RNA–Protein interactions for RNA: ENST00000523460.5

ARFGAP1-218, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 4

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-218ENST00000523460 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.98□□□□□ -0.013e-6■■■■■ 71
ARFGAP1-218ENST00000523460 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.17□□□□□ -0.36e-13■■■■■ 49.1
ARFGAP1-218ENST00000523460 RBFOX2O43251 390 aaKnown RBP eCLIP10.77□□□□□ -0.694e-21■■■■■ 46.8
ARFGAP1-218ENST00000523460 SSBP05455 408 aaKnown RBP eCLIP15.71■□□□□ 0.111e-10■■■■■ 35.6
ARFGAP1-218ENST00000523460 SF3B4Q15427 424 aaKnown RBP eCLIP12.71□□□□□ -0.372e-8■■■■■ 32.2
ARFGAP1-218ENST00000523460 SF3B1O75533 1304 aaKnown RBP eCLIP15.52■□□□□ 0.084e-7■■■■■ 31.1
ARFGAP1-218ENST00000523460 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.31■□□□□ 0.362e-7■■■■■ 28.9
ARFGAP1-218ENST00000523460 PCBP1Q15365 356 aaKnown RBP eCLIP15.57■□□□□ 0.082e-6■■■■□ 25.6
ARFGAP1-218ENST00000523460 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.44■□□□□ 0.066e-7■■■■□ 24.2
ARFGAP1-218ENST00000523460 EFTUD2Q15029 972 aaKnown RBP eCLIP13.19□□□□□ -0.36e-7■■■■□ 23.5
ARFGAP1-218ENST00000523460 DDX3XO00571 662 aaKnown RBP eCLIP14.15□□□□□ -0.141e-9■■■■□ 23.4
ARFGAP1-218ENST00000523460 AQRO60306 1485 aaKnown RBP eCLIP25.83■■□□□ 1.735e-7■■■■□ 23.1
ARFGAP1-218ENST00000523460 HNRNPKP61978 463 aaKnown RBP eCLIP14.25□□□□□ -0.137e-8■■■■□ 21.3
ARFGAP1-218ENST00000523460 RBM5P52756 815 aaKnown RBP eCLIP17.74■□□□□ 0.431e-8■■■■□ 19.8
ARFGAP1-218ENST00000523460 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.95■□□□□ 0.32e-8■■■□□ 18.6
ARFGAP1-218ENST00000523460 GTF2F1P35269 517 aaKnown RBP eCLIP16.03■□□□□ 0.161e-9■■■□□ 18.1
ARFGAP1-218ENST00000523460 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.74□□□□□ -0.534e-8■■■□□ 17.8
ARFGAP1-218ENST00000523460 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.65□□□□□ -0.062e-6■■■□□ 17.7
ARFGAP1-218ENST00000523460 NONOQ15233 471 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■■□□ 17.5
ARFGAP1-218ENST00000523460 RBM15Q96T37 977 aaKnown RBP eCLIP14.13□□□□□ -0.153e-8■■■□□ 17.1
ARFGAP1-218ENST00000523460 WDR43Q15061 677 aaKnown RBP eCLIP18.42■□□□□ 0.546e-7■■■□□ 17.1
ARFGAP1-218ENST00000523460 SRSF1Q07955 248 aaKnown RBP eCLIP13.76□□□□□ -0.211e-6■■■□□ 16.8
ARFGAP1-218ENST00000523460 LARP4Q71RC2 724 aaKnown RBP eCLIP12.73□□□□□ -0.375e-8■■■□□ 16.5
ARFGAP1-218ENST00000523460 EWSR1Q01844 656 aaKnown RBP eCLIP10.51□□□□□ -0.732e-7■■■□□ 16.4
ARFGAP1-218ENST00000523460 SMNDC1O75940 238 aaKnown RBP eCLIP12.69□□□□□ -0.381e-7■■■□□ 16.1
ARFGAP1-218ENST00000523460 NCBP2P52298 156 aaKnown RBP eCLIP12.7□□□□□ -0.383e-6■■■□□ 16.1
ARFGAP1-218ENST00000523460 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.332e-13■■■□□ 15.6
ARFGAP1-218ENST00000523460 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.13■□□□□ 0.333e-16■■■□□ 15.4
ARFGAP1-218ENST00000523460 HNRNPMP52272 730 aaKnown RBP eCLIP22.78■■□□□ 1.245e-16■■■□□ 15.4
ARFGAP1-218ENST00000523460 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.2□□□□□ -0.462e-9■■■□□ 15.3
ARFGAP1-218ENST00000523460 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.72■□□□□ 0.272e-6■■□□□ 14.4
ARFGAP1-218ENST00000523460 PRPF4O43172 522 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■□□□ 14.4
ARFGAP1-218ENST00000523460 SRSF7Q16629 238 aaKnown RBP eCLIP11.03□□□□□ -0.648e-10■■□□□ 14.2
ARFGAP1-218ENST00000523460 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.53□□□□□ -0.241e-10■■□□□ 14.1
ARFGAP1-218ENST00000523460 CDC40O60508 579 aaKnown RBP eCLIP13.1□□□□□ -0.314e-7■■□□□ 14.1
ARFGAP1-218ENST00000523460 SF3A3Q12874 501 aaKnown RBP eCLIP12.54□□□□□ -0.43e-7■■□□□ 14
ARFGAP1-218ENST00000523460 NIPBLQ6KC79 2804 aaeCLIP12.65□□□□□ -0.384e-6■■□□□ 13.9
ARFGAP1-218ENST00000523460 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.56■□□□□ 0.241e-8■■□□□ 13.7
ARFGAP1-218ENST00000523460 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.6■□□□□ 0.253e-9■■□□□ 13.6
ARFGAP1-218ENST00000523460 RBM22Q9NW64 420 aaKnown RBP eCLIP13.98□□□□□ -0.171e-8■■□□□ 13.1
ARFGAP1-218ENST00000523460 DDX42Q86XP3 938 aaKnown RBP eCLIP14.88□□□□□ -0.036e-7■■□□□ 13
ARFGAP1-218ENST00000523460 PPIGQ13427 754 aaKnown RBP eCLIP16.54■□□□□ 0.241e-12■■□□□ 12.7
ARFGAP1-218ENST00000523460 EIF3HO15372 352 aaKnown RBP eCLIP13.4□□□□□ -0.264e-12■■□□□ 12.7
ARFGAP1-218ENST00000523460 ZNF622Q969S3 477 aaKnown RBP eCLIP18.76■□□□□ 0.591e-6■■□□□ 12.2
ARFGAP1-218ENST00000523460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.2■■□□□ 1.141e-7■■□□□ 12
ARFGAP1-218ENST00000523460 U2AF2P26368 475 aaKnown RBP eCLIP15.48■□□□□ 0.072e-6■■□□□ 11.9
ARFGAP1-218ENST00000523460 U2AF1Q01081 240 aaKnown RBP eCLIP18.87■□□□□ 0.618e-11■■□□□ 11.7
ARFGAP1-218ENST00000523460 XRCC6P12956 609 aaKnown RBP eCLIP15.55■□□□□ 0.085e-6■■□□□ 11.5
ARFGAP1-218ENST00000523460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.04■■□□□ 1.125e-11■□□□□ 11.1
ARFGAP1-218ENST00000523460 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.87□□□□□ -0.355e-9■□□□□ 11
ARFGAP1-218ENST00000523460 ZRANB2O95218 330 aaKnown RBP eCLIP13.87□□□□□ -0.193e-7■□□□□ 10.9
ARFGAP1-218ENST00000523460 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.023e-12■□□□□ 10.4
ARFGAP1-218ENST00000523460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.47■■□□□ 1.351e-6■□□□□ 10.3
ARFGAP1-218ENST00000523460 TIA1P31483 386 aaKnown RBP eCLIP12.75□□□□□ -0.377e-11■□□□□ 10.3
ARFGAP1-218ENST00000523460 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.83□□□□□ -0.042e-6■□□□□ 10.2
ARFGAP1-218ENST00000523460 DDX6P26196 483 aaKnown RBP eCLIP15.06■□□□□ 01e-11■□□□□ 10.1
ARFGAP1-218ENST00000523460 SUB1P53999 127 aaKnown RBP eCLIP10.55□□□□□ -0.722e-6■□□□□ 10.1
ARFGAP1-218ENST00000523460 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.33□□□□□ -0.124e-8■□□□□ 10
ARFGAP1-218ENST00000523460 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.29□□□□□ -0.287e-8■□□□□ 10
ARFGAP1-218ENST00000523460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.36■□□□□ 0.694e-13■□□□□ 9.9
ARFGAP1-218ENST00000523460 HNRNPCP07910 306 aaKnown RBP eCLIP10.28□□□□□ -0.762e-9■□□□□ 9.8
ARFGAP1-218ENST00000523460 AATFQ9NY61 560 aaKnown RBP eCLIP17.31■□□□□ 0.361e-6■□□□□ 9.7
ARFGAP1-218ENST00000523460 LSM11P83369 360 aaKnown RBP eCLIP12.21□□□□□ -0.453e-6■□□□□ 9.4
ARFGAP1-218ENST00000523460 PCBP2Q15366 365 aaKnown RBP eCLIP12.99□□□□□ -0.333e-6■□□□□ 8.8
ARFGAP1-218ENST00000523460 FKBP4Q02790 459 aaKnown RBP eCLIP18.55■□□□□ 0.565e-6■□□□□ 8.8
ARFGAP1-218ENST00000523460 FTOQ9C0B1 505 aaKnown RBP eCLIP16.34■□□□□ 0.216e-6■□□□□ 8.1
ARFGAP1-218ENST00000523460 PTBP1P26599 531 aaKnown RBP eCLIP10.91□□□□□ -0.662e-7■□□□□ 8.1
ARFGAP1-218ENST00000523460 PUM1Q14671 1186 aaKnown RBP eCLIP15.12■□□□□ 0.018e-6■□□□□ 8.1
Retrieved 68 of 68 RNA–protein pairs in 10.7 ms