RNA–Protein interactions for RNA: ENST00000525513.1

GRINA-203, Transcript of glutamate ionotropic receptor NMDA type subunit associated protein 1, humanhuman

TSL 5

Gene GRINA, Length 796 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRINA-203ENST00000525513 NISCHQ9Y2I1 1504 aa39.13■■■■□ 3.85
GRINA-203ENST00000525513 CCDC180Q9P1Z9 1646 aa34.99■■■■□ 3.19
GRINA-203ENST00000525513 ABCC9O60706 1549 aa34.88■■■■□ 3.17
GRINA-203ENST00000525513 RB1CC1Q8TDY2 1594 aa33.2■■■□□ 2.91
GRINA-203ENST00000525513 NACADO15069 1562 aa33.02■■■□□ 2.88
GRINA-203ENST00000525513 DCAF8L2P0C7V8 631 aa32.88■■■□□ 2.85
GRINA-203ENST00000525513 DNAJC5BQ9UF47 199 aa32.68■■■□□ 2.82
GRINA-203ENST00000525513 MYO15BQ96JP2 1530 aa32.62■■■□□ 2.81
GRINA-203ENST00000525513 UNC13AQ9UPW8 1703 aa32.6■■■□□ 2.81
GRINA-203ENST00000525513 PABPN1Q86U42 306 aaKnown RBP eCLIP32.52■■■□□ 2.8
GRINA-203ENST00000525513 ZCCHC6Q5VYS8 1495 aaKnown RBP32.48■■■□□ 2.79
GRINA-203ENST00000525513 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
GRINA-203ENST00000525513 DCAF1Q9Y4B6 1507 aa32.29■■■□□ 2.76
GRINA-203ENST00000525513 SCRIBQ14160 1630 aa31.95■■■□□ 2.71
GRINA-203ENST00000525513 SHROOM4Q9ULL8 1493 aa31.76■■■□□ 2.67
GRINA-203ENST00000525513 CC2D2AQ9P2K1 1620 aa31.52■■■□□ 2.64
GRINA-203ENST00000525513 EIF4G1Q04637 1599 aaKnown RBP31.48■■■□□ 2.63
GRINA-203ENST00000525513 CECR2Q9BXF3 1484 aa31.36■■■□□ 2.61
GRINA-203ENST00000525513 NCAPD3P42695 1498 aa30.51■■■□□ 2.48
GRINA-203ENST00000525513 SMARCA4P51532 1647 aa30.49■■■□□ 2.47
GRINA-203ENST00000525513 ATAD2BQ9ULI0 1458 aa30.47■■■□□ 2.47
GRINA-203ENST00000525513 SMARCA2P51531 1590 aa30.32■■■□□ 2.45
GRINA-203ENST00000525513 BAZ1AQ9NRL2 1556 aaPredicted RBP30.31■■■□□ 2.44
GRINA-203ENST00000525513 HMGXB3Q12766 1538 aa30.29■■■□□ 2.44
GRINA-203ENST00000525513 MROH2BQ7Z745 1585 aa30.2■■■□□ 2.43
GRINA-203ENST00000525513 PEG3Q9GZU2 1588 aa30.18■■■□□ 2.42
GRINA-203ENST00000525513 BAZ1BQ9UIG0 1483 aaKnown RBP30.13■■■□□ 2.41
GRINA-203ENST00000525513 NESP48681 1621 aa30.07■■■□□ 2.4
GRINA-203ENST00000525513 ERCC6Q03468 1493 aa29.99■■■□□ 2.39
GRINA-203ENST00000525513 CUX2O14529 1486 aa29.91■■■□□ 2.38
GRINA-203ENST00000525513 WIZO95785 1651 aa29.85■■■□□ 2.37
GRINA-203ENST00000525513 LAMC3Q9Y6N6 1575 aa29.77■■■□□ 2.36
GRINA-203ENST00000525513 DNAJC5Q9H3Z4 198 aa29.75■■■□□ 2.35
GRINA-203ENST00000525513 THOC2Q8NI27 1593 aaKnown RBP29.69■■■□□ 2.34
GRINA-203ENST00000525513 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
GRINA-203ENST00000525513 RSF1Q96T23 1441 aaPredicted RBP29.62■■■□□ 2.33
GRINA-203ENST00000525513 CADPSQ9ULU8 1353 aa29.58■■■□□ 2.33
GRINA-203ENST00000525513 PDS5BQ9NTI5 1447 aa29.55■■■□□ 2.32
GRINA-203ENST00000525513 TOP2AP11388 1531 aaKnown RBP29.42■■■□□ 2.3
GRINA-203ENST00000525513 MRC2Q9UBG0 1479 aa29.34■■■□□ 2.29
GRINA-203ENST00000525513 CFTRP13569 1480 aa29.3■■■□□ 2.28
GRINA-203ENST00000525513 WDR62O43379 1518 aa29.29■■■□□ 2.28
GRINA-203ENST00000525513 FANCD2Q9BXW9 1451 aa29.26■■■□□ 2.27
GRINA-203ENST00000525513 CEP164Q9UPV0 1460 aa29.24■■■□□ 2.27
GRINA-203ENST00000525513 CCDC88BA6NC98 1476 aa29.12■■■□□ 2.25
GRINA-203ENST00000525513 URB2Q14146 1524 aaKnown RBP29.07■■■□□ 2.24
GRINA-203ENST00000525513 PRDM2Q13029 1718 aa29.03■■■□□ 2.24
GRINA-203ENST00000525513 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
GRINA-203ENST00000525513 ZNF608Q9ULD9 1512 aaPredicted RBP28.69■■■□□ 2.18
GRINA-203ENST00000525513 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
GRINA-203ENST00000525513 DNMBPQ6XZF7 1577 aa28.63■■■□□ 2.17
GRINA-203ENST00000525513 ABCC8Q09428 1581 aa28.58■■■□□ 2.17
GRINA-203ENST00000525513 OSCARQ8IYS5 282 aa28.57■■■□□ 2.16
GRINA-203ENST00000525513 TARBP1Q13395 1621 aaKnown RBP28.51■■■□□ 2.15
GRINA-203ENST00000525513 EIF4G3O43432 1585 aaKnown RBP28.5■■■□□ 2.15
GRINA-203ENST00000525513 TRIM41Q8WV44 630 aa28.49■■■□□ 2.15
GRINA-203ENST00000525513 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
GRINA-203ENST00000525513 AQRO60306 1485 aaKnown RBP eCLIP28.42■■■□□ 2.14
GRINA-203ENST00000525513 RAD54L2Q9Y4B4 1467 aa28.4■■■□□ 2.14
GRINA-203ENST00000525513 SUPT5HO00267 1087 aaKnown RBP28.39■■■□□ 2.14
GRINA-203ENST00000525513 CUX1P39880 1505 aa28.35■■■□□ 2.13
GRINA-203ENST00000525513 FGD5Q6ZNL6 1462 aa28.32■■■□□ 2.12
GRINA-203ENST00000525513 SOGA1O94964 1423 aa28.3■■■□□ 2.12
GRINA-203ENST00000525513 CHD1O14646 1710 aa28.28■■■□□ 2.12
GRINA-203ENST00000525513 RIMBP3CA6NJZ7 1639 aa28.27■■■□□ 2.12
GRINA-203ENST00000525513 RIMBP3BA6NNM3 1639 aa28.27■■■□□ 2.12
GRINA-203ENST00000525513 RIMBP3Q9UFD9 1639 aa28.27■■■□□ 2.12
GRINA-203ENST00000525513 TDRD9Q8NDG6 1382 aaKnown RBP28.26■■■□□ 2.12
GRINA-203ENST00000525513 ARHGEF11O15085 1522 aa28.17■■■□□ 2.1
GRINA-203ENST00000525513 WDR97A6NE52 1622 aa28.14■■■□□ 2.09
GRINA-203ENST00000525513 SNAPC4Q5SXM2 1469 aa28.12■■■□□ 2.09
GRINA-203ENST00000525513 FBLN2P98095 1184 aa28.11■■■□□ 2.09
GRINA-203ENST00000525513 GRIN2BQ13224 1484 aa28.02■■■□□ 2.08
GRINA-203ENST00000525513 MAGI1Q96QZ7 1491 aaPredicted RBP28■■■□□ 2.07
GRINA-203ENST00000525513 ABCA10Q8WWZ4 1543 aa27.98■■■□□ 2.07
GRINA-203ENST00000525513 PBRM1Q86U86 1689 aa27.98■■■□□ 2.07
GRINA-203ENST00000525513 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
GRINA-203ENST00000525513 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
GRINA-203ENST00000525513 CLASP1Q7Z460 1538 aa27.95■■■□□ 2.06
GRINA-203ENST00000525513 ARAP1Q96P48 1450 aa27.94■■■□□ 2.06
GRINA-203ENST00000525513 CHMP7Q8WUX9 453 aaPredicted RBP27.93■■■□□ 2.06
GRINA-203ENST00000525513 SYNJ1O43426 1573 aa27.93■■■□□ 2.06
GRINA-203ENST00000525513 CYB5RLQ6IPT4 315 aa27.92■■■□□ 2.06
GRINA-203ENST00000525513 BIVM-ERCC5R4GMW8 1640 aa27.92■■■□□ 2.06
GRINA-203ENST00000525513 SYNJ2O15056 1496 aa27.91■■■□□ 2.06
GRINA-203ENST00000525513 TOP2BQ02880 1626 aa27.9■■■□□ 2.06
GRINA-203ENST00000525513 WRNQ14191 1432 aaPredicted RBP eCLIP27.87■■■□□ 2.05
GRINA-203ENST00000525513 ADAMTS12P58397 1594 aa27.72■■■□□ 2.03
GRINA-203ENST00000525513 GRIN2AQ12879 1464 aa27.69■■■□□ 2.02
GRINA-203ENST00000525513 CEP170Q5SW79 1584 aa27.64■■■□□ 2.01
GRINA-203ENST00000525513 ERICH3Q5RHP9 1530 aa27.62■■■□□ 2.01
GRINA-203ENST00000525513 NUP160Q12769 1436 aa27.61■■■□□ 2.01
GRINA-203ENST00000525513 FHAD1B1AJZ9 1412 aa27.6■■■□□ 2.01
GRINA-203ENST00000525513 ERCC6L2Q5T890 1561 aa27.6■■■□□ 2.01
GRINA-203ENST00000525513 TRHP20396 242 aaPredicted RBP27.5■■□□□ 1.99
GRINA-203ENST00000525513 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
GRINA-203ENST00000525513 IGF1RP08069 1367 aa27.35■■□□□ 1.97
GRINA-203ENST00000525513 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
GRINA-203ENST00000525513 PRG4Q92954 1404 aaPredicted RBP27.31■■□□□ 1.96
GRINA-203ENST00000525513 JPH4Q96JJ6 628 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms