RNA–Protein interactions for RNA: ENST00000524296.5

SFI1-228, Transcript of SFI1 centrin binding protein, humanhuman

TSL 5

Gene SFI1, Length 2,108 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-228ENST00000524296 NISCHQ9Y2I1 1504 aa33.17■■■□□ 2.9
SFI1-228ENST00000524296 CCDC180Q9P1Z9 1646 aa28.62■■■□□ 2.17
SFI1-228ENST00000524296 ZCCHC6Q5VYS8 1495 aaKnown RBP28■■■□□ 2.07
SFI1-228ENST00000524296 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.02
SFI1-228ENST00000524296 DCAF1Q9Y4B6 1507 aa27.32■■□□□ 1.96
SFI1-228ENST00000524296 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
SFI1-228ENST00000524296 SUPT5HO00267 1087 aaKnown RBP26.93■■□□□ 1.9
SFI1-228ENST00000524296 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
SFI1-228ENST00000524296 ABCC9O60706 1549 aa26.7■■□□□ 1.87
SFI1-228ENST00000524296 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
SFI1-228ENST00000524296 NACADO15069 1562 aa26.48■■□□□ 1.83
SFI1-228ENST00000524296 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
SFI1-228ENST00000524296 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
SFI1-228ENST00000524296 RSF1Q96T23 1441 aaPredicted RBP25.98■■□□□ 1.75
SFI1-228ENST00000524296 UNC13AQ9UPW8 1703 aa25.89■■□□□ 1.73
SFI1-228ENST00000524296 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
SFI1-228ENST00000524296 HRCP23327 699 aa25.82■■□□□ 1.72
SFI1-228ENST00000524296 MROH2BQ7Z745 1585 aa25.74■■□□□ 1.71
SFI1-228ENST00000524296 WIZO95785 1651 aa25.61■■□□□ 1.69
SFI1-228ENST00000524296 PCGF6Q9BYE7 350 aa25.61■■□□□ 1.69
SFI1-228ENST00000524296 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
SFI1-228ENST00000524296 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
SFI1-228ENST00000524296 LOC105371045A0A1W2PR82 267 aa25.47■■□□□ 1.67
SFI1-228ENST00000524296 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
SFI1-228ENST00000524296 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.641e-6■■■■□ 22
SFI1-228ENST00000524296 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
SFI1-228ENST00000524296 TRIM26Q12899 539 aaPredicted RBP25.21■■□□□ 1.63
SFI1-228ENST00000524296 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
SFI1-228ENST00000524296 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
SFI1-228ENST00000524296 PPARGC1BQ86YN6 1023 aaKnown RBP25.11■■□□□ 1.61
SFI1-228ENST00000524296 SMARCA2P51531 1590 aa25.07■■□□□ 1.6
SFI1-228ENST00000524296 PEG3Q9GZU2 1588 aa25.02■■□□□ 1.6
SFI1-228ENST00000524296 CCDC88BA6NC98 1476 aa25.01■■□□□ 1.59
SFI1-228ENST00000524296 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
SFI1-228ENST00000524296 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.57
SFI1-228ENST00000524296 ZEB1P37275 1124 aaPredicted RBP24.8■■□□□ 1.56
SFI1-228ENST00000524296 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
SFI1-228ENST00000524296 BAZ1BQ9UIG0 1483 aaKnown RBP24.71■■□□□ 1.55
SFI1-228ENST00000524296 EHMT2Q96KQ7 1210 aa24.53■■□□□ 1.52
SFI1-228ENST00000524296 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
SFI1-228ENST00000524296 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
SFI1-228ENST00000524296 WRNQ14191 1432 aaPredicted RBP eCLIP24.41■■□□□ 1.5
SFI1-228ENST00000524296 SYNJ1O43426 1573 aa24.4■■□□□ 1.5
SFI1-228ENST00000524296 SOGA1O94964 1423 aa24.39■■□□□ 1.49
SFI1-228ENST00000524296 PELP1Q8IZL8 1130 aaKnown RBP24.36■■□□□ 1.49
SFI1-228ENST00000524296 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
SFI1-228ENST00000524296 EEA1Q15075 1411 aa24.23■■□□□ 1.47
SFI1-228ENST00000524296 CEP162Q5TB80 1403 aa24.17■■□□□ 1.46
SFI1-228ENST00000524296 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
SFI1-228ENST00000524296 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
SFI1-228ENST00000524296 CC2D2AQ9P2K1 1620 aa24.16■■□□□ 1.46
SFI1-228ENST00000524296 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
SFI1-228ENST00000524296 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
SFI1-228ENST00000524296 CFTRP13569 1480 aa24.11■■□□□ 1.45
SFI1-228ENST00000524296 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
SFI1-228ENST00000524296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
SFI1-228ENST00000524296 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
SFI1-228ENST00000524296 GOLGA3Q08378 1498 aa24.03■■□□□ 1.44
SFI1-228ENST00000524296 KIF21BO75037 1637 aa24.02■■□□□ 1.44
SFI1-228ENST00000524296 CUX1P39880 1505 aa24.02■■□□□ 1.44
SFI1-228ENST00000524296 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
SFI1-228ENST00000524296 UBTFP17480 764 aaKnown RBP23.92■■□□□ 1.42
SFI1-228ENST00000524296 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
SFI1-228ENST00000524296 RAPGEF2Q9Y4G8 1499 aa23.85■■□□□ 1.41
SFI1-228ENST00000524296 TTBK1Q5TCY1 1321 aaPredicted RBP23.82■■□□□ 1.4
SFI1-228ENST00000524296 SCAF1Q9H7N4 1312 aaKnown RBP23.82■■□□□ 1.4
SFI1-228ENST00000524296 MYT1Q01538 1121 aa23.76■■□□□ 1.39
SFI1-228ENST00000524296 PRXQ9BXM0 1461 aa23.72■■□□□ 1.39
SFI1-228ENST00000524296 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
SFI1-228ENST00000524296 CLIP1P30622 1438 aa23.7■■□□□ 1.38
SFI1-228ENST00000524296 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
SFI1-228ENST00000524296 DIEXFQ68CQ4 756 aaKnown RBP23.68■■□□□ 1.38
SFI1-228ENST00000524296 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
SFI1-228ENST00000524296 NESP48681 1621 aa23.67■■□□□ 1.38
SFI1-228ENST00000524296 VPS8Q8N3P4 1428 aa23.65■■□□□ 1.38
SFI1-228ENST00000524296 FGD5Q6ZNL6 1462 aa23.64■■□□□ 1.37
SFI1-228ENST00000524296 ACIN1Q9UKV3 1341 aaKnown RBP23.61■■□□□ 1.37
SFI1-228ENST00000524296 CUX2O14529 1486 aa23.58■■□□□ 1.36
SFI1-228ENST00000524296 DNMBPQ6XZF7 1577 aa23.55■■□□□ 1.36
SFI1-228ENST00000524296 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
SFI1-228ENST00000524296 DNAJC5BQ9UF47 199 aa23.53■■□□□ 1.36
SFI1-228ENST00000524296 ZNF316A6NFI3 1004 aaPredicted RBP23.51■■□□□ 1.35
SFI1-228ENST00000524296 CENPBP07199 599 aaPredicted RBP23.5■■□□□ 1.35
SFI1-228ENST00000524296 NEUROD1Q13562 356 aa23.5■■□□□ 1.35
SFI1-228ENST00000524296 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
SFI1-228ENST00000524296 RANGAP1P46060 587 aaPredicted RBP23.5■■□□□ 1.35
SFI1-228ENST00000524296 APLP2Q06481 763 aa23.47■■□□□ 1.35
SFI1-228ENST00000524296 IGF1RP08069 1367 aa23.46■■□□□ 1.35
SFI1-228ENST00000524296 ARAP1Q96P48 1450 aa23.45■■□□□ 1.35
SFI1-228ENST00000524296 POLA1P09884 1462 aaPredicted RBP23.45■■□□□ 1.34
SFI1-228ENST00000524296 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
SFI1-228ENST00000524296 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
SFI1-228ENST00000524296 URB2Q14146 1524 aaKnown RBP23.4■■□□□ 1.34
SFI1-228ENST00000524296 KIF21AQ7Z4S6 1674 aa23.4■■□□□ 1.34
SFI1-228ENST00000524296 ABCA10Q8WWZ4 1543 aa23.39■■□□□ 1.33
SFI1-228ENST00000524296 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
SFI1-228ENST00000524296 CARMIL1Q5VZK9 1371 aa23.34■■□□□ 1.33
SFI1-228ENST00000524296 ARHGAP35Q9NRY4 1499 aa23.33■■□□□ 1.33
SFI1-228ENST00000524296 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
SFI1-228ENST00000524296 GTF3C3Q9Y5Q9 886 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms