RNA–Protein interactions for RNA: ENST00000519789.5

RMDN1-211, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 3

Gene RMDN1, Length 728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-211ENST00000519789 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
RMDN1-211ENST00000519789 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
RMDN1-211ENST00000519789 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
RMDN1-211ENST00000519789 PHF23Q9BUL5 403 aaPredicted RBP17.25■□□□□ 0.35
RMDN1-211ENST00000519789 NISCHQ9Y2I1 1504 aa17.11■□□□□ 0.33
RMDN1-211ENST00000519789 FOXD1Q16676 465 aa16.37■□□□□ 0.21
RMDN1-211ENST00000519789 PLPPR3Q6T4P5 718 aa15.86■□□□□ 0.13
RMDN1-211ENST00000519789 POTEDQ86YR6 584 aa15.57■□□□□ 0.08
RMDN1-211ENST00000519789 MSH5O43196 834 aa15.41■□□□□ 0.06
RMDN1-211ENST00000519789 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
RMDN1-211ENST00000519789 PPP6R1Q9UPN7 881 aa15.1■□□□□ 0.01
RMDN1-211ENST00000519789 ADRA2BP18089 450 aa14.98□□□□□ -0.01
RMDN1-211ENST00000519789 CCDC180Q9P1Z9 1646 aa14.98□□□□□ -0.01
RMDN1-211ENST00000519789 ZCCHC6Q5VYS8 1495 aaKnown RBP14.44□□□□□ -0.1
RMDN1-211ENST00000519789 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
RMDN1-211ENST00000519789 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
RMDN1-211ENST00000519789 DCAF8L2P0C7V8 631 aa14.05□□□□□ -0.16
RMDN1-211ENST00000519789 KCNA4P22459 653 aa14.04□□□□□ -0.16
RMDN1-211ENST00000519789 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
RMDN1-211ENST00000519789 ABCC9O60706 1549 aa13.9□□□□□ -0.18
RMDN1-211ENST00000519789 MYO15BQ96JP2 1530 aa13.87□□□□□ -0.19
RMDN1-211ENST00000519789 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
RMDN1-211ENST00000519789 DMRT2Q9Y5R5 561 aa13.86□□□□□ -0.19
RMDN1-211ENST00000519789 NACADO15069 1562 aa13.81□□□□□ -0.2
RMDN1-211ENST00000519789 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
RMDN1-211ENST00000519789 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
RMDN1-211ENST00000519789 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
RMDN1-211ENST00000519789 RB1CC1Q8TDY2 1594 aa13.69□□□□□ -0.22
RMDN1-211ENST00000519789 SUPT5HO00267 1087 aaKnown RBP13.62□□□□□ -0.23
RMDN1-211ENST00000519789 UNC13AQ9UPW8 1703 aa13.57□□□□□ -0.24
RMDN1-211ENST00000519789 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
RMDN1-211ENST00000519789 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
RMDN1-211ENST00000519789 NPM3O75607 178 aaKnown RBP13.5□□□□□ -0.25
RMDN1-211ENST00000519789 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
RMDN1-211ENST00000519789 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
RMDN1-211ENST00000519789 RSF1Q96T23 1441 aaPredicted RBP13.3□□□□□ -0.28
RMDN1-211ENST00000519789 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
RMDN1-211ENST00000519789 CECR2Q9BXF3 1484 aa13.26□□□□□ -0.29
RMDN1-211ENST00000519789 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
RMDN1-211ENST00000519789 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
RMDN1-211ENST00000519789 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
RMDN1-211ENST00000519789 WIZO95785 1651 aa13.24□□□□□ -0.29
RMDN1-211ENST00000519789 SMARCA4P51532 1647 aa13.21□□□□□ -0.3
RMDN1-211ENST00000519789 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
RMDN1-211ENST00000519789 RNF39Q9H2S5 420 aa13.16□□□□□ -0.3
RMDN1-211ENST00000519789 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
RMDN1-211ENST00000519789 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
RMDN1-211ENST00000519789 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
RMDN1-211ENST00000519789 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
RMDN1-211ENST00000519789 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
RMDN1-211ENST00000519789 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
RMDN1-211ENST00000519789 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
RMDN1-211ENST00000519789 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
RMDN1-211ENST00000519789 C1QBPQ07021 282 aaKnown RBP12.94□□□□□ -0.34
RMDN1-211ENST00000519789 ZBTB22O15209 634 aa12.88□□□□□ -0.35
RMDN1-211ENST00000519789 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
RMDN1-211ENST00000519789 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
RMDN1-211ENST00000519789 BAZ1BQ9UIG0 1483 aaKnown RBP12.84□□□□□ -0.35
RMDN1-211ENST00000519789 ATAD2BQ9ULI0 1458 aa12.84□□□□□ -0.35
RMDN1-211ENST00000519789 TRIM41Q8WV44 630 aa12.78□□□□□ -0.36
RMDN1-211ENST00000519789 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
RMDN1-211ENST00000519789 ABCC8Q09428 1581 aa12.74□□□□□ -0.37
RMDN1-211ENST00000519789 PRDM2Q13029 1718 aa12.68□□□□□ -0.38
RMDN1-211ENST00000519789 NCAPD3P42695 1498 aa12.65□□□□□ -0.38
RMDN1-211ENST00000519789 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
RMDN1-211ENST00000519789 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
RMDN1-211ENST00000519789 LOC105371045A0A1W2PR82 267 aa12.6□□□□□ -0.39
RMDN1-211ENST00000519789 FAM9AQ8IZU1 332 aaPredicted RBP12.59□□□□□ -0.39
RMDN1-211ENST00000519789 SYNJ1O43426 1573 aa12.57□□□□□ -0.4
RMDN1-211ENST00000519789 WRNQ14191 1432 aaPredicted RBP eCLIP12.55□□□□□ -0.4
RMDN1-211ENST00000519789 BIVM-ERCC5R4GMW8 1640 aa12.53□□□□□ -0.4
RMDN1-211ENST00000519789 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
RMDN1-211ENST00000519789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.41
RMDN1-211ENST00000519789 TOP2BQ02880 1626 aa12.49□□□□□ -0.41
RMDN1-211ENST00000519789 EEA1Q15075 1411 aa12.47□□□□□ -0.41
RMDN1-211ENST00000519789 CFTRP13569 1480 aa12.45□□□□□ -0.42
RMDN1-211ENST00000519789 SOGA1O94964 1423 aa12.44□□□□□ -0.42
RMDN1-211ENST00000519789 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
RMDN1-211ENST00000519789 RUSC2Q8N2Y8 1516 aa12.4□□□□□ -0.42
RMDN1-211ENST00000519789 CUX1P39880 1505 aa12.39□□□□□ -0.43
RMDN1-211ENST00000519789 KIF21BO75037 1637 aa12.39□□□□□ -0.43
RMDN1-211ENST00000519789 GOLGA3Q08378 1498 aa12.35□□□□□ -0.43
RMDN1-211ENST00000519789 CADPSQ9ULU8 1353 aa12.35□□□□□ -0.43
RMDN1-211ENST00000519789 CEP164Q9UPV0 1460 aa12.32□□□□□ -0.44
RMDN1-211ENST00000519789 LAMC3Q9Y6N6 1575 aa12.31□□□□□ -0.44
RMDN1-211ENST00000519789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
RMDN1-211ENST00000519789 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
RMDN1-211ENST00000519789 U3KPZ7 1027 aaPredicted RBP12.29□□□□□ -0.44
RMDN1-211ENST00000519789 FANCD2Q9BXW9 1451 aa12.28□□□□□ -0.44
RMDN1-211ENST00000519789 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.45
RMDN1-211ENST00000519789 CEP162Q5TB80 1403 aa12.27□□□□□ -0.45
RMDN1-211ENST00000519789 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
RMDN1-211ENST00000519789 KIF21AQ7Z4S6 1674 aa12.26□□□□□ -0.45
RMDN1-211ENST00000519789 NESP48681 1621 aa12.26□□□□□ -0.45
RMDN1-211ENST00000519789 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
RMDN1-211ENST00000519789 PCGF6Q9BYE7 350 aa12.25□□□□□ -0.45
RMDN1-211ENST00000519789 ERICH3Q5RHP9 1530 aa12.23□□□□□ -0.45
RMDN1-211ENST00000519789 FGD5Q6ZNL6 1462 aa12.23□□□□□ -0.45
RMDN1-211ENST00000519789 UBTFP17480 764 aaKnown RBP12.23□□□□□ -0.45
RMDN1-211ENST00000519789 DSG3P32926 999 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms