RNA–Protein interactions for RNA: ENST00000525513.1

GRINA-203, Transcript of glutamate ionotropic receptor NMDA type subunit associated protein 1, humanhuman

TSL 5

Gene GRINA, Length 796 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRINA-203ENST00000525513 PCBP1Q15365 356 aaKnown RBP eCLIP17.39■□□□□ 0.374e-35■■■■■ 94.8
GRINA-203ENST00000525513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.99■□□□□ 0.317e-6■■■■■ 74.5
GRINA-203ENST00000525513 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.9■□□□□ 0.142e-17■■■■■ 69.4
GRINA-203ENST00000525513 HNRNPKP61978 463 aaKnown RBP eCLIP15.78■□□□□ 0.126e-22■■■■■ 43.2
GRINA-203ENST00000525513 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.76□□□□□ -0.057e-12■■■■■ 39.4
GRINA-203ENST00000525513 PCBP2Q15366 365 aaKnown RBP eCLIP15.4■□□□□ 0.061e-24■■■■■ 39.2
GRINA-203ENST00000525513 SF3A3Q12874 501 aaKnown RBP eCLIP15.14■□□□□ 0.011e-11■■■■■ 29.2
GRINA-203ENST00000525513 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.3■□□□□ 0.521e-7■■■■■ 27.5
GRINA-203ENST00000525513 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.87■□□□□ 0.615e-11■■■■□ 24
GRINA-203ENST00000525513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.43■■□□□ 1.52e-33■■■■□ 23.4
GRINA-203ENST00000525513 SF3B4Q15427 424 aaKnown RBP eCLIP14.15□□□□□ -0.141e-10■■■■□ 21.6
GRINA-203ENST00000525513 EFTUD2Q15029 972 aaKnown RBP eCLIP15.77■□□□□ 0.124e-24■■■■□ 21.2
GRINA-203ENST00000525513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.4□□□□□ -0.261e-10■■■□□ 15.8
GRINA-203ENST00000525513 ZRANB2O95218 330 aaKnown RBP eCLIP16.45■□□□□ 0.227e-6■■■□□ 15
GRINA-203ENST00000525513 YBX3P16989 372 aaKnown RBP eCLIP21.28■■□□□ 16e-11■■□□□ 12.5
GRINA-203ENST00000525513 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.86■□□□□ 0.298e-7■■□□□ 12.4
GRINA-203ENST00000525513 IGF2BP3O00425 579 aaKnown RBP eCLIP19.51■□□□□ 0.711e-7■■□□□ 12.3
GRINA-203ENST00000525513 SMNDC1O75940 238 aaKnown RBP eCLIP14.03□□□□□ -0.163e-7■■□□□ 12.1
GRINA-203ENST00000525513 SND1Q7KZF4 910 aaKnown RBP eCLIP16.5■□□□□ 0.233e-17■■□□□ 12
GRINA-203ENST00000525513 PUM1Q14671 1186 aaKnown RBP eCLIP16.61■□□□□ 0.254e-7■■□□□ 11.8
GRINA-203ENST00000525513 LARP4Q71RC2 724 aaKnown RBP eCLIP15.15■□□□□ 0.028e-8■■□□□ 11.7
Retrieved 21 of 21 RNA–protein pairs in 6.6 ms