RNA–Protein interactions for RNA: ENST00000524846.5

GSDMD-202, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 3,462 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-202ENST00000524846 NISCHQ9Y2I1 1504 aa28.9■■■□□ 2.22
GSDMD-202ENST00000524846 SHROOM4Q9ULL8 1493 aa26.19■■□□□ 1.78
GSDMD-202ENST00000524846 SUPT5HO00267 1087 aaKnown RBP26.08■■□□□ 1.77
GSDMD-202ENST00000524846 HRCP23327 699 aa25.46■■□□□ 1.67
GSDMD-202ENST00000524846 PCGF6Q9BYE7 350 aa25.45■■□□□ 1.66
GSDMD-202ENST00000524846 DCAF8L2P0C7V8 631 aa25.31■■□□□ 1.64
GSDMD-202ENST00000524846 PPARGC1BQ86YN6 1023 aaKnown RBP25.26■■□□□ 1.63
GSDMD-202ENST00000524846 CHIC1Q5VXU3 224 aa25.15■■□□□ 1.62
GSDMD-202ENST00000524846 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
GSDMD-202ENST00000524846 LOC105371045A0A1W2PR82 267 aa24.82■■□□□ 1.56
GSDMD-202ENST00000524846 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
GSDMD-202ENST00000524846 TRIM26Q12899 539 aaPredicted RBP24.43■■□□□ 1.5
GSDMD-202ENST00000524846 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
GSDMD-202ENST00000524846 FAM9AQ8IZU1 332 aaPredicted RBP24.25■■□□□ 1.47
GSDMD-202ENST00000524846 DCAF1Q9Y4B6 1507 aa24.22■■□□□ 1.47
GSDMD-202ENST00000524846 ZEB1P37275 1124 aaPredicted RBP24.07■■□□□ 1.44
GSDMD-202ENST00000524846 PELP1Q8IZL8 1130 aaKnown RBP24.03■■□□□ 1.44
GSDMD-202ENST00000524846 SCAF1Q9H7N4 1312 aaKnown RBP23.99■■□□□ 1.43
GSDMD-202ENST00000524846 TRIM41Q8WV44 630 aa23.99■■□□□ 1.43
GSDMD-202ENST00000524846 CCDC180Q9P1Z9 1646 aa23.75■■□□□ 1.39
GSDMD-202ENST00000524846 TTBK1Q5TCY1 1321 aaPredicted RBP23.69■■□□□ 1.38
GSDMD-202ENST00000524846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.68■■□□□ 1.38
GSDMD-202ENST00000524846 CCER1Q8TC90 406 aaPredicted RBP23.67■■□□□ 1.38
GSDMD-202ENST00000524846 NEUROD1Q13562 356 aa23.53■■□□□ 1.36
GSDMD-202ENST00000524846 ACIN1Q9UKV3 1341 aaKnown RBP23.5■■□□□ 1.35
GSDMD-202ENST00000524846 GTF3C3Q9Y5Q9 886 aa23.46■■□□□ 1.35
GSDMD-202ENST00000524846 DIEXFQ68CQ4 756 aaKnown RBP23.4■■□□□ 1.34
GSDMD-202ENST00000524846 CENPBP07199 599 aaPredicted RBP23.39■■□□□ 1.33
GSDMD-202ENST00000524846 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.33
GSDMD-202ENST00000524846 YTHDC1Q96MU7 727 aaKnown RBP23.32■■□□□ 1.32
GSDMD-202ENST00000524846 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
GSDMD-202ENST00000524846 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
GSDMD-202ENST00000524846 ABCC9O60706 1549 aa23.1■■□□□ 1.29
GSDMD-202ENST00000524846 MYT1Q01538 1121 aa22.95■■□□□ 1.26
GSDMD-202ENST00000524846 UBTFP17480 764 aaKnown RBP22.94■■□□□ 1.26
GSDMD-202ENST00000524846 ZNF316A6NFI3 1004 aaPredicted RBP22.92■■□□□ 1.26
GSDMD-202ENST00000524846 HNRNPUL2Q1KMD3 747 aaKnown RBP22.89■■□□□ 1.25
GSDMD-202ENST00000524846 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
GSDMD-202ENST00000524846 MIER1Q8N108 512 aa22.81■■□□□ 1.24
GSDMD-202ENST00000524846 RANGAP1P46060 587 aaPredicted RBP22.78■■□□□ 1.24
GSDMD-202ENST00000524846 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
GSDMD-202ENST00000524846 CEP162Q5TB80 1403 aa22.63■■□□□ 1.21
GSDMD-202ENST00000524846 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
GSDMD-202ENST00000524846 APLP2Q06481 763 aa22.56■■□□□ 1.2
GSDMD-202ENST00000524846 WIZO95785 1651 aa22.53■■□□□ 1.2
GSDMD-202ENST00000524846 SOGA1O94964 1423 aa22.52■■□□□ 1.2
GSDMD-202ENST00000524846 CCDC88BA6NC98 1476 aa22.51■■□□□ 1.19
GSDMD-202ENST00000524846 ABCC8Q09428 1581 aa22.48■■□□□ 1.19
GSDMD-202ENST00000524846 TNIKQ9UKE5 1360 aa22.41■■□□□ 1.18
GSDMD-202ENST00000524846 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
GSDMD-202ENST00000524846 RUSC2Q8N2Y8 1516 aa22.35■■□□□ 1.17
GSDMD-202ENST00000524846 SUPT16HQ9Y5B9 1047 aaKnown RBP22.25■■□□□ 1.15
GSDMD-202ENST00000524846 BCANQ96GW7 911 aa22.24■■□□□ 1.15
GSDMD-202ENST00000524846 ITGAEP38570 1179 aa22.22■■□□□ 1.15
GSDMD-202ENST00000524846 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.145e-7■■■■■ 27.2
GSDMD-202ENST00000524846 GOLGA3Q08378 1498 aa22.16■■□□□ 1.14
GSDMD-202ENST00000524846 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
GSDMD-202ENST00000524846 CLIP1P30622 1438 aa22.14■■□□□ 1.13
GSDMD-202ENST00000524846 NACADO15069 1562 aa22.11■■□□□ 1.13
GSDMD-202ENST00000524846 EEA1Q15075 1411 aa22.07■■□□□ 1.12
GSDMD-202ENST00000524846 TSHZ2Q9NRE2 1034 aa22.06■■□□□ 1.12
GSDMD-202ENST00000524846 KCNH8Q96L42 1107 aa22.03■■□□□ 1.12
GSDMD-202ENST00000524846 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
GSDMD-202ENST00000524846 TOP2AP11388 1531 aaKnown RBP21.98■■□□□ 1.11
GSDMD-202ENST00000524846 ANP32EQ9BTT0 268 aa21.96■■□□□ 1.11
GSDMD-202ENST00000524846 FKBP8Q14318 412 aa21.96■■□□□ 1.11
GSDMD-202ENST00000524846 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
GSDMD-202ENST00000524846 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
GSDMD-202ENST00000524846 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
GSDMD-202ENST00000524846 CLSPNQ9HAW4 1339 aa21.93■■□□□ 1.1
GSDMD-202ENST00000524846 KANK4Q5T7N3 995 aaPredicted RBP21.91■■□□□ 1.1
GSDMD-202ENST00000524846 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.09
GSDMD-202ENST00000524846 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
GSDMD-202ENST00000524846 NEFLP07196 543 aa21.85■■□□□ 1.09
GSDMD-202ENST00000524846 HIRIP3Q9BW71 556 aaPredicted RBP21.84■■□□□ 1.09
GSDMD-202ENST00000524846 RAPGEF2Q9Y4G8 1499 aa21.83■■□□□ 1.09
GSDMD-202ENST00000524846 TRIM52Q96A61 297 aa21.79■■□□□ 1.08
GSDMD-202ENST00000524846 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
GSDMD-202ENST00000524846 ATP1B4Q9UN42 357 aaPredicted RBP21.76■■□□□ 1.07
GSDMD-202ENST00000524846 BCL11AQ9H165 835 aa21.75■■□□□ 1.07
GSDMD-202ENST00000524846 SIN3AQ96ST3 1273 aa21.7■■□□□ 1.06
GSDMD-202ENST00000524846 FAM50AQ14320 339 aaKnown RBP21.68■■□□□ 1.06
GSDMD-202ENST00000524846 KIF21BO75037 1637 aa21.66■■□□□ 1.06
GSDMD-202ENST00000524846 RBM19Q9Y4C8 960 aaKnown RBP21.64■■□□□ 1.06
GSDMD-202ENST00000524846 SYNJ1O43426 1573 aa21.64■■□□□ 1.05
GSDMD-202ENST00000524846 IRX6P78412 446 aaPredicted RBP21.58■■□□□ 1.05
GSDMD-202ENST00000524846 ANP32CO43423 234 aa21.58■■□□□ 1.04
GSDMD-202ENST00000524846 CCNB3Q8WWL7 1395 aa21.57■■□□□ 1.04
GSDMD-202ENST00000524846 ERICH6Q7L0X2 663 aa21.57■■□□□ 1.04
GSDMD-202ENST00000524846 BAZ1BQ9UIG0 1483 aaKnown RBP21.54■■□□□ 1.04
GSDMD-202ENST00000524846 RAB3GAP2Q9H2M9 1393 aa21.53■■□□□ 1.04
GSDMD-202ENST00000524846 P3H3Q8IVL6 736 aa21.53■■□□□ 1.04
GSDMD-202ENST00000524846 ARAP1Q96P48 1450 aa21.44■■□□□ 1.02
GSDMD-202ENST00000524846 HNRNPUQ00839 825 aaKnown RBP eCLIP21.41■■□□□ 1.02
GSDMD-202ENST00000524846 CDK11AQ9UQ88 783 aaPredicted RBP21.38■■□□□ 1.01
GSDMD-202ENST00000524846 RRBP1Q9P2E9 1410 aaKnown RBP21.38■■□□□ 1.01
GSDMD-202ENST00000524846 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
GSDMD-202ENST00000524846 SETD5Q9C0A6 1442 aa21.33■■□□□ 1
GSDMD-202ENST00000524846 MSH5O43196 834 aa21.32■■□□□ 1
GSDMD-202ENST00000524846 CNGB1Q14028 1251 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms