RNA–Protein interactions for RNA: ENST00000523996.1

AC012339.2-201, humanhuman

BASIC

Gene AC012339.2, Length 453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.2-201ENST00000523996 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
AC012339.2-201ENST00000523996 CHIC1Q5VXU3 224 aa16.2■□□□□ 0.18
AC012339.2-201ENST00000523996 SENP3Q9H4L4 574 aaPredicted RBP14.28□□□□□ -0.12
AC012339.2-201ENST00000523996 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.13
AC012339.2-201ENST00000523996 FOXD1Q16676 465 aa13.35□□□□□ -0.27
AC012339.2-201ENST00000523996 PLPPR3Q6T4P5 718 aa13□□□□□ -0.33
AC012339.2-201ENST00000523996 PPP6R1Q9UPN7 881 aa12.68□□□□□ -0.38
AC012339.2-201ENST00000523996 ADRA2BP18089 450 aa12.62□□□□□ -0.39
AC012339.2-201ENST00000523996 PIAS4Q8N2W9 510 aaPredicted RBP12.47□□□□□ -0.41
AC012339.2-201ENST00000523996 MSH5O43196 834 aa12.34□□□□□ -0.43
AC012339.2-201ENST00000523996 POTEDQ86YR6 584 aa11.74□□□□□ -0.53
AC012339.2-201ENST00000523996 NISCHQ9Y2I1 1504 aa11.71□□□□□ -0.53
AC012339.2-201ENST00000523996 MAPK8IP2Q13387 824 aaPredicted RBP11.55□□□□□ -0.56
AC012339.2-201ENST00000523996 SCAF1Q9H7N4 1312 aaKnown RBP11.46□□□□□ -0.57
AC012339.2-201ENST00000523996 PPP4R3CPQ6ZMV5 832 aa11.45□□□□□ -0.58
AC012339.2-201ENST00000523996 DMRT2Q9Y5R5 561 aa11.39□□□□□ -0.59
AC012339.2-201ENST00000523996 CNKSR2Q8WXI2 1034 aa11.17□□□□□ -0.62
AC012339.2-201ENST00000523996 HOXD11P31277 338 aaPredicted RBP11.07□□□□□ -0.64
AC012339.2-201ENST00000523996 RNF216Q9NWF9 866 aaPredicted RBP11.02□□□□□ -0.65
AC012339.2-201ENST00000523996 NCBP3Q53F19 620 aaKnown RBP11.01□□□□□ -0.65
AC012339.2-201ENST00000523996 NPM3O75607 178 aaKnown RBP10.93□□□□□ -0.66
AC012339.2-201ENST00000523996 KCNA4P22459 653 aa10.91□□□□□ -0.66
AC012339.2-201ENST00000523996 DCAF8L1A6NGE4 600 aa10.85□□□□□ -0.67
AC012339.2-201ENST00000523996 DNAJC5BQ9UF47 199 aa10.66□□□□□ -0.7
AC012339.2-201ENST00000523996 RNF39Q9H2S5 420 aa10.59□□□□□ -0.71
AC012339.2-201ENST00000523996 CCDC180Q9P1Z9 1646 aa10.54□□□□□ -0.72
AC012339.2-201ENST00000523996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.49□□□□□ -0.73
AC012339.2-201ENST00000523996 CACNB1Q02641 598 aaPredicted RBP10.46□□□□□ -0.73
AC012339.2-201ENST00000523996 C1QBPQ07021 282 aaKnown RBP10.42□□□□□ -0.74
AC012339.2-201ENST00000523996 SLC4A2P04920 1241 aa10.41□□□□□ -0.74
AC012339.2-201ENST00000523996 ABCC9O60706 1549 aa10.35□□□□□ -0.75
AC012339.2-201ENST00000523996 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
AC012339.2-201ENST00000523996 SLC4A1APQ9BWU0 796 aaKnown RBP10.3□□□□□ -0.76
AC012339.2-201ENST00000523996 SPINK5Q9NQ38 1064 aaPredicted RBP10.14□□□□□ -0.79
AC012339.2-201ENST00000523996 FOXD4L1Q9NU39 408 aa10.08□□□□□ -0.8
AC012339.2-201ENST00000523996 ZBTB22O15209 634 aa10.06□□□□□ -0.8
AC012339.2-201ENST00000523996 CAPN15O75808 1086 aa10.06□□□□□ -0.8
AC012339.2-201ENST00000523996 MYCNP04198 464 aaPredicted RBP10.05□□□□□ -0.8
AC012339.2-201ENST00000523996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.04□□□□□ -0.8
AC012339.2-201ENST00000523996 HNRNPUL2Q1KMD3 747 aaKnown RBP10.04□□□□□ -0.8
AC012339.2-201ENST00000523996 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
AC012339.2-201ENST00000523996 DSG3P32926 999 aa10□□□□□ -0.81
AC012339.2-201ENST00000523996 APLP2Q06481 763 aa9.98□□□□□ -0.81
AC012339.2-201ENST00000523996 TRHP20396 242 aaPredicted RBP9.96□□□□□ -0.82
AC012339.2-201ENST00000523996 RB1CC1Q8TDY2 1594 aa9.94□□□□□ -0.82
AC012339.2-201ENST00000523996 ZNF219Q9P2Y4 722 aaPredicted RBP9.92□□□□□ -0.82
AC012339.2-201ENST00000523996 NACADO15069 1562 aa9.9□□□□□ -0.82
AC012339.2-201ENST00000523996 ATF5Q9Y2D1 282 aaPredicted RBP9.88□□□□□ -0.83
AC012339.2-201ENST00000523996 ABCB7O75027 752 aa9.87□□□□□ -0.83
AC012339.2-201ENST00000523996 ZCCHC6Q5VYS8 1495 aaKnown RBP9.82□□□□□ -0.84
AC012339.2-201ENST00000523996 MYO15BQ96JP2 1530 aa9.82□□□□□ -0.84
AC012339.2-201ENST00000523996 CSRNP3Q8WYN3 585 aa9.78□□□□□ -0.84
AC012339.2-201ENST00000523996 UNC13AQ9UPW8 1703 aa9.78□□□□□ -0.84
AC012339.2-201ENST00000523996 POLA2Q14181 598 aa9.76□□□□□ -0.85
AC012339.2-201ENST00000523996 ATXN8OSP0DMR3 200 aa9.74□□□□□ -0.85
AC012339.2-201ENST00000523996 DCAF8L2P0C7V8 631 aa9.72□□□□□ -0.85
AC012339.2-201ENST00000523996 DCAF1Q9Y4B6 1507 aa9.72□□□□□ -0.85
AC012339.2-201ENST00000523996 EHMT2Q96KQ7 1210 aa9.71□□□□□ -0.86
AC012339.2-201ENST00000523996 BICRAQ9NZM4 1560 aa9.67□□□□□ -0.86
AC012339.2-201ENST00000523996 PABPN1Q86U42 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
AC012339.2-201ENST00000523996 SHROOM4Q9ULL8 1493 aa9.56□□□□□ -0.88
AC012339.2-201ENST00000523996 SCRIBQ14160 1630 aa9.54□□□□□ -0.88
AC012339.2-201ENST00000523996 ZBTB12Q9Y330 459 aaPredicted RBP9.51□□□□□ -0.89
AC012339.2-201ENST00000523996 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.9
AC012339.2-201ENST00000523996 MKRN4PQ13434 485 aaPredicted RBP9.44□□□□□ -0.9
AC012339.2-201ENST00000523996 OSCARQ8IYS5 282 aa9.43□□□□□ -0.9
AC012339.2-201ENST00000523996 CC2D2AQ9P2K1 1620 aa9.41□□□□□ -0.9
AC012339.2-201ENST00000523996 EIF4G1Q04637 1599 aaKnown RBP9.41□□□□□ -0.9
AC012339.2-201ENST00000523996 FBLN2P98095 1184 aa9.38□□□□□ -0.91
AC012339.2-201ENST00000523996 AKT1S1Q96B36 256 aa9.33□□□□□ -0.92
AC012339.2-201ENST00000523996 CECR2Q9BXF3 1484 aa9.33□□□□□ -0.92
AC012339.2-201ENST00000523996 SPDYE2BA6NHP3 402 aa9.27□□□□□ -0.93
AC012339.2-201ENST00000523996 SPDYE6P0CI01 402 aa9.27□□□□□ -0.93
AC012339.2-201ENST00000523996 SPDYE2Q495Y8 402 aa9.27□□□□□ -0.93
AC012339.2-201ENST00000523996 REM2Q8IYK8 340 aaPredicted RBP9.26□□□□□ -0.93
AC012339.2-201ENST00000523996 POTEHQ6S545 545 aa9.22□□□□□ -0.93
AC012339.2-201ENST00000523996 CHRDL2Q6WN34 429 aa9.21□□□□□ -0.94
AC012339.2-201ENST00000523996 SSUH2Q9Y2M2 353 aa9.21□□□□□ -0.94
AC012339.2-201ENST00000523996 ZNF692Q9BU19 519 aaPredicted RBP9.2□□□□□ -0.94
AC012339.2-201ENST00000523996 PITPNM1O00562 1244 aa9.16□□□□□ -0.94
AC012339.2-201ENST00000523996 SMARCA4P51532 1647 aa9.13□□□□□ -0.95
AC012339.2-201ENST00000523996 NCAPD3P42695 1498 aa9.12□□□□□ -0.95
AC012339.2-201ENST00000523996 ATAD2BQ9ULI0 1458 aa9.09□□□□□ -0.95
AC012339.2-201ENST00000523996 SMARCA2P51531 1590 aa9.09□□□□□ -0.95
AC012339.2-201ENST00000523996 BAZ1AQ9NRL2 1556 aaPredicted RBP9.09□□□□□ -0.95
AC012339.2-201ENST00000523996 HMGXB3Q12766 1538 aa9.08□□□□□ -0.96
AC012339.2-201ENST00000523996 PEG3Q9GZU2 1588 aa9.07□□□□□ -0.96
AC012339.2-201ENST00000523996 PIP4P2Q8N4L2 257 aa9.06□□□□□ -0.96
AC012339.2-201ENST00000523996 MROH2BQ7Z745 1585 aa9.06□□□□□ -0.96
AC012339.2-201ENST00000523996 FXR2P51116 673 aaKnown RBP eCLIP9.05□□□□□ -0.96
AC012339.2-201ENST00000523996 SPDYE1Q8NFV5 336 aaPredicted RBP9.05□□□□□ -0.96
AC012339.2-201ENST00000523996 RSF1Q96T23 1441 aaPredicted RBP9.05□□□□□ -0.96
AC012339.2-201ENST00000523996 SPDYE4A6NLX3 237 aa9.04□□□□□ -0.96
AC012339.2-201ENST00000523996 SUPT5HO00267 1087 aaKnown RBP9.04□□□□□ -0.96
AC012339.2-201ENST00000523996 CLEC11AQ9Y240 323 aa9.03□□□□□ -0.96
AC012339.2-201ENST00000523996 BAZ1BQ9UIG0 1483 aaKnown RBP9.01□□□□□ -0.97
AC012339.2-201ENST00000523996 WIZO95785 1651 aa8.95□□□□□ -0.98
AC012339.2-201ENST00000523996 NESP48681 1621 aa8.93□□□□□ -0.98
AC012339.2-201ENST00000523996 LAMC3Q9Y6N6 1575 aa8.92□□□□□ -0.98
AC012339.2-201ENST00000523996 CUX2O14529 1486 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms