RNA–Protein interactions for RNA: ENST00000528154.1

CHID1-211, Transcript of chitinase domain containing 1, humanhuman

TSL 4

Gene CHID1, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-211ENST00000528154 NISCHQ9Y2I1 1504 aa32.06■■■□□ 2.72
CHID1-211ENST00000528154 CCDC180Q9P1Z9 1646 aa28.44■■■□□ 2.14
CHID1-211ENST00000528154 ABCC9O60706 1549 aa28.41■■■□□ 2.14
CHID1-211ENST00000528154 DCAF8L2P0C7V8 631 aa27.36■■□□□ 1.97
CHID1-211ENST00000528154 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
CHID1-211ENST00000528154 NACADO15069 1562 aa26.92■■□□□ 1.9
CHID1-211ENST00000528154 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
CHID1-211ENST00000528154 MYO15BQ96JP2 1530 aa26.57■■□□□ 1.84
CHID1-211ENST00000528154 ZCCHC6Q5VYS8 1495 aaKnown RBP26.56■■□□□ 1.84
CHID1-211ENST00000528154 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
CHID1-211ENST00000528154 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.81
CHID1-211ENST00000528154 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
CHID1-211ENST00000528154 BICRAQ9NZM4 1560 aa26.23■■□□□ 1.79
CHID1-211ENST00000528154 SCRIBQ14160 1630 aa26.12■■□□□ 1.77
CHID1-211ENST00000528154 SHROOM4Q9ULL8 1493 aa25.76■■□□□ 1.71
CHID1-211ENST00000528154 EIF4G1Q04637 1599 aaKnown RBP25.58■■□□□ 1.69
CHID1-211ENST00000528154 CC2D2AQ9P2K1 1620 aa25.58■■□□□ 1.69
CHID1-211ENST00000528154 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
CHID1-211ENST00000528154 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
CHID1-211ENST00000528154 ATAD2BQ9ULI0 1458 aa24.9■■□□□ 1.58
CHID1-211ENST00000528154 SMARCA4P51532 1647 aa24.88■■□□□ 1.57
CHID1-211ENST00000528154 BAZ1AQ9NRL2 1556 aaPredicted RBP24.82■■□□□ 1.56
CHID1-211ENST00000528154 SMARCA2P51531 1590 aa24.79■■□□□ 1.56
CHID1-211ENST00000528154 MROH2BQ7Z745 1585 aa24.75■■□□□ 1.55
CHID1-211ENST00000528154 BAZ1BQ9UIG0 1483 aaKnown RBP24.68■■□□□ 1.54
CHID1-211ENST00000528154 HMGXB3Q12766 1538 aa24.63■■□□□ 1.53
CHID1-211ENST00000528154 PEG3Q9GZU2 1588 aa24.57■■□□□ 1.52
CHID1-211ENST00000528154 ERCC6Q03468 1493 aa24.49■■□□□ 1.51
CHID1-211ENST00000528154 NESP48681 1621 aa24.49■■□□□ 1.51
CHID1-211ENST00000528154 WIZO95785 1651 aa24.46■■□□□ 1.51
CHID1-211ENST00000528154 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
CHID1-211ENST00000528154 CADPSQ9ULU8 1353 aa24.25■■□□□ 1.47
CHID1-211ENST00000528154 LAMC3Q9Y6N6 1575 aa24.23■■□□□ 1.47
CHID1-211ENST00000528154 CUX2O14529 1486 aa24.2■■□□□ 1.47
CHID1-211ENST00000528154 PDS5BQ9NTI5 1447 aa24.2■■□□□ 1.46
CHID1-211ENST00000528154 TOP2AP11388 1531 aaKnown RBP24.09■■□□□ 1.45
CHID1-211ENST00000528154 KIF21AQ7Z4S6 1674 aa24.06■■□□□ 1.44
CHID1-211ENST00000528154 DNAJC5Q9H3Z4 198 aa24.03■■□□□ 1.44
CHID1-211ENST00000528154 THOC2Q8NI27 1593 aaKnown RBP23.98■■□□□ 1.43
CHID1-211ENST00000528154 CFTRP13569 1480 aa23.96■■□□□ 1.43
CHID1-211ENST00000528154 CCDC88BA6NC98 1476 aa23.95■■□□□ 1.42
CHID1-211ENST00000528154 FANCD2Q9BXW9 1451 aa23.93■■□□□ 1.42
CHID1-211ENST00000528154 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
CHID1-211ENST00000528154 CEP164Q9UPV0 1460 aa23.89■■□□□ 1.42
CHID1-211ENST00000528154 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
CHID1-211ENST00000528154 WDR62O43379 1518 aa23.76■■□□□ 1.39
CHID1-211ENST00000528154 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
CHID1-211ENST00000528154 PRDM2Q13029 1718 aa23.58■■□□□ 1.37
CHID1-211ENST00000528154 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
CHID1-211ENST00000528154 ABCC8Q09428 1581 aa23.46■■□□□ 1.35
CHID1-211ENST00000528154 OSCARQ8IYS5 282 aa23.42■■□□□ 1.34
CHID1-211ENST00000528154 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
CHID1-211ENST00000528154 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
CHID1-211ENST00000528154 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
CHID1-211ENST00000528154 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.325e-6■■□□□ 14.3
CHID1-211ENST00000528154 SOGA1O94964 1423 aa23.29■■□□□ 1.32
CHID1-211ENST00000528154 RAD54L2Q9Y4B4 1467 aa23.28■■□□□ 1.32
CHID1-211ENST00000528154 POLA1P09884 1462 aaPredicted RBP23.26■■□□□ 1.31
CHID1-211ENST00000528154 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
CHID1-211ENST00000528154 FBLN2P98095 1184 aa23.24■■□□□ 1.31
CHID1-211ENST00000528154 TDRD9Q8NDG6 1382 aaKnown RBP23.24■■□□□ 1.31
CHID1-211ENST00000528154 CUX1P39880 1505 aa23.2■■□□□ 1.3
CHID1-211ENST00000528154 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
CHID1-211ENST00000528154 FGD5Q6ZNL6 1462 aa23.18■■□□□ 1.3
CHID1-211ENST00000528154 EIF4G3O43432 1585 aaKnown RBP23.14■■□□□ 1.3
CHID1-211ENST00000528154 CHMP7Q8WUX9 453 aaPredicted RBP23.06■■□□□ 1.28
CHID1-211ENST00000528154 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
CHID1-211ENST00000528154 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
CHID1-211ENST00000528154 GAPVD1Q14C86 1478 aa22.95■■□□□ 1.26
CHID1-211ENST00000528154 GRIN2BQ13224 1484 aa22.94■■□□□ 1.26
CHID1-211ENST00000528154 CHD1O14646 1710 aa22.93■■□□□ 1.26
CHID1-211ENST00000528154 CYB5RLQ6IPT4 315 aa22.92■■□□□ 1.26
CHID1-211ENST00000528154 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
CHID1-211ENST00000528154 SYNJ1O43426 1573 aa22.89■■□□□ 1.25
CHID1-211ENST00000528154 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
CHID1-211ENST00000528154 TOP2BQ02880 1626 aa22.87■■□□□ 1.25
CHID1-211ENST00000528154 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
CHID1-211ENST00000528154 RIMBP3CA6NJZ7 1639 aa22.85■■□□□ 1.25
CHID1-211ENST00000528154 RIMBP3BA6NNM3 1639 aa22.85■■□□□ 1.25
CHID1-211ENST00000528154 RIMBP3Q9UFD9 1639 aa22.85■■□□□ 1.25
CHID1-211ENST00000528154 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
CHID1-211ENST00000528154 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
CHID1-211ENST00000528154 SYNJ2O15056 1496 aa22.81■■□□□ 1.24
CHID1-211ENST00000528154 PBRM1Q86U86 1689 aa22.77■■□□□ 1.24
CHID1-211ENST00000528154 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
CHID1-211ENST00000528154 FHAD1B1AJZ9 1412 aa22.65■■□□□ 1.22
CHID1-211ENST00000528154 CLASP1Q7Z460 1538 aa22.64■■□□□ 1.21
CHID1-211ENST00000528154 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
CHID1-211ENST00000528154 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
CHID1-211ENST00000528154 ERICH3Q5RHP9 1530 aa22.6■■□□□ 1.21
CHID1-211ENST00000528154 TRHP20396 242 aaPredicted RBP22.58■■□□□ 1.21
CHID1-211ENST00000528154 IGF1RP08069 1367 aa22.57■■□□□ 1.2
CHID1-211ENST00000528154 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
CHID1-211ENST00000528154 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
CHID1-211ENST00000528154 JPH4Q96JJ6 628 aa22.52■■□□□ 1.2
CHID1-211ENST00000528154 NUP160Q12769 1436 aa22.51■■□□□ 1.19
CHID1-211ENST00000528154 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
CHID1-211ENST00000528154 ERCC6L2Q5T890 1561 aa22.43■■□□□ 1.18
CHID1-211ENST00000528154 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
CHID1-211ENST00000528154 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms