RNA–Protein interactions for RNA: ENST00000525225.1

CHID1-208, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-208ENST00000525225 NISCHQ9Y2I1 1504 aa28.12■■■□□ 2.09
CHID1-208ENST00000525225 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
CHID1-208ENST00000525225 ABCC9O60706 1549 aa24.89■■□□□ 1.57
CHID1-208ENST00000525225 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
CHID1-208ENST00000525225 RB1CC1Q8TDY2 1594 aa23.78■■□□□ 1.4
CHID1-208ENST00000525225 NACADO15069 1562 aa23.69■■□□□ 1.38
CHID1-208ENST00000525225 MYO15BQ96JP2 1530 aa23.45■■□□□ 1.34
CHID1-208ENST00000525225 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
CHID1-208ENST00000525225 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.32
CHID1-208ENST00000525225 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
CHID1-208ENST00000525225 DNAJC5BQ9UF47 199 aa23.18■■□□□ 1.3
CHID1-208ENST00000525225 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
CHID1-208ENST00000525225 BICRAQ9NZM4 1560 aa23.02■■□□□ 1.28
CHID1-208ENST00000525225 SCRIBQ14160 1630 aa22.85■■□□□ 1.25
CHID1-208ENST00000525225 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
CHID1-208ENST00000525225 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
CHID1-208ENST00000525225 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
CHID1-208ENST00000525225 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
CHID1-208ENST00000525225 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
CHID1-208ENST00000525225 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
CHID1-208ENST00000525225 SMARCA4P51532 1647 aa21.83■■□□□ 1.08
CHID1-208ENST00000525225 BAZ1AQ9NRL2 1556 aaPredicted RBP21.81■■□□□ 1.08
CHID1-208ENST00000525225 SMARCA2P51531 1590 aa21.79■■□□□ 1.08
CHID1-208ENST00000525225 HMGXB3Q12766 1538 aa21.7■■□□□ 1.06
CHID1-208ENST00000525225 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
CHID1-208ENST00000525225 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
CHID1-208ENST00000525225 PEG3Q9GZU2 1588 aa21.62■■□□□ 1.05
CHID1-208ENST00000525225 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
CHID1-208ENST00000525225 NESP48681 1621 aa21.43■■□□□ 1.02
CHID1-208ENST00000525225 WIZO95785 1651 aa21.37■■□□□ 1.01
CHID1-208ENST00000525225 CUX2O14529 1486 aa21.35■■□□□ 1.01
CHID1-208ENST00000525225 RSF1Q96T23 1441 aaPredicted RBP21.34■■□□□ 1.01
CHID1-208ENST00000525225 LAMC3Q9Y6N6 1575 aa21.32■■□□□ 1
CHID1-208ENST00000525225 CADPSQ9ULU8 1353 aa21.28■■□□□ 1
CHID1-208ENST00000525225 PDS5BQ9NTI5 1447 aa21.28■■□□□ 1
CHID1-208ENST00000525225 DNAJC5Q9H3Z4 198 aa21.15■□□□□ 0.98
CHID1-208ENST00000525225 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
CHID1-208ENST00000525225 THOC2Q8NI27 1593 aaKnown RBP21.09■□□□□ 0.97
CHID1-208ENST00000525225 KIF21AQ7Z4S6 1674 aa21.08■□□□□ 0.96
CHID1-208ENST00000525225 CFTRP13569 1480 aa21.04■□□□□ 0.96
CHID1-208ENST00000525225 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
CHID1-208ENST00000525225 FANCD2Q9BXW9 1451 aa20.99■□□□□ 0.95
CHID1-208ENST00000525225 CEP164Q9UPV0 1460 aa20.98■□□□□ 0.95
CHID1-208ENST00000525225 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
CHID1-208ENST00000525225 WDR62O43379 1518 aa20.9■□□□□ 0.94
CHID1-208ENST00000525225 URB2Q14146 1524 aaKnown RBP20.77■□□□□ 0.92
CHID1-208ENST00000525225 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
CHID1-208ENST00000525225 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
CHID1-208ENST00000525225 ABCC8Q09428 1581 aa20.64■□□□□ 0.9
CHID1-208ENST00000525225 TOPBP1Q92547 1522 aa20.6■□□□□ 0.89
CHID1-208ENST00000525225 IFT140Q96RY7 1462 aa20.57■□□□□ 0.88
CHID1-208ENST00000525225 OSCARQ8IYS5 282 aa20.54■□□□□ 0.88
CHID1-208ENST00000525225 DNMBPQ6XZF7 1577 aa20.52■□□□□ 0.88
CHID1-208ENST00000525225 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
CHID1-208ENST00000525225 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
CHID1-208ENST00000525225 SOGA1O94964 1423 aa20.39■□□□□ 0.85
CHID1-208ENST00000525225 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.852e-6■■■■■ 33.1
CHID1-208ENST00000525225 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
CHID1-208ENST00000525225 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
CHID1-208ENST00000525225 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
CHID1-208ENST00000525225 EIF4G3O43432 1585 aaKnown RBP20.32■□□□□ 0.84
CHID1-208ENST00000525225 TDRD9Q8NDG6 1382 aaKnown RBP20.32■□□□□ 0.84
CHID1-208ENST00000525225 CUX1P39880 1505 aa20.32■□□□□ 0.84
CHID1-208ENST00000525225 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
CHID1-208ENST00000525225 FBLN2P98095 1184 aa20.28■□□□□ 0.84
CHID1-208ENST00000525225 WDR97A6NE52 1622 aa20.18■□□□□ 0.82
CHID1-208ENST00000525225 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
CHID1-208ENST00000525225 GRIN2BQ13224 1484 aa20.15■□□□□ 0.82
CHID1-208ENST00000525225 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
CHID1-208ENST00000525225 SNAPC4Q5SXM2 1469 aa20.13■□□□□ 0.81
CHID1-208ENST00000525225 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
CHID1-208ENST00000525225 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
CHID1-208ENST00000525225 MAGI1Q96QZ7 1491 aaPredicted RBP20.11■□□□□ 0.81
CHID1-208ENST00000525225 CHD1O14646 1710 aa20.1■□□□□ 0.81
CHID1-208ENST00000525225 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
CHID1-208ENST00000525225 RIMBP3CA6NJZ7 1639 aa20.06■□□□□ 0.8
CHID1-208ENST00000525225 RIMBP3BA6NNM3 1639 aa20.06■□□□□ 0.8
CHID1-208ENST00000525225 RIMBP3Q9UFD9 1639 aa20.06■□□□□ 0.8
CHID1-208ENST00000525225 TOP2BQ02880 1626 aa20.05■□□□□ 0.8
CHID1-208ENST00000525225 SYNJ2O15056 1496 aa20.04■□□□□ 0.8
CHID1-208ENST00000525225 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
CHID1-208ENST00000525225 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.79
CHID1-208ENST00000525225 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
CHID1-208ENST00000525225 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
CHID1-208ENST00000525225 PBRM1Q86U86 1689 aa19.96■□□□□ 0.79
CHID1-208ENST00000525225 CLASP1Q7Z460 1538 aa19.92■□□□□ 0.78
CHID1-208ENST00000525225 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
CHID1-208ENST00000525225 FHAD1B1AJZ9 1412 aa19.88■□□□□ 0.77
CHID1-208ENST00000525225 GRIN2AQ12879 1464 aa19.86■□□□□ 0.77
CHID1-208ENST00000525225 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
CHID1-208ENST00000525225 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
CHID1-208ENST00000525225 NUP160Q12769 1436 aa19.79■□□□□ 0.76
CHID1-208ENST00000525225 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
CHID1-208ENST00000525225 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
CHID1-208ENST00000525225 IGF1RP08069 1367 aa19.74■□□□□ 0.75
CHID1-208ENST00000525225 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
CHID1-208ENST00000525225 JPH4Q96JJ6 628 aa19.71■□□□□ 0.75
CHID1-208ENST00000525225 ERCC6L2Q5T890 1561 aa19.62■□□□□ 0.73
CHID1-208ENST00000525225 PRG4Q92954 1404 aaPredicted RBP19.62■□□□□ 0.73
CHID1-208ENST00000525225 CARMIL1Q5VZK9 1371 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms