RNA–Protein interactions for RNA: ENST00000527999.1

RBL1-204, Transcript of RB transcriptional corepressor like 1, humanhuman

TSL 5

Gene RBL1, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBL1-204ENST00000527999 NISCHQ9Y2I1 1504 aa50.52■■■■■ 5.68
RBL1-204ENST00000527999 CCDC180Q9P1Z9 1646 aa44.69■■■■■ 4.74
RBL1-204ENST00000527999 ABCC9O60706 1549 aa43.36■■■■■ 4.53
RBL1-204ENST00000527999 ZCCHC6Q5VYS8 1495 aaKnown RBP42.17■■■■■ 4.34
RBL1-204ENST00000527999 DCAF8L2P0C7V8 631 aa42.03■■■■■ 4.32
RBL1-204ENST00000527999 NACADO15069 1562 aa41.99■■■■■ 4.31
RBL1-204ENST00000527999 MYO15BQ96JP2 1530 aa41.93■■■■■ 4.3
RBL1-204ENST00000527999 RB1CC1Q8TDY2 1594 aa41.92■■■■■ 4.3
RBL1-204ENST00000527999 DCAF1Q9Y4B6 1507 aa41.87■■■■■ 4.29
RBL1-204ENST00000527999 UNC13AQ9UPW8 1703 aa40.79■■■■■ 4.12
RBL1-204ENST00000527999 SCRIBQ14160 1630 aa40.76■■■■■ 4.12
RBL1-204ENST00000527999 PABPN1Q86U42 306 aaKnown RBP eCLIP40.6■■■■■ 4.09
RBL1-204ENST00000527999 BICRAQ9NZM4 1560 aa40.59■■■■■ 4.09
RBL1-204ENST00000527999 SHROOM4Q9ULL8 1493 aa40.33■■■■■ 4.05
RBL1-204ENST00000527999 EIF4G1Q04637 1599 aaKnown RBP39.51■■■■□ 3.92
RBL1-204ENST00000527999 DNAJC5BQ9UF47 199 aa39.46■■■■□ 3.91
RBL1-204ENST00000527999 CECR2Q9BXF3 1484 aa39.28■■■■□ 3.88
RBL1-204ENST00000527999 CC2D2AQ9P2K1 1620 aa39.22■■■■□ 3.87
RBL1-204ENST00000527999 BAZ1AQ9NRL2 1556 aaPredicted RBP39.13■■■■□ 3.85
RBL1-204ENST00000527999 SMARCA4P51532 1647 aa39.07■■■■□ 3.84
RBL1-204ENST00000527999 MROH2BQ7Z745 1585 aa38.91■■■■□ 3.82
RBL1-204ENST00000527999 ATAD2BQ9ULI0 1458 aa38.82■■■■□ 3.81
RBL1-204ENST00000527999 SMARCA2P51531 1590 aa38.79■■■■□ 3.8
RBL1-204ENST00000527999 NCAPD3P42695 1498 aa38.78■■■■□ 3.8
RBL1-204ENST00000527999 PEG3Q9GZU2 1588 aa38.74■■■■□ 3.79
RBL1-204ENST00000527999 RSF1Q96T23 1441 aaPredicted RBP38.65■■■■□ 3.78
RBL1-204ENST00000527999 HMGXB3Q12766 1538 aa38.58■■■■□ 3.77
RBL1-204ENST00000527999 BAZ1BQ9UIG0 1483 aaKnown RBP38.51■■■■□ 3.76
RBL1-204ENST00000527999 WIZO95785 1651 aa38.44■■■■□ 3.74
RBL1-204ENST00000527999 TOP2AP11388 1531 aaKnown RBP38.14■■■■□ 3.7
RBL1-204ENST00000527999 SUPT5HO00267 1087 aaKnown RBP37.92■■■■□ 3.66
RBL1-204ENST00000527999 CCDC88BA6NC98 1476 aa37.7■■■■□ 3.63
RBL1-204ENST00000527999 CADPSQ9ULU8 1353 aa37.67■■■■□ 3.62
RBL1-204ENST00000527999 LAMC3Q9Y6N6 1575 aa37.64■■■■□ 3.62
RBL1-204ENST00000527999 NESP48681 1621 aa37.62■■■■□ 3.61
RBL1-204ENST00000527999 CFTRP13569 1480 aa37.51■■■■□ 3.59
RBL1-204ENST00000527999 PDS5BQ9NTI5 1447 aa37.43■■■■□ 3.58
RBL1-204ENST00000527999 ERCC6Q03468 1493 aa37.37■■■■□ 3.57
RBL1-204ENST00000527999 FANCD2Q9BXW9 1451 aa37.19■■■■□ 3.54
RBL1-204ENST00000527999 CEP164Q9UPV0 1460 aa37.11■■■■□ 3.53
RBL1-204ENST00000527999 KIF21AQ7Z4S6 1674 aa37.11■■■■□ 3.53
RBL1-204ENST00000527999 PRDM2Q13029 1718 aa37.08■■■■□ 3.53
RBL1-204ENST00000527999 MRC2Q9UBG0 1479 aa36.98■■■■□ 3.51
RBL1-204ENST00000527999 THOC2Q8NI27 1593 aaKnown RBP36.96■■■■□ 3.51
RBL1-204ENST00000527999 CUX2O14529 1486 aa36.88■■■■□ 3.5
RBL1-204ENST00000527999 WDR62O43379 1518 aa36.83■■■■□ 3.49
RBL1-204ENST00000527999 URB2Q14146 1524 aaKnown RBP36.77■■■■□ 3.48
RBL1-204ENST00000527999 ABCC8Q09428 1581 aa36.72■■■■□ 3.47
RBL1-204ENST00000527999 TOPBP1Q92547 1522 aa36.63■■■■□ 3.45
RBL1-204ENST00000527999 DNMBPQ6XZF7 1577 aa36.61■■■■□ 3.45
RBL1-204ENST00000527999 CUX1P39880 1505 aa36.48■■■■□ 3.43
RBL1-204ENST00000527999 WRNQ14191 1432 aaPredicted RBP eCLIP36.44■■■■□ 3.42
RBL1-204ENST00000527999 IFT140Q96RY7 1462 aa36.35■■■■□ 3.41
RBL1-204ENST00000527999 POLA1P09884 1462 aaPredicted RBP36.34■■■■□ 3.41
RBL1-204ENST00000527999 FGD5Q6ZNL6 1462 aa36.31■■■■□ 3.4
RBL1-204ENST00000527999 TOP2BQ02880 1626 aa36.26■■■■□ 3.4
RBL1-204ENST00000527999 SYNJ1O43426 1573 aa36.24■■■■□ 3.39
RBL1-204ENST00000527999 SOGA1O94964 1423 aa36.24■■■■□ 3.39
RBL1-204ENST00000527999 BIVM-ERCC5R4GMW8 1640 aa36.23■■■■□ 3.39
RBL1-204ENST00000527999 TARBP1Q13395 1621 aaKnown RBP36.16■■■■□ 3.38
RBL1-204ENST00000527999 RAD54L2Q9Y4B4 1467 aa36.16■■■■□ 3.38
RBL1-204ENST00000527999 ZNF608Q9ULD9 1512 aaPredicted RBP36.08■■■■□ 3.37
RBL1-204ENST00000527999 ABCA10Q8WWZ4 1543 aa36.01■■■■□ 3.36
RBL1-204ENST00000527999 WDR97A6NE52 1622 aa35.97■■■■□ 3.35
RBL1-204ENST00000527999 TDRD9Q8NDG6 1382 aaKnown RBP35.96■■■■□ 3.35
RBL1-204ENST00000527999 AQRO60306 1485 aaKnown RBP eCLIP35.94■■■■□ 3.345e-10■■■■■ 40.2
RBL1-204ENST00000527999 EIF4G3O43432 1585 aaKnown RBP35.93■■■■□ 3.34
RBL1-204ENST00000527999 TRIM41Q8WV44 630 aa35.85■■■■□ 3.33
RBL1-204ENST00000527999 GAPVD1Q14C86 1478 aa35.8■■■■□ 3.32
RBL1-204ENST00000527999 GRIN2BQ13224 1484 aa35.77■■■■□ 3.32
RBL1-204ENST00000527999 ABCA5Q8WWZ7 1642 aa35.76■■■■□ 3.32
RBL1-204ENST00000527999 KIF27Q86VH2 1401 aa35.66■■■■□ 3.3
RBL1-204ENST00000527999 CHIC1Q5VXU3 224 aa35.66■■■■□ 3.3
RBL1-204ENST00000527999 MAGI1Q96QZ7 1491 aaPredicted RBP35.63■■■■□ 3.29
RBL1-204ENST00000527999 SNAPC4Q5SXM2 1469 aa35.62■■■■□ 3.29
RBL1-204ENST00000527999 ERICH3Q5RHP9 1530 aa35.58■■■■□ 3.29
RBL1-204ENST00000527999 PBRM1Q86U86 1689 aa35.58■■■■□ 3.29
RBL1-204ENST00000527999 SYNJ2O15056 1496 aa35.48■■■■□ 3.27
RBL1-204ENST00000527999 IGF1RP08069 1367 aa35.48■■■■□ 3.27
RBL1-204ENST00000527999 CHMP7Q8WUX9 453 aaPredicted RBP35.46■■■■□ 3.27
RBL1-204ENST00000527999 FBLN2P98095 1184 aa35.45■■■■□ 3.27
RBL1-204ENST00000527999 OSCARQ8IYS5 282 aa35.45■■■■□ 3.27
RBL1-204ENST00000527999 FHAD1B1AJZ9 1412 aa35.44■■■■□ 3.26
RBL1-204ENST00000527999 ADAMTS12P58397 1594 aa35.41■■■■□ 3.26
RBL1-204ENST00000527999 RUSC2Q8N2Y8 1516 aa35.37■■■■□ 3.25
RBL1-204ENST00000527999 CHD1O14646 1710 aa35.33■■■■□ 3.25
RBL1-204ENST00000527999 DNAJC5Q9H3Z4 198 aa35.31■■■■□ 3.24
RBL1-204ENST00000527999 GRIN2AQ12879 1464 aa35.29■■■■□ 3.24
RBL1-204ENST00000527999 CUL7Q14999 1698 aa35.28■■■■□ 3.24
RBL1-204ENST00000527999 EEA1Q15075 1411 aa35.27■■■■□ 3.24
RBL1-204ENST00000527999 CARMIL1Q5VZK9 1371 aa35.26■■■■□ 3.24
RBL1-204ENST00000527999 CSRNP3Q8WYN3 585 aa35.15■■■■□ 3.22
RBL1-204ENST00000527999 NUP160Q12769 1436 aa35.14■■■■□ 3.22
RBL1-204ENST00000527999 RAPGEF2Q9Y4G8 1499 aa35.09■■■■□ 3.21
RBL1-204ENST00000527999 CLASP1Q7Z460 1538 aa35.07■■■■□ 3.21
RBL1-204ENST00000527999 PRXQ9BXM0 1461 aa35.07■■■■□ 3.2
RBL1-204ENST00000527999 CEP170Q5SW79 1584 aa35.04■■■■□ 3.2
RBL1-204ENST00000527999 FAM9AQ8IZU1 332 aaPredicted RBP35.03■■■■□ 3.2
RBL1-204ENST00000527999 KIAA0586Q9BVV6 1533 aa34.91■■■■□ 3.18
RBL1-204ENST00000527999 JPH4Q96JJ6 628 aa34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms