RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
CTSB-207ENST00000524654 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
CTSB-207ENST00000524654 ABCC9O60706 1549 aa23.77■■□□□ 1.4
CTSB-207ENST00000524654 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
CTSB-207ENST00000524654 NACADO15069 1562 aa22.72■■□□□ 1.23
CTSB-207ENST00000524654 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
CTSB-207ENST00000524654 MYO15BQ96JP2 1530 aa22.56■■□□□ 1.2
CTSB-207ENST00000524654 ZCCHC6Q5VYS8 1495 aaKnown RBP22.49■■□□□ 1.19
CTSB-207ENST00000524654 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
CTSB-207ENST00000524654 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
CTSB-207ENST00000524654 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
CTSB-207ENST00000524654 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
CTSB-207ENST00000524654 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
CTSB-207ENST00000524654 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
CTSB-207ENST00000524654 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
CTSB-207ENST00000524654 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
CTSB-207ENST00000524654 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
CTSB-207ENST00000524654 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.02
CTSB-207ENST00000524654 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
CTSB-207ENST00000524654 SMARCA4P51532 1647 aa21■□□□□ 0.95
CTSB-207ENST00000524654 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
CTSB-207ENST00000524654 BAZ1AQ9NRL2 1556 aaPredicted RBP20.96■□□□□ 0.95
CTSB-207ENST00000524654 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
CTSB-207ENST00000524654 HMGXB3Q12766 1538 aa20.85■□□□□ 0.93
CTSB-207ENST00000524654 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
CTSB-207ENST00000524654 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.92
CTSB-207ENST00000524654 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
CTSB-207ENST00000524654 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
CTSB-207ENST00000524654 WIZO95785 1651 aa20.56■□□□□ 0.88
CTSB-207ENST00000524654 NESP48681 1621 aa20.53■□□□□ 0.88
CTSB-207ENST00000524654 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
CTSB-207ENST00000524654 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
CTSB-207ENST00000524654 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
CTSB-207ENST00000524654 CUX2O14529 1486 aa20.37■□□□□ 0.85
CTSB-207ENST00000524654 TOP2AP11388 1531 aaKnown RBP20.36■□□□□ 0.85
CTSB-207ENST00000524654 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
CTSB-207ENST00000524654 THOC2Q8NI27 1593 aaKnown RBP20.23■□□□□ 0.83
CTSB-207ENST00000524654 CFTRP13569 1480 aa20.22■□□□□ 0.83
CTSB-207ENST00000524654 KIF21AQ7Z4S6 1674 aa20.19■□□□□ 0.82
CTSB-207ENST00000524654 CCDC88BA6NC98 1476 aa20.15■□□□□ 0.82
CTSB-207ENST00000524654 FANCD2Q9BXW9 1451 aa20.12■□□□□ 0.81
CTSB-207ENST00000524654 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
CTSB-207ENST00000524654 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
CTSB-207ENST00000524654 WDR62O43379 1518 aa20.07■□□□□ 0.8
CTSB-207ENST00000524654 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
CTSB-207ENST00000524654 URB2Q14146 1524 aaKnown RBP19.94■□□□□ 0.78
CTSB-207ENST00000524654 PRDM2Q13029 1718 aa19.89■□□□□ 0.77
CTSB-207ENST00000524654 SUPT5HO00267 1087 aaKnown RBP19.85■□□□□ 0.77
CTSB-207ENST00000524654 TOPBP1Q92547 1522 aa19.77■□□□□ 0.76
CTSB-207ENST00000524654 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
CTSB-207ENST00000524654 DNMBPQ6XZF7 1577 aa19.71■□□□□ 0.75
CTSB-207ENST00000524654 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
CTSB-207ENST00000524654 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
CTSB-207ENST00000524654 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
CTSB-207ENST00000524654 TARBP1Q13395 1621 aaKnown RBP19.56■□□□□ 0.72
CTSB-207ENST00000524654 CUX1P39880 1505 aa19.56■□□□□ 0.72
CTSB-207ENST00000524654 SOGA1O94964 1423 aa19.52■□□□□ 0.72
CTSB-207ENST00000524654 FGD5Q6ZNL6 1462 aa19.52■□□□□ 0.72
CTSB-207ENST00000524654 RAD54L2Q9Y4B4 1467 aa19.52■□□□□ 0.72
CTSB-207ENST00000524654 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
CTSB-207ENST00000524654 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
CTSB-207ENST00000524654 AQRO60306 1485 aaKnown RBP eCLIP19.5■□□□□ 0.718e-7■□□□□ 11.1
CTSB-207ENST00000524654 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
CTSB-207ENST00000524654 WDR97A6NE52 1622 aa19.38■□□□□ 0.69
CTSB-207ENST00000524654 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
CTSB-207ENST00000524654 ABCA10Q8WWZ4 1543 aa19.33■□□□□ 0.68
CTSB-207ENST00000524654 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
CTSB-207ENST00000524654 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
CTSB-207ENST00000524654 SYNJ1O43426 1573 aa19.31■□□□□ 0.68
CTSB-207ENST00000524654 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
CTSB-207ENST00000524654 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
CTSB-207ENST00000524654 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
CTSB-207ENST00000524654 FBLN2P98095 1184 aa19.28■□□□□ 0.68
CTSB-207ENST00000524654 MAGI1Q96QZ7 1491 aaPredicted RBP19.27■□□□□ 0.67
CTSB-207ENST00000524654 ABCA5Q8WWZ7 1642 aa19.24■□□□□ 0.67
CTSB-207ENST00000524654 CHD1O14646 1710 aa19.23■□□□□ 0.67
CTSB-207ENST00000524654 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
CTSB-207ENST00000524654 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
CTSB-207ENST00000524654 SYNJ2O15056 1496 aa19.21■□□□□ 0.67
CTSB-207ENST00000524654 ARHGEF11O15085 1522 aa19.17■□□□□ 0.66
CTSB-207ENST00000524654 PBRM1Q86U86 1689 aa19.16■□□□□ 0.66
CTSB-207ENST00000524654 RIMBP3CA6NJZ7 1639 aa19.15■□□□□ 0.66
CTSB-207ENST00000524654 RIMBP3BA6NNM3 1639 aa19.15■□□□□ 0.66
CTSB-207ENST00000524654 RIMBP3Q9UFD9 1639 aa19.15■□□□□ 0.66
CTSB-207ENST00000524654 CLASP1Q7Z460 1538 aa19.11■□□□□ 0.65
CTSB-207ENST00000524654 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
CTSB-207ENST00000524654 ADAMTS12P58397 1594 aa19.06■□□□□ 0.64
CTSB-207ENST00000524654 GRIN2AQ12879 1464 aa19.06■□□□□ 0.64
CTSB-207ENST00000524654 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
CTSB-207ENST00000524654 CYB5RLQ6IPT4 315 aa19.01■□□□□ 0.63
CTSB-207ENST00000524654 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
CTSB-207ENST00000524654 NUP160Q12769 1436 aa19■□□□□ 0.63
CTSB-207ENST00000524654 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
CTSB-207ENST00000524654 IGF1RP08069 1367 aa18.96■□□□□ 0.63
CTSB-207ENST00000524654 CEP170Q5SW79 1584 aa18.96■□□□□ 0.63
CTSB-207ENST00000524654 SHROOM2Q13796 1616 aa18.84■□□□□ 0.61
CTSB-207ENST00000524654 ERCC6L2Q5T890 1561 aa18.83■□□□□ 0.6
CTSB-207ENST00000524654 CUL7Q14999 1698 aa18.82■□□□□ 0.6
CTSB-207ENST00000524654 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
CTSB-207ENST00000524654 JPH4Q96JJ6 628 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms