RNA–Protein interactions for RNA: ENST00000522146.1

MTCL1-212, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-212ENST00000522146 AEBP2Q6ZN18 517 aaPredicted RBP23.1■■□□□ 1.29
MTCL1-212ENST00000522146 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
MTCL1-212ENST00000522146 SENP3Q9H4L4 574 aaPredicted RBP19.71■□□□□ 0.75
MTCL1-212ENST00000522146 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
MTCL1-212ENST00000522146 FOXD1Q16676 465 aa18.38■□□□□ 0.53
MTCL1-212ENST00000522146 PLPPR3Q6T4P5 718 aa17.41■□□□□ 0.38
MTCL1-212ENST00000522146 MSH5O43196 834 aa17.23■□□□□ 0.35
MTCL1-212ENST00000522146 PIAS4Q8N2W9 510 aaPredicted RBP17.15■□□□□ 0.34
MTCL1-212ENST00000522146 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
MTCL1-212ENST00000522146 ADRA2BP18089 450 aa17.06■□□□□ 0.32
MTCL1-212ENST00000522146 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
MTCL1-212ENST00000522146 MAPK8IP2Q13387 824 aaPredicted RBP15.69■□□□□ 0.1
MTCL1-212ENST00000522146 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
MTCL1-212ENST00000522146 SCAF1Q9H7N4 1312 aaKnown RBP15.6■□□□□ 0.09
MTCL1-212ENST00000522146 NISCHQ9Y2I1 1504 aa15.57■□□□□ 0.08
MTCL1-212ENST00000522146 PPP4R3CPQ6ZMV5 832 aa15.25■□□□□ 0.03
MTCL1-212ENST00000522146 HOXD11P31277 338 aaPredicted RBP15.01□□□□□ -0.01
MTCL1-212ENST00000522146 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
MTCL1-212ENST00000522146 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
MTCL1-212ENST00000522146 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
MTCL1-212ENST00000522146 CACNB1Q02641 598 aaPredicted RBP14.83□□□□□ -0.04
MTCL1-212ENST00000522146 RNF39Q9H2S5 420 aa14.7□□□□□ -0.06
MTCL1-212ENST00000522146 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
MTCL1-212ENST00000522146 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
MTCL1-212ENST00000522146 C1QBPQ07021 282 aaKnown RBP14.48□□□□□ -0.09
MTCL1-212ENST00000522146 NPM3O75607 178 aaKnown RBP14.43□□□□□ -0.1
MTCL1-212ENST00000522146 ABCC9O60706 1549 aa14.41□□□□□ -0.1
MTCL1-212ENST00000522146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.12
MTCL1-212ENST00000522146 KCNA4P22459 653 aa14.08□□□□□ -0.16
MTCL1-212ENST00000522146 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
MTCL1-212ENST00000522146 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
MTCL1-212ENST00000522146 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
MTCL1-212ENST00000522146 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
MTCL1-212ENST00000522146 CAPN15O75808 1086 aa13.78□□□□□ -0.2
MTCL1-212ENST00000522146 DSG3P32926 999 aa13.74□□□□□ -0.21
MTCL1-212ENST00000522146 APLP2Q06481 763 aa13.59□□□□□ -0.23
MTCL1-212ENST00000522146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
MTCL1-212ENST00000522146 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
MTCL1-212ENST00000522146 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
MTCL1-212ENST00000522146 RB1CC1Q8TDY2 1594 aa13.53□□□□□ -0.24
MTCL1-212ENST00000522146 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
MTCL1-212ENST00000522146 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
MTCL1-212ENST00000522146 ABCB7O75027 752 aa13.46□□□□□ -0.25
MTCL1-212ENST00000522146 PABPN1Q86U42 306 aaKnown RBP eCLIP13.45□□□□□ -0.26
MTCL1-212ENST00000522146 NACADO15069 1562 aa13.39□□□□□ -0.27
MTCL1-212ENST00000522146 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
MTCL1-212ENST00000522146 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
MTCL1-212ENST00000522146 POTEHQ6S545 545 aa13.28□□□□□ -0.28
MTCL1-212ENST00000522146 SLC4A1APQ9BWU0 796 aaKnown RBP13.27□□□□□ -0.29
MTCL1-212ENST00000522146 UNC13AQ9UPW8 1703 aa13.21□□□□□ -0.3
MTCL1-212ENST00000522146 BICRAQ9NZM4 1560 aa13.19□□□□□ -0.3
MTCL1-212ENST00000522146 POLA2Q14181 598 aa13.16□□□□□ -0.3
MTCL1-212ENST00000522146 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
MTCL1-212ENST00000522146 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
MTCL1-212ENST00000522146 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
MTCL1-212ENST00000522146 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
MTCL1-212ENST00000522146 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.33
MTCL1-212ENST00000522146 CECR2Q9BXF3 1484 aa13.02□□□□□ -0.33
MTCL1-212ENST00000522146 CC2D2AQ9P2K1 1620 aa12.98□□□□□ -0.33
MTCL1-212ENST00000522146 ZBTB22O15209 634 aa12.95□□□□□ -0.34
MTCL1-212ENST00000522146 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
MTCL1-212ENST00000522146 ZBTB12Q9Y330 459 aaPredicted RBP12.9□□□□□ -0.34
MTCL1-212ENST00000522146 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
MTCL1-212ENST00000522146 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
MTCL1-212ENST00000522146 DCAF1Q9Y4B6 1507 aa12.82□□□□□ -0.36
MTCL1-212ENST00000522146 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
MTCL1-212ENST00000522146 ZCCHC6Q5VYS8 1495 aaKnown RBP12.78□□□□□ -0.36
MTCL1-212ENST00000522146 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
MTCL1-212ENST00000522146 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
MTCL1-212ENST00000522146 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
MTCL1-212ENST00000522146 REM2Q8IYK8 340 aaPredicted RBP12.67□□□□□ -0.38
MTCL1-212ENST00000522146 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
MTCL1-212ENST00000522146 CUX2O14529 1486 aa12.53□□□□□ -0.4
MTCL1-212ENST00000522146 FBLN2P98095 1184 aa12.53□□□□□ -0.4
MTCL1-212ENST00000522146 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
MTCL1-212ENST00000522146 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
MTCL1-212ENST00000522146 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
MTCL1-212ENST00000522146 SPDYE2Q495Y8 402 aa12.5□□□□□ -0.41
MTCL1-212ENST00000522146 FXR2P51116 673 aaKnown RBP eCLIP12.45□□□□□ -0.425e-6■■□□□ 12.9
MTCL1-212ENST00000522146 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
MTCL1-212ENST00000522146 ERCC6Q03468 1493 aa12.43□□□□□ -0.42
MTCL1-212ENST00000522146 NCAPD3P42695 1498 aa12.42□□□□□ -0.42
MTCL1-212ENST00000522146 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
MTCL1-212ENST00000522146 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
MTCL1-212ENST00000522146 HAX1O00165 279 aa12.32□□□□□ -0.44
MTCL1-212ENST00000522146 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
MTCL1-212ENST00000522146 ATAD2BQ9ULI0 1458 aa12.32□□□□□ -0.44
MTCL1-212ENST00000522146 NESP48681 1621 aa12.3□□□□□ -0.44
MTCL1-212ENST00000522146 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
MTCL1-212ENST00000522146 CSRNP3Q8WYN3 585 aa12.27□□□□□ -0.45
MTCL1-212ENST00000522146 TRIM41Q8WV44 630 aa12.26□□□□□ -0.45
MTCL1-212ENST00000522146 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
MTCL1-212ENST00000522146 SMARCA2P51531 1590 aa12.21□□□□□ -0.46
MTCL1-212ENST00000522146 HMGXB3Q12766 1538 aa12.21□□□□□ -0.46
MTCL1-212ENST00000522146 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
MTCL1-212ENST00000522146 EVX2Q03828 476 aa12.17□□□□□ -0.46
MTCL1-212ENST00000522146 THOC2Q8NI27 1593 aaKnown RBP12.16□□□□□ -0.46
MTCL1-212ENST00000522146 SMARCA4P51532 1647 aa12.15□□□□□ -0.46
MTCL1-212ENST00000522146 BAZ1BQ9UIG0 1483 aaKnown RBP12.13□□□□□ -0.47
MTCL1-212ENST00000522146 PDS5BQ9NTI5 1447 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms