RNA–Protein interactions for RNA: ENST00000524901.1

PITPNM1-203, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 4

Gene PITPNM1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-203ENST00000524901 NISCHQ9Y2I1 1504 aa48.91■■■■■ 5.42
PITPNM1-203ENST00000524901 CCDC180Q9P1Z9 1646 aa43.57■■■■■ 4.57
PITPNM1-203ENST00000524901 ABCC9O60706 1549 aa43.09■■■■■ 4.49
PITPNM1-203ENST00000524901 RB1CC1Q8TDY2 1594 aa41.21■■■■■ 4.19
PITPNM1-203ENST00000524901 DCAF8L2P0C7V8 631 aa41.16■■■■■ 4.18
PITPNM1-203ENST00000524901 NACADO15069 1562 aa41.07■■■■■ 4.16
PITPNM1-203ENST00000524901 ZCCHC6Q5VYS8 1495 aaKnown RBP40.66■■■■■ 4.1
PITPNM1-203ENST00000524901 MYO15BQ96JP2 1530 aa40.66■■■■■ 4.1
PITPNM1-203ENST00000524901 DCAF1Q9Y4B6 1507 aa40.38■■■■■ 4.06
PITPNM1-203ENST00000524901 UNC13AQ9UPW8 1703 aa40.28■■■■■ 4.04
PITPNM1-203ENST00000524901 PABPN1Q86U42 306 aaKnown RBP eCLIP40.25■■■■■ 4.03
PITPNM1-203ENST00000524901 BICRAQ9NZM4 1560 aa39.99■■■■□ 3.99
PITPNM1-203ENST00000524901 DNAJC5BQ9UF47 199 aa39.87■■■■□ 3.97
PITPNM1-203ENST00000524901 SCRIBQ14160 1630 aa39.83■■■■□ 3.97
PITPNM1-203ENST00000524901 SHROOM4Q9ULL8 1493 aa39.44■■■■□ 3.9
PITPNM1-203ENST00000524901 EIF4G1Q04637 1599 aaKnown RBP38.98■■■■□ 3.83
PITPNM1-203ENST00000524901 CC2D2AQ9P2K1 1620 aa38.91■■■■□ 3.82
PITPNM1-203ENST00000524901 CECR2Q9BXF3 1484 aa38.72■■■■□ 3.79
PITPNM1-203ENST00000524901 SMARCA4P51532 1647 aa38.02■■■■□ 3.68
PITPNM1-203ENST00000524901 BAZ1AQ9NRL2 1556 aaPredicted RBP37.92■■■■□ 3.66
PITPNM1-203ENST00000524901 NCAPD3P42695 1498 aa37.91■■■■□ 3.66
PITPNM1-203ENST00000524901 ATAD2BQ9ULI0 1458 aa37.91■■■■□ 3.66
PITPNM1-203ENST00000524901 SMARCA2P51531 1590 aa37.81■■■■□ 3.64
PITPNM1-203ENST00000524901 MROH2BQ7Z745 1585 aa37.72■■■■□ 3.63
PITPNM1-203ENST00000524901 HMGXB3Q12766 1538 aa37.67■■■■□ 3.62
PITPNM1-203ENST00000524901 PEG3Q9GZU2 1588 aa37.6■■■■□ 3.61
PITPNM1-203ENST00000524901 BAZ1BQ9UIG0 1483 aaKnown RBP37.59■■■■□ 3.61
PITPNM1-203ENST00000524901 WIZO95785 1651 aa37.31■■■■□ 3.56
PITPNM1-203ENST00000524901 NESP48681 1621 aa37.18■■■■□ 3.54
PITPNM1-203ENST00000524901 RSF1Q96T23 1441 aaPredicted RBP37.18■■■■□ 3.54
PITPNM1-203ENST00000524901 ERCC6Q03468 1493 aa37.14■■■■□ 3.54
PITPNM1-203ENST00000524901 LAMC3Q9Y6N6 1575 aa36.96■■■■□ 3.51
PITPNM1-203ENST00000524901 TOP2AP11388 1531 aaKnown RBP36.85■■■■□ 3.49
PITPNM1-203ENST00000524901 CADPSQ9ULU8 1353 aa36.82■■■■□ 3.49
PITPNM1-203ENST00000524901 CUX2O14529 1486 aa36.8■■■■□ 3.48
PITPNM1-203ENST00000524901 PDS5BQ9NTI5 1447 aa36.75■■■■□ 3.47
PITPNM1-203ENST00000524901 KIF21AQ7Z4S6 1674 aa36.69■■■■□ 3.46
PITPNM1-203ENST00000524901 THOC2Q8NI27 1593 aaKnown RBP36.62■■■■□ 3.45
PITPNM1-203ENST00000524901 CFTRP13569 1480 aa36.51■■■■□ 3.44
PITPNM1-203ENST00000524901 CCDC88BA6NC98 1476 aa36.45■■■■□ 3.43
PITPNM1-203ENST00000524901 FANCD2Q9BXW9 1451 aa36.42■■■■□ 3.42
PITPNM1-203ENST00000524901 MRC2Q9UBG0 1479 aa36.4■■■■□ 3.42
PITPNM1-203ENST00000524901 CEP164Q9UPV0 1460 aa36.39■■■■□ 3.42
PITPNM1-203ENST00000524901 WDR62O43379 1518 aa36.27■■■■□ 3.4
PITPNM1-203ENST00000524901 PRDM2Q13029 1718 aa36.16■■■■□ 3.38
PITPNM1-203ENST00000524901 DNAJC5Q9H3Z4 198 aa36.11■■■■□ 3.37
PITPNM1-203ENST00000524901 SUPT5HO00267 1087 aaKnown RBP36.09■■■■□ 3.37
PITPNM1-203ENST00000524901 URB2Q14146 1524 aaKnown RBP36.07■■■■□ 3.36
PITPNM1-203ENST00000524901 TOPBP1Q92547 1522 aa35.78■■■■□ 3.32
PITPNM1-203ENST00000524901 ABCC8Q09428 1581 aa35.72■■■■□ 3.31
PITPNM1-203ENST00000524901 DNMBPQ6XZF7 1577 aa35.69■■■■□ 3.3
PITPNM1-203ENST00000524901 IFT140Q96RY7 1462 aa35.62■■■■□ 3.29
PITPNM1-203ENST00000524901 ZNF608Q9ULD9 1512 aaPredicted RBP35.54■■■■□ 3.28
PITPNM1-203ENST00000524901 POLA1P09884 1462 aaPredicted RBP35.46■■■■□ 3.27
PITPNM1-203ENST00000524901 TARBP1Q13395 1621 aaKnown RBP35.4■■■■□ 3.26
PITPNM1-203ENST00000524901 CUX1P39880 1505 aa35.4■■■■□ 3.26
PITPNM1-203ENST00000524901 RAD54L2Q9Y4B4 1467 aa35.35■■■■□ 3.25
PITPNM1-203ENST00000524901 EIF4G3O43432 1585 aaKnown RBP35.35■■■■□ 3.25
PITPNM1-203ENST00000524901 FGD5Q6ZNL6 1462 aa35.35■■■■□ 3.25
PITPNM1-203ENST00000524901 SOGA1O94964 1423 aa35.32■■■■□ 3.25
PITPNM1-203ENST00000524901 AQRO60306 1485 aaKnown RBP eCLIP35.31■■■■□ 3.241e-9■■□□□ 11.8
PITPNM1-203ENST00000524901 OSCARQ8IYS5 282 aa35.28■■■■□ 3.24
PITPNM1-203ENST00000524901 TDRD9Q8NDG6 1382 aaKnown RBP35.21■■■■□ 3.23
PITPNM1-203ENST00000524901 WRNQ14191 1432 aaPredicted RBP eCLIP35.06■■■■□ 3.2
PITPNM1-203ENST00000524901 WDR97A6NE52 1622 aa35.03■■■■□ 3.2
PITPNM1-203ENST00000524901 FBLN2P98095 1184 aa35.01■■■■□ 3.2
PITPNM1-203ENST00000524901 SYNJ1O43426 1573 aa34.99■■■■□ 3.19
PITPNM1-203ENST00000524901 TOP2BQ02880 1626 aa34.98■■■■□ 3.19
PITPNM1-203ENST00000524901 BIVM-ERCC5R4GMW8 1640 aa34.97■■■■□ 3.19
PITPNM1-203ENST00000524901 CHD1O14646 1710 aa34.97■■■■□ 3.19
PITPNM1-203ENST00000524901 SNAPC4Q5SXM2 1469 aa34.96■■■■□ 3.19
PITPNM1-203ENST00000524901 ABCA10Q8WWZ4 1543 aa34.94■■■■□ 3.18
PITPNM1-203ENST00000524901 GRIN2BQ13224 1484 aa34.93■■■■□ 3.18
PITPNM1-203ENST00000524901 GAPVD1Q14C86 1478 aa34.9■■■■□ 3.18
PITPNM1-203ENST00000524901 TRIM41Q8WV44 630 aa34.89■■■■□ 3.18
PITPNM1-203ENST00000524901 MAGI1Q96QZ7 1491 aaPredicted RBP34.84■■■■□ 3.17
PITPNM1-203ENST00000524901 ABCA5Q8WWZ7 1642 aa34.83■■■■□ 3.17
PITPNM1-203ENST00000524901 PBRM1Q86U86 1689 aa34.82■■■■□ 3.17
PITPNM1-203ENST00000524901 CHMP7Q8WUX9 453 aaPredicted RBP34.81■■■■□ 3.16
PITPNM1-203ENST00000524901 SYNJ2O15056 1496 aa34.73■■■■□ 3.15
PITPNM1-203ENST00000524901 RIMBP3CA6NJZ7 1639 aa34.73■■■■□ 3.15
PITPNM1-203ENST00000524901 RIMBP3BA6NNM3 1639 aa34.73■■■■□ 3.15
PITPNM1-203ENST00000524901 RIMBP3Q9UFD9 1639 aa34.73■■■■□ 3.15
PITPNM1-203ENST00000524901 ARHGEF11O15085 1522 aa34.69■■■■□ 3.14
PITPNM1-203ENST00000524901 CLASP1Q7Z460 1538 aa34.56■■■■□ 3.12
PITPNM1-203ENST00000524901 ADAMTS12P58397 1594 aa34.53■■■■□ 3.12
PITPNM1-203ENST00000524901 ERICH3Q5RHP9 1530 aa34.51■■■■□ 3.12
PITPNM1-203ENST00000524901 GRIN2AQ12879 1464 aa34.49■■■■□ 3.11
PITPNM1-203ENST00000524901 FHAD1B1AJZ9 1412 aa34.47■■■■□ 3.11
PITPNM1-203ENST00000524901 CYB5RLQ6IPT4 315 aa34.46■■■■□ 3.11
PITPNM1-203ENST00000524901 ARAP1Q96P48 1450 aa34.39■■■■□ 3.1
PITPNM1-203ENST00000524901 KIF27Q86VH2 1401 aa34.35■■■■□ 3.09
PITPNM1-203ENST00000524901 CEP170Q5SW79 1584 aa34.33■■■■□ 3.09
PITPNM1-203ENST00000524901 NUP160Q12769 1436 aa34.33■■■■□ 3.09
PITPNM1-203ENST00000524901 IGF1RP08069 1367 aa34.25■■■■□ 3.07
PITPNM1-203ENST00000524901 CUL7Q14999 1698 aa34.12■■■■□ 3.05
PITPNM1-203ENST00000524901 ERCC6L2Q5T890 1561 aa34.12■■■■□ 3.05
PITPNM1-203ENST00000524901 SHROOM2Q13796 1616 aa34.08■■■■□ 3.05
PITPNM1-203ENST00000524901 CARMIL1Q5VZK9 1371 aa34.06■■■■□ 3.04
PITPNM1-203ENST00000524901 JPH4Q96JJ6 628 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 428.9 ms