V8 631 aa18.6■□□□□ 0.57
SPCS2-206ENST00000528265 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
SPCS2-206ENST00000528265 CUX2O14529 1486 aa18.51■□□□□ 0.55
SPCS2-206ENST00000528265 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
SPCS2-206ENST00000528265 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
SPCS2-206ENST00000528265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.55
SPCS2-206ENST00000528265 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
SPCS2-206ENST00000528265 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
SPCS2-206ENST00000528265 U3KPZ7 1027 aaPredicted RBP18.27■□□□□ 0.52
SPCS2-206ENST00000528265 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
SPCS2-206ENST00000528265 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
SPCS2-206ENST00000528265 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
SPCS2-206ENST00000528265 ZBTB22O15209 634 aa18.17■□□□□ 0.5
SPCS2-206ENST00000528265 ERCC6Q03468 1493 aa18.14■□□□□ 0.5
SPCS2-206ENST00000528265 MYCNP04198 464 aaPredicted RBP18.03■□□□□ 0.48
SPCS2-206ENST00000528265 CACNB1Q02641 598 aaPredicted RBP17.99■□□□□ 0.47
SPCS2-206ENST00000528265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
SPCS2-206ENST00000528265 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
SPCS2-206ENST00000528265 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
SPCS2-206ENST00000528265 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
SPCS2-206ENST00000528265 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
SPCS2-206ENST00000528265 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
SPCS2-206ENST00000528265 SPINK5Q9NQ38 1064 aaPredicted RBP17.77■□□□□ 0.44
SPCS2-206ENST00000528265 APLP2Q06481 763 aa17.76■□□□□ 0.43
SPCS2-206ENST00000528265 THOC2Q8NI27 1593 aaKnown RBP17.69■□□□□ 0.42
SPCS2-206ENST00000528265 CAPN15O75808 1086 aa17.64■□□□□ 0.41
SPCS2-206ENST00000528265 NESP48681 1621 aa17.64■□□□□ 0.41
SPCS2-206ENST00000528265 ATXN8OSP0DMR3 200 aa17.59■□□□□ 0.41
SPCS2-206ENST00000528265 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.4
SPCS2-206ENST00000528265 ATF5Q9Y2D1 282 aaPredicted RBP17.55■□□□□ 0.4
SPCS2-206ENST00000528265 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
SPCS2-206ENST00000528265 DCAF1Q9Y4B6 1507 aa17.51■□□□□ 0.39
SPCS2-206ENST00000528265 DSG3P32926 999 aa17.48■□□□□ 0.39
SPCS2-206ENST00000528265 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
SPCS2-206ENST00000528265 BAZ1AQ9NRL2 1556 aaPredicted RBP17.48■□□□□ 0.39
SPCS2-206ENST00000528265 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
SPCS2-206ENST00000528265 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
SPCS2-206ENST00000528265 RIMBP3CA6NJZ7 1639 aa17.42■□□□□ 0.38
SPCS2-206ENST00000528265 RIMBP3BA6NNM3 1639 aa17.42■□□□□ 0.38
SPCS2-206ENST00000528265 RIMBP3Q9UFD9 1639 aa17.42■□□□□ 0.38
SPCS2-206ENST00000528265 ZCCHC6Q5VYS8 1495 aaKnown RBP17.4■□□□□ 0.38
SPCS2-206ENST00000528265 KIF21AQ7Z4S6 1674 aa17.38■□□□□ 0.37
SPCS2-206ENST00000528265 ILDR1Q86SU0 546 aaPredicted RBP17.31■□□□□ 0.36
SPCS2-206ENST00000528265 ABCB7O75027 752 aa17.3■□□□□ 0.36
SPCS2-206ENST00000528265 LAMC3Q9Y6N6 1575 aa17.27■□□□□ 0.35
SPCS2-206ENST00000528265 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
SPCS2-206ENST00000528265 POLA2Q14181 598 aa17.21■□□□□ 0.35
SPCS2-206ENST00000528265 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
SPCS2-206ENST00000528265 HMGXB3Q12766 1538 aa17.21■□□□□ 0.34
SPCS2-206ENST00000528265 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.34
SPCS2-206ENST00000528265 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
SPCS2-206ENST00000528265 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
SPCS2-206ENST00000528265 WDR62O43379 1518 aa17.14■□□□□ 0.33
SPCS2-206ENST00000528265 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
SPCS2-206ENST00000528265 ZBTB12Q9Y330 459 aaPredicted RBP16.96■□□□□ 0.31
SPCS2-206ENST00000528265 ARAP1Q96P48 1450 aa16.96■□□□□ 0.31
SPCS2-206ENST00000528265 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
SPCS2-206ENST00000528265 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
SPCS2-206ENST00000528265 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
SPCS2-206ENST00000528265 MKRN4PQ13434 485 aaPredicted RBP16.81■□□□□ 0.28
SPCS2-206ENST00000528265 FBLN2P98095 1184 aa16.77■□□□□ 0.28
SPCS2-206ENST00000528265 PEG3Q9GZU2 1588 aa16.73■□□□□ 0.27
SPCS2-206ENST00000528265 FANCD2Q9BXW9 1451 aa16.7■□□□□ 0.26
SPCS2-206ENST00000528265 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
SPCS2-206ENST00000528265 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms