RNA–Protein interactions for RNA: ENST00000522973.1

AC002428.2-201, humanhuman

TSL 3 BASIC

Gene AC002428.2, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002428.2-201ENST00000522973 NISCHQ9Y2I1 1504 aa11.51□□□□□ -0.57
AC002428.2-201ENST00000522973 CCDC180Q9P1Z9 1646 aa10.3□□□□□ -0.76
AC002428.2-201ENST00000522973 ABCC9O60706 1549 aa9.8□□□□□ -0.84
AC002428.2-201ENST00000522973 ZCCHC6Q5VYS8 1495 aaKnown RBP9.65□□□□□ -0.87
AC002428.2-201ENST00000522973 UNC13AQ9UPW8 1703 aa9.56□□□□□ -0.88
AC002428.2-201ENST00000522973 DCAF1Q9Y4B6 1507 aa9.56□□□□□ -0.88
AC002428.2-201ENST00000522973 NACADO15069 1562 aa9.54□□□□□ -0.88
AC002428.2-201ENST00000522973 RB1CC1Q8TDY2 1594 aa9.54□□□□□ -0.88
AC002428.2-201ENST00000522973 MYO15BQ96JP2 1530 aa9.53□□□□□ -0.88
AC002428.2-201ENST00000522973 DCAF8L2P0C7V8 631 aa9.36□□□□□ -0.91
AC002428.2-201ENST00000522973 SCRIBQ14160 1630 aa9.34□□□□□ -0.91
AC002428.2-201ENST00000522973 BICRAQ9NZM4 1560 aa9.3□□□□□ -0.92
AC002428.2-201ENST00000522973 SHROOM4Q9ULL8 1493 aa9.15□□□□□ -0.95
AC002428.2-201ENST00000522973 PABPN1Q86U42 306 aaKnown RBP eCLIP9.09□□□□□ -0.95
AC002428.2-201ENST00000522973 EIF4G1Q04637 1599 aaKnown RBP9□□□□□ -0.97
AC002428.2-201ENST00000522973 SMARCA4P51532 1647 aa8.97□□□□□ -0.97
AC002428.2-201ENST00000522973 CC2D2AQ9P2K1 1620 aa8.94□□□□□ -0.98
AC002428.2-201ENST00000522973 CECR2Q9BXF3 1484 aa8.94□□□□□ -0.98
AC002428.2-201ENST00000522973 BAZ1AQ9NRL2 1556 aaPredicted RBP8.92□□□□□ -0.98
AC002428.2-201ENST00000522973 MROH2BQ7Z745 1585 aa8.89□□□□□ -0.99
AC002428.2-201ENST00000522973 PEG3Q9GZU2 1588 aa8.87□□□□□ -0.99
AC002428.2-201ENST00000522973 WIZO95785 1651 aa8.86□□□□□ -0.99
AC002428.2-201ENST00000522973 DNAJC5BQ9UF47 199 aa8.82□□□□□ -1
AC002428.2-201ENST00000522973 SMARCA2P51531 1590 aa8.82□□□□□ -1
AC002428.2-201ENST00000522973 HMGXB3Q12766 1538 aa8.8□□□□□ -1
AC002428.2-201ENST00000522973 ATAD2BQ9ULI0 1458 aa8.8□□□□□ -1
AC002428.2-201ENST00000522973 RSF1Q96T23 1441 aaPredicted RBP8.78□□□□□ -1
AC002428.2-201ENST00000522973 NCAPD3P42695 1498 aa8.76□□□□□ -1.01
AC002428.2-201ENST00000522973 TOP2AP11388 1531 aaKnown RBP8.73□□□□□ -1.01
AC002428.2-201ENST00000522973 BAZ1BQ9UIG0 1483 aaKnown RBP8.72□□□□□ -1.01
AC002428.2-201ENST00000522973 PRDM2Q13029 1718 aa8.71□□□□□ -1.02
AC002428.2-201ENST00000522973 KIF21AQ7Z4S6 1674 aa8.59□□□□□ -1.03
AC002428.2-201ENST00000522973 LAMC3Q9Y6N6 1575 aa8.57□□□□□ -1.04
AC002428.2-201ENST00000522973 CCDC88BA6NC98 1476 aa8.57□□□□□ -1.04
AC002428.2-201ENST00000522973 NESP48681 1621 aa8.55□□□□□ -1.04
AC002428.2-201ENST00000522973 SUPT5HO00267 1087 aaKnown RBP8.55□□□□□ -1.04
AC002428.2-201ENST00000522973 CFTRP13569 1480 aa8.5□□□□□ -1.05
AC002428.2-201ENST00000522973 THOC2Q8NI27 1593 aaKnown RBP8.48□□□□□ -1.05
AC002428.2-201ENST00000522973 CADPSQ9ULU8 1353 aa8.47□□□□□ -1.05
AC002428.2-201ENST00000522973 FANCD2Q9BXW9 1451 aa8.42□□□□□ -1.06
AC002428.2-201ENST00000522973 CEP164Q9UPV0 1460 aa8.4□□□□□ -1.06
AC002428.2-201ENST00000522973 ERCC6Q03468 1493 aa8.39□□□□□ -1.07
AC002428.2-201ENST00000522973 PDS5BQ9NTI5 1447 aa8.39□□□□□ -1.07
AC002428.2-201ENST00000522973 WDR62O43379 1518 aa8.39□□□□□ -1.07
AC002428.2-201ENST00000522973 BIVM-ERCC5R4GMW8 1640 aa8.38□□□□□ -1.07
AC002428.2-201ENST00000522973 URB2Q14146 1524 aaKnown RBP8.37□□□□□ -1.07
AC002428.2-201ENST00000522973 MRC2Q9UBG0 1479 aa8.37□□□□□ -1.07
AC002428.2-201ENST00000522973 DNMBPQ6XZF7 1577 aa8.36□□□□□ -1.07
AC002428.2-201ENST00000522973 ABCC8Q09428 1581 aa8.35□□□□□ -1.07
AC002428.2-201ENST00000522973 WDR97A6NE52 1622 aa8.35□□□□□ -1.07
AC002428.2-201ENST00000522973 SYNJ1O43426 1573 aa8.34□□□□□ -1.07
AC002428.2-201ENST00000522973 CUX1P39880 1505 aa8.34□□□□□ -1.08
AC002428.2-201ENST00000522973 TOPBP1Q92547 1522 aa8.34□□□□□ -1.08
AC002428.2-201ENST00000522973 TOP2BQ02880 1626 aa8.32□□□□□ -1.08
AC002428.2-201ENST00000522973 CUX2O14529 1486 aa8.3□□□□□ -1.08
AC002428.2-201ENST00000522973 TARBP1Q13395 1621 aaKnown RBP8.29□□□□□ -1.08
AC002428.2-201ENST00000522973 POLA1P09884 1462 aaPredicted RBP8.26□□□□□ -1.09
AC002428.2-201ENST00000522973 PBRM1Q86U86 1689 aa8.26□□□□□ -1.09
AC002428.2-201ENST00000522973 WRNQ14191 1432 aaPredicted RBP eCLIP8.26□□□□□ -1.09
AC002428.2-201ENST00000522973 FGD5Q6ZNL6 1462 aa8.26□□□□□ -1.09
AC002428.2-201ENST00000522973 EIF4G3O43432 1585 aaKnown RBP8.24□□□□□ -1.09
AC002428.2-201ENST00000522973 ABCA5Q8WWZ7 1642 aa8.23□□□□□ -1.09
AC002428.2-201ENST00000522973 IFT140Q96RY7 1462 aa8.2□□□□□ -1.1
AC002428.2-201ENST00000522973 RAD54L2Q9Y4B4 1467 aa8.2□□□□□ -1.1
AC002428.2-201ENST00000522973 ZNF608Q9ULD9 1512 aaPredicted RBP8.19□□□□□ -1.1
AC002428.2-201ENST00000522973 CHD1O14646 1710 aa8.19□□□□□ -1.1
AC002428.2-201ENST00000522973 ABCA10Q8WWZ4 1543 aa8.19□□□□□ -1.1
AC002428.2-201ENST00000522973 SOGA1O94964 1423 aa8.15□□□□□ -1.1
AC002428.2-201ENST00000522973 ADAMTS12P58397 1594 aa8.12□□□□□ -1.11
AC002428.2-201ENST00000522973 CUL7Q14999 1698 aa8.11□□□□□ -1.11
AC002428.2-201ENST00000522973 AQRO60306 1485 aaKnown RBP eCLIP8.11□□□□□ -1.11
AC002428.2-201ENST00000522973 ERICH3Q5RHP9 1530 aa8.1□□□□□ -1.11
AC002428.2-201ENST00000522973 GAPVD1Q14C86 1478 aa8.1□□□□□ -1.11
AC002428.2-201ENST00000522973 TDRD9Q8NDG6 1382 aaKnown RBP8.1□□□□□ -1.11
AC002428.2-201ENST00000522973 CHIC1Q5VXU3 224 aa8.09□□□□□ -1.11
AC002428.2-201ENST00000522973 RUSC2Q8N2Y8 1516 aa8.08□□□□□ -1.12
AC002428.2-201ENST00000522973 GRIN2BQ13224 1484 aa8.08□□□□□ -1.12
AC002428.2-201ENST00000522973 SNAPC4Q5SXM2 1469 aa8.07□□□□□ -1.12
AC002428.2-201ENST00000522973 MAGI1Q96QZ7 1491 aaPredicted RBP8.07□□□□□ -1.12
AC002428.2-201ENST00000522973 CTTNBP2Q8WZ74 1663 aa8.07□□□□□ -1.12
AC002428.2-201ENST00000522973 KIF27Q86VH2 1401 aa8.05□□□□□ -1.12
AC002428.2-201ENST00000522973 TRIM41Q8WV44 630 aa8.05□□□□□ -1.12
AC002428.2-201ENST00000522973 SYNJ2O15056 1496 aa8.02□□□□□ -1.13
AC002428.2-201ENST00000522973 KIF21BO75037 1637 aa8.02□□□□□ -1.13
AC002428.2-201ENST00000522973 CEP170Q5SW79 1584 aa8.01□□□□□ -1.13
AC002428.2-201ENST00000522973 GRIN2AQ12879 1464 aa8□□□□□ -1.13
AC002428.2-201ENST00000522973 CLASP1Q7Z460 1538 aa8□□□□□ -1.13
AC002428.2-201ENST00000522973 FHAD1B1AJZ9 1412 aa8□□□□□ -1.13
AC002428.2-201ENST00000522973 EEA1Q15075 1411 aa8□□□□□ -1.13
AC002428.2-201ENST00000522973 IGF1RP08069 1367 aa7.99□□□□□ -1.13
AC002428.2-201ENST00000522973 SHROOM2Q13796 1616 aa7.99□□□□□ -1.13
AC002428.2-201ENST00000522973 PRXQ9BXM0 1461 aa7.98□□□□□ -1.13
AC002428.2-201ENST00000522973 NUP160Q12769 1436 aa7.96□□□□□ -1.13
AC002428.2-201ENST00000522973 RAPGEF2Q9Y4G8 1499 aa7.95□□□□□ -1.14
AC002428.2-201ENST00000522973 CARMIL1Q5VZK9 1371 aa7.95□□□□□ -1.14
AC002428.2-201ENST00000522973 IQGAP2Q13576 1575 aa7.93□□□□□ -1.14
AC002428.2-201ENST00000522973 RIMBP3CA6NJZ7 1639 aa7.92□□□□□ -1.14
AC002428.2-201ENST00000522973 RIMBP3BA6NNM3 1639 aa7.92□□□□□ -1.14
AC002428.2-201ENST00000522973 RIMBP3Q9UFD9 1639 aa7.92□□□□□ -1.14
AC002428.2-201ENST00000522973 ERCC6L2Q5T890 1561 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms