RNA–Protein interactions for RNA: ENST00000521001.1

TNIP1-209, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 4

Gene TNIP1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-209ENST00000521001 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
TNIP1-209ENST00000521001 CCDC180Q9P1Z9 1646 aa21.91■■□□□ 1.1
TNIP1-209ENST00000521001 ABCC9O60706 1549 aa21.18■□□□□ 0.98
TNIP1-209ENST00000521001 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
TNIP1-209ENST00000521001 NACADO15069 1562 aa20.46■□□□□ 0.87
TNIP1-209ENST00000521001 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
TNIP1-209ENST00000521001 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
TNIP1-209ENST00000521001 DCAF1Q9Y4B6 1507 aa20.42■□□□□ 0.86
TNIP1-209ENST00000521001 UNC13AQ9UPW8 1703 aa20.28■□□□□ 0.84
TNIP1-209ENST00000521001 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
TNIP1-209ENST00000521001 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
TNIP1-209ENST00000521001 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
TNIP1-209ENST00000521001 PABPN1Q86U42 306 aaKnown RBP eCLIP19.77■□□□□ 0.76
TNIP1-209ENST00000521001 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
TNIP1-209ENST00000521001 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
TNIP1-209ENST00000521001 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
TNIP1-209ENST00000521001 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
TNIP1-209ENST00000521001 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
TNIP1-209ENST00000521001 SMARCA4P51532 1647 aa19.14■□□□□ 0.65
TNIP1-209ENST00000521001 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
TNIP1-209ENST00000521001 BAZ1AQ9NRL2 1556 aaPredicted RBP19.04■□□□□ 0.64
TNIP1-209ENST00000521001 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
TNIP1-209ENST00000521001 ATAD2BQ9ULI0 1458 aa18.94■□□□□ 0.62
TNIP1-209ENST00000521001 WIZO95785 1651 aa18.9■□□□□ 0.62
TNIP1-209ENST00000521001 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
TNIP1-209ENST00000521001 SMARCA2P51531 1590 aa18.86■□□□□ 0.61
TNIP1-209ENST00000521001 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
TNIP1-209ENST00000521001 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
TNIP1-209ENST00000521001 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
TNIP1-209ENST00000521001 TOP2AP11388 1531 aaKnown RBP18.61■□□□□ 0.57
TNIP1-209ENST00000521001 NESP48681 1621 aa18.47■□□□□ 0.55
TNIP1-209ENST00000521001 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.54
TNIP1-209ENST00000521001 LAMC3Q9Y6N6 1575 aa18.37■□□□□ 0.53
TNIP1-209ENST00000521001 KIF21AQ7Z4S6 1674 aa18.33■□□□□ 0.52
TNIP1-209ENST00000521001 PRDM2Q13029 1718 aa18.31■□□□□ 0.52
TNIP1-209ENST00000521001 CADPSQ9ULU8 1353 aa18.3■□□□□ 0.52
TNIP1-209ENST00000521001 CFTRP13569 1480 aa18.28■□□□□ 0.52
TNIP1-209ENST00000521001 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
TNIP1-209ENST00000521001 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
TNIP1-209ENST00000521001 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
TNIP1-209ENST00000521001 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
TNIP1-209ENST00000521001 PDS5BQ9NTI5 1447 aa18.1■□□□□ 0.49
TNIP1-209ENST00000521001 WDR62O43379 1518 aa18.03■□□□□ 0.48
TNIP1-209ENST00000521001 CEP164Q9UPV0 1460 aa18.02■□□□□ 0.48
TNIP1-209ENST00000521001 URB2Q14146 1524 aaKnown RBP18.02■□□□□ 0.47
TNIP1-209ENST00000521001 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
TNIP1-209ENST00000521001 CUX2O14529 1486 aa17.95■□□□□ 0.46
TNIP1-209ENST00000521001 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
TNIP1-209ENST00000521001 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
TNIP1-209ENST00000521001 CUX1P39880 1505 aa17.86■□□□□ 0.45
TNIP1-209ENST00000521001 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
TNIP1-209ENST00000521001 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
TNIP1-209ENST00000521001 TARBP1Q13395 1621 aaKnown RBP17.77■□□□□ 0.44
TNIP1-209ENST00000521001 BIVM-ERCC5R4GMW8 1640 aa17.77■□□□□ 0.44
TNIP1-209ENST00000521001 POLA1P09884 1462 aaPredicted RBP17.74■□□□□ 0.43
TNIP1-209ENST00000521001 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
TNIP1-209ENST00000521001 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
TNIP1-209ENST00000521001 FGD5Q6ZNL6 1462 aa17.71■□□□□ 0.43
TNIP1-209ENST00000521001 ZNF608Q9ULD9 1512 aaPredicted RBP17.68■□□□□ 0.42
TNIP1-209ENST00000521001 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
TNIP1-209ENST00000521001 WRNQ14191 1432 aaPredicted RBP eCLIP17.67■□□□□ 0.42
TNIP1-209ENST00000521001 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
TNIP1-209ENST00000521001 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
TNIP1-209ENST00000521001 SOGA1O94964 1423 aa17.57■□□□□ 0.4
TNIP1-209ENST00000521001 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
TNIP1-209ENST00000521001 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
TNIP1-209ENST00000521001 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.42e-9■■■■□ 20.3
TNIP1-209ENST00000521001 PBRM1Q86U86 1689 aa17.52■□□□□ 0.39
TNIP1-209ENST00000521001 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
TNIP1-209ENST00000521001 CHD1O14646 1710 aa17.44■□□□□ 0.38
TNIP1-209ENST00000521001 GAPVD1Q14C86 1478 aa17.4■□□□□ 0.38
TNIP1-209ENST00000521001 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
TNIP1-209ENST00000521001 GRIN2BQ13224 1484 aa17.36■□□□□ 0.37
TNIP1-209ENST00000521001 RUSC2Q8N2Y8 1516 aa17.35■□□□□ 0.37
TNIP1-209ENST00000521001 ADAMTS12P58397 1594 aa17.33■□□□□ 0.37
TNIP1-209ENST00000521001 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
TNIP1-209ENST00000521001 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
TNIP1-209ENST00000521001 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
TNIP1-209ENST00000521001 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
TNIP1-209ENST00000521001 IGF1RP08069 1367 aa17.24■□□□□ 0.35
TNIP1-209ENST00000521001 DNAJC5Q9H3Z4 198 aa17.23■□□□□ 0.35
TNIP1-209ENST00000521001 KIF27Q86VH2 1401 aa17.22■□□□□ 0.35
TNIP1-209ENST00000521001 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.35
TNIP1-209ENST00000521001 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
TNIP1-209ENST00000521001 CUL7Q14999 1698 aa17.2■□□□□ 0.34
TNIP1-209ENST00000521001 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
TNIP1-209ENST00000521001 GRIN2AQ12879 1464 aa17.18■□□□□ 0.34
TNIP1-209ENST00000521001 FHAD1B1AJZ9 1412 aa17.18■□□□□ 0.34
TNIP1-209ENST00000521001 NUP160Q12769 1436 aa17.14■□□□□ 0.33
TNIP1-209ENST00000521001 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
TNIP1-209ENST00000521001 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
TNIP1-209ENST00000521001 PRXQ9BXM0 1461 aa17.08■□□□□ 0.32
TNIP1-209ENST00000521001 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
TNIP1-209ENST00000521001 RIMBP3CA6NJZ7 1639 aa17.07■□□□□ 0.32
TNIP1-209ENST00000521001 RIMBP3BA6NNM3 1639 aa17.07■□□□□ 0.32
TNIP1-209ENST00000521001 RIMBP3Q9UFD9 1639 aa17.07■□□□□ 0.32
TNIP1-209ENST00000521001 CARMIL1Q5VZK9 1371 aa17.07■□□□□ 0.32
TNIP1-209ENST00000521001 FBLN2P98095 1184 aa17.07■□□□□ 0.32
TNIP1-209ENST00000521001 ERCC6L2Q5T890 1561 aa17.04■□□□□ 0.32
TNIP1-209ENST00000521001 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms