RNA–Protein interactions for RNA: ENST00000521661.5

IKBKB-220, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 5

Gene IKBKB, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-220ENST00000521661 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.2□□□□□ -0.461e-91■■■■■ 230.9
IKBKB-220ENST00000521661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.19□□□□□ -0.462e-14■■■■■ 51.9
IKBKB-220ENST00000521661 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.77□□□□□ -0.365e-12■■■■■ 104.3
IKBKB-220ENST00000521661 QKIQ96PU8 341 aaKnown RBP eCLIP12.08□□□□□ -0.487e-10■■■■■ 37.6
IKBKB-220ENST00000521661 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.76□□□□□ -0.374e-9■■■■■ 126.2
IKBKB-220ENST00000521661 G3BP1Q13283 466 aaKnown RBP eCLIP14.4□□□□□ -0.11e-8■■■■■ 32.6
IKBKB-220ENST00000521661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.78□□□□□ -0.044e-8■■□□□ 13.4
IKBKB-220ENST00000521661 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.24□□□□□ -0.931e-7■■■■■ 30.7
IKBKB-220ENST00000521661 DDX21Q9NR30 783 aaKnown RBP eCLIP14.64□□□□□ -0.071e-7■■■■■ 31
IKBKB-220ENST00000521661 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.62□□□□□ -0.391e-7■■■□□ 15.9
IKBKB-220ENST00000521661 HNRNPCP07910 306 aaKnown RBP eCLIP11.74□□□□□ -0.532e-7■■□□□ 13.4
IKBKB-220ENST00000521661 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.03■□□□□ 0.162e-7■■■■■ 44.1
IKBKB-220ENST00000521661 PCBP2Q15366 365 aaKnown RBP eCLIP11.47□□□□□ -0.572e-7■■■■□ 26
IKBKB-220ENST00000521661 EIF3HO15372 352 aaKnown RBP eCLIP12.89□□□□□ -0.353e-7■■■□□ 17.9
IKBKB-220ENST00000521661 HNRNPMP52272 730 aaKnown RBP eCLIP17.11■□□□□ 0.333e-7■■■■□ 24.6
IKBKB-220ENST00000521661 SF3A3Q12874 501 aaKnown RBP eCLIP12.37□□□□□ -0.434e-7■■□□□ 14.3
IKBKB-220ENST00000521661 PPIGQ13427 754 aaKnown RBP eCLIP12.16□□□□□ -0.464e-7■■■□□ 17.6
IKBKB-220ENST00000521661 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.53□□□□□ -0.45e-7■■■□□ 15.2
IKBKB-220ENST00000521661 SRSF1Q07955 248 aaKnown RBP eCLIP9.77□□□□□ -0.856e-7■■□□□ 12.4
IKBKB-220ENST00000521661 U2AF2P26368 475 aaKnown RBP eCLIP13.68□□□□□ -0.227e-7■■■■■ 30.4
IKBKB-220ENST00000521661 ZNF622Q969S3 477 aaKnown RBP eCLIP13.86□□□□□ -0.191e-6■■□□□ 12.8
IKBKB-220ENST00000521661 SF3B4Q15427 424 aaKnown RBP eCLIP11.31□□□□□ -0.62e-6■■■■■ 50.5
IKBKB-220ENST00000521661 GPKOWQ92917 476 aaPredicted RBP eCLIP13.49□□□□□ -0.252e-6■■■■■ 37.1
IKBKB-220ENST00000521661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.282e-6■■□□□ 12.3
IKBKB-220ENST00000521661 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.262e-6■■■□□ 15
IKBKB-220ENST00000521661 PRPF4O43172 522 aaKnown RBP eCLIP12.28□□□□□ -0.442e-6■■□□□ 11.9
IKBKB-220ENST00000521661 DDX24Q9GZR7 859 aaKnown RBP eCLIP14□□□□□ -0.173e-6■■■■□ 24.2
IKBKB-220ENST00000521661 SF3B1O75533 1304 aaKnown RBP eCLIP12.15□□□□□ -0.464e-6■■■■■ 108.7
IKBKB-220ENST00000521661 HNRNPKP61978 463 aaKnown RBP eCLIP11.09□□□□□ -0.635e-6■■■■□ 20.8
IKBKB-220ENST00000521661 AQRO60306 1485 aaKnown RBP eCLIP18.64■□□□□ 0.576e-6■■■■□ 25.1
IKBKB-220ENST00000521661 TIA1P31483 386 aaKnown RBP eCLIP11.23□□□□□ -0.619e-6■□□□□ 9.6
Retrieved 31 of 31 RNA–protein pairs in 11.8 ms