RNA–Protein interactions for RNA: ENST00000523277.6

GINS4-209, Transcript of GINS complex subunit 4, humanhuman

TSL 5 BASIC

Gene GINS4, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-209ENST00000523277 SLC24A1O60721 1099 aa18.08■□□□□ 0.49
GINS4-209ENST00000523277 MYT1Q01538 1121 aa17.98■□□□□ 0.47
GINS4-209ENST00000523277 PELP1Q8IZL8 1130 aaKnown RBP17.88■□□□□ 0.45
GINS4-209ENST00000523277 TTBK1Q5TCY1 1321 aaPredicted RBP17.44■□□□□ 0.38
GINS4-209ENST00000523277 ERICH6Q7L0X2 663 aa17.1■□□□□ 0.33
GINS4-209ENST00000523277 PRKCSHP14314 528 aaPredicted RBP17.04■□□□□ 0.32
GINS4-209ENST00000523277 DAXXQ9UER7 740 aaPredicted RBP16.8■□□□□ 0.28
GINS4-209ENST00000523277 APLP2Q06481 763 aa16.66■□□□□ 0.26
GINS4-209ENST00000523277 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
GINS4-209ENST00000523277 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
GINS4-209ENST00000523277 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
GINS4-209ENST00000523277 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
GINS4-209ENST00000523277 RANGAP1P46060 587 aaPredicted RBP15.84■□□□□ 0.13
GINS4-209ENST00000523277 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.13
GINS4-209ENST00000523277 RTN4Q9NQC3 1192 aaKnown RBP15.78■□□□□ 0.12
GINS4-209ENST00000523277 FAM9AQ8IZU1 332 aaPredicted RBP15.65■□□□□ 0.1
GINS4-209ENST00000523277 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
GINS4-209ENST00000523277 ARXQ96QS3 562 aa15.5■□□□□ 0.07
GINS4-209ENST00000523277 TIMELESSQ9UNS1 1208 aa15.39■□□□□ 0.05
GINS4-209ENST00000523277 PODXL2Q9NZ53 605 aa15.39■□□□□ 0.05
GINS4-209ENST00000523277 KLHL34Q8N239 644 aa15.37■□□□□ 0.05
GINS4-209ENST00000523277 CENPBP07199 599 aaPredicted RBP15.31■□□□□ 0.04
GINS4-209ENST00000523277 TULP1O00294 542 aaPredicted RBP15.28■□□□□ 0.04
GINS4-209ENST00000523277 AMER1Q5JTC6 1135 aaPredicted RBP15.17■□□□□ 0.02
GINS4-209ENST00000523277 HOMEZQ8IX15 550 aa15.17■□□□□ 0.02
GINS4-209ENST00000523277 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
GINS4-209ENST00000523277 NISCHQ9Y2I1 1504 aa15.04■□□□□ -0
GINS4-209ENST00000523277 UBE2Q2Q8WVN8 375 aa14.98□□□□□ -0.01
GINS4-209ENST00000523277 PDIA4P13667 645 aaKnown RBP14.9□□□□□ -0.02
GINS4-209ENST00000523277 PKNOX2Q96KN3 472 aa14.9□□□□□ -0.02
GINS4-209ENST00000523277 HRCP23327 699 aa14.9□□□□□ -0.02
GINS4-209ENST00000523277 NEFLP07196 543 aa14.88□□□□□ -0.03
GINS4-209ENST00000523277 NPM2Q86SE8 214 aaKnown RBP14.83□□□□□ -0.04
GINS4-209ENST00000523277 PDE4CQ08493 712 aa14.82□□□□□ -0.04
GINS4-209ENST00000523277 TAOK2Q9UL54 1235 aa14.8□□□□□ -0.04
GINS4-209ENST00000523277 C14orf37Q86TY3 774 aa14.79□□□□□ -0.04
GINS4-209ENST00000523277 CHIC1Q5VXU3 224 aa14.78□□□□□ -0.04
GINS4-209ENST00000523277 TPRNQ4KMQ1 711 aa14.75□□□□□ -0.05
GINS4-209ENST00000523277 KCNA4P22459 653 aa14.75□□□□□ -0.05
GINS4-209ENST00000523277 AEBP2Q6ZN18 517 aaPredicted RBP14.74□□□□□ -0.05
GINS4-209ENST00000523277 ANO8Q9HCE9 1232 aaPredicted RBP14.74□□□□□ -0.05
GINS4-209ENST00000523277 ANP32EQ9BTT0 268 aa14.72□□□□□ -0.05
GINS4-209ENST00000523277 HAP1P54257 671 aaPredicted RBP14.67□□□□□ -0.06
GINS4-209ENST00000523277 BCANQ96GW7 911 aa14.54□□□□□ -0.08
GINS4-209ENST00000523277 GTF3C3Q9Y5Q9 886 aa14.52□□□□□ -0.08
GINS4-209ENST00000523277 CSRNP3Q8WYN3 585 aa14.49□□□□□ -0.09
GINS4-209ENST00000523277 TAF7LQ5H9L4 462 aa14.47□□□□□ -0.09
GINS4-209ENST00000523277 CHMP4AQ9BY43 222 aa14.47□□□□□ -0.09
GINS4-209ENST00000523277 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
GINS4-209ENST00000523277 BCL11BQ9C0K0 894 aaPredicted RBP14.45□□□□□ -0.1
GINS4-209ENST00000523277 DHX37Q8IY37 1157 aaKnown RBP14.45□□□□□ -0.1
GINS4-209ENST00000523277 A0A0U1RQG5 324 aaPredicted RBP14.39□□□□□ -0.11
GINS4-209ENST00000523277 ZEB1P37275 1124 aaPredicted RBP14.36□□□□□ -0.11
GINS4-209ENST00000523277 PPARGC1BQ86YN6 1023 aaKnown RBP14.36□□□□□ -0.11
GINS4-209ENST00000523277 CCDC136Q96JN2 1154 aa14.36□□□□□ -0.11
GINS4-209ENST00000523277 CDK11BP21127 795 aaKnown RBP14.34□□□□□ -0.11
GINS4-209ENST00000523277 CDK11AQ9UQ88 783 aaPredicted RBP14.34□□□□□ -0.11
GINS4-209ENST00000523277 LOC105371045A0A1W2PR82 267 aa14.34□□□□□ -0.11
GINS4-209ENST00000523277 BRD2P25440 801 aaKnown RBP14.34□□□□□ -0.11
GINS4-209ENST00000523277 ACIN1Q9UKV3 1341 aaKnown RBP14.31□□□□□ -0.12
GINS4-209ENST00000523277 FBXO3Q9UK99 471 aa14.3□□□□□ -0.12
GINS4-209ENST00000523277 FGD1P98174 961 aa14.3□□□□□ -0.12
GINS4-209ENST00000523277 POLR3GLQ9BT43 218 aa14.27□□□□□ -0.13
GINS4-209ENST00000523277 CLSPNQ9HAW4 1339 aa14.26□□□□□ -0.13
GINS4-209ENST00000523277 GLIPR1L2Q4G1C9 344 aa14.26□□□□□ -0.13
GINS4-209ENST00000523277 SALL2Q9Y467 1007 aaPredicted RBP14.25□□□□□ -0.13
GINS4-209ENST00000523277 TRIM26Q12899 539 aaPredicted RBP14.24□□□□□ -0.13
GINS4-209ENST00000523277 SUPT5HO00267 1087 aaKnown RBP14.23□□□□□ -0.13
GINS4-209ENST00000523277 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
GINS4-209ENST00000523277 ZNF326Q5BKZ1 582 aaKnown RBP14.15□□□□□ -0.15
GINS4-209ENST00000523277 ERICH6BQ5W0A0 696 aa14.13□□□□□ -0.15
GINS4-209ENST00000523277 PAXIP1Q6ZW49 1069 aaPredicted RBP14.13□□□□□ -0.15
GINS4-209ENST00000523277 NAP1L5Q96NT1 182 aaPredicted RBP14.1□□□□□ -0.15
GINS4-209ENST00000523277 TMEM132AQ24JP5 1023 aa14.07□□□□□ -0.16
GINS4-209ENST00000523277 DEKP35659 375 aaKnown RBP14.06□□□□□ -0.16
GINS4-209ENST00000523277 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.04□□□□□ -0.16
GINS4-209ENST00000523277 NEUROD1Q13562 356 aa14.03□□□□□ -0.16
GINS4-209ENST00000523277 HSP90B1P14625 803 aaKnown RBP14.02□□□□□ -0.17
GINS4-209ENST00000523277 CNKSR2Q8WXI2 1034 aa14.01□□□□□ -0.17
GINS4-209ENST00000523277 AAMPQ13685 434 aa14.01□□□□□ -0.17
GINS4-209ENST00000523277 PLCB2Q00722 1185 aa14□□□□□ -0.17
GINS4-209ENST00000523277 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
GINS4-209ENST00000523277 RBM10P98175 930 aaKnown RBP13.98□□□□□ -0.17
GINS4-209ENST00000523277 UBTFP17480 764 aaKnown RBP13.96□□□□□ -0.17
GINS4-209ENST00000523277 MYT1LQ9UL68 1186 aa13.96□□□□□ -0.18
GINS4-209ENST00000523277 CFAP44Q96MT7 982 aa13.93□□□□□ -0.18
GINS4-209ENST00000523277 ZMYND15Q9H091 742 aa13.88□□□□□ -0.19
GINS4-209ENST00000523277 VSIG10Q8N0Z9 540 aa13.87□□□□□ -0.19
GINS4-209ENST00000523277 RSPH4AQ5TD94 716 aa13.84□□□□□ -0.19
GINS4-209ENST00000523277 RSPH6AQ9H0K4 717 aa13.83□□□□□ -0.2
GINS4-209ENST00000523277 BCCIPQ9P287 314 aaKnown RBP eCLIP13.83□□□□□ -0.2
GINS4-209ENST00000523277 CCDC9Q9Y3X0 531 aaKnown RBP13.83□□□□□ -0.2
GINS4-209ENST00000523277 HMGB1P09429 215 aaKnown RBP13.82□□□□□ -0.2
GINS4-209ENST00000523277 IGSF3O75054 1194 aa13.74□□□□□ -0.21
GINS4-209ENST00000523277 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
GINS4-209ENST00000523277 PCGF6Q9BYE7 350 aa13.73□□□□□ -0.21
GINS4-209ENST00000523277 NAP1L2Q9ULW6 460 aaPredicted RBP13.68□□□□□ -0.22
GINS4-209ENST00000523277 YTHDC1Q96MU7 727 aaKnown RBP13.64□□□□□ -0.23
GINS4-209ENST00000523277 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.64□□□□□ -0.23
GINS4-209ENST00000523277 NCLP19338 710 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms