RNA–Protein interactions for RNA: ENST00000518668.5

DENND3-208, Transcript of DENN domain containing 3, humanhuman

TSL 5

Gene DENND3, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-208ENST00000518668 NISCHQ9Y2I1 1504 aa24.45■■□□□ 1.5
DENND3-208ENST00000518668 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
DENND3-208ENST00000518668 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
DENND3-208ENST00000518668 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
DENND3-208ENST00000518668 APLP2Q06481 763 aa22.18■■□□□ 1.14
DENND3-208ENST00000518668 EHMT2Q96KQ7 1210 aa22.05■■□□□ 1.12
DENND3-208ENST00000518668 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
DENND3-208ENST00000518668 FAM9AQ8IZU1 332 aaPredicted RBP21.88■■□□□ 1.09
DENND3-208ENST00000518668 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
DENND3-208ENST00000518668 ZEB1P37275 1124 aaPredicted RBP21.74■■□□□ 1.07
DENND3-208ENST00000518668 PCGF6Q9BYE7 350 aa21.68■■□□□ 1.06
DENND3-208ENST00000518668 UBTFP17480 764 aaKnown RBP21.38■■□□□ 1.01
DENND3-208ENST00000518668 CENPBP07199 599 aaPredicted RBP21.37■■□□□ 1.01
DENND3-208ENST00000518668 TTBK1Q5TCY1 1321 aaPredicted RBP21.37■■□□□ 1.01
DENND3-208ENST00000518668 CCER1Q8TC90 406 aaPredicted RBP21.36■■□□□ 1.01
DENND3-208ENST00000518668 RANGAP1P46060 587 aaPredicted RBP21.23■□□□□ 0.99
DENND3-208ENST00000518668 ATP1B4Q9UN42 357 aaPredicted RBP21.14■□□□□ 0.98
DENND3-208ENST00000518668 TRIM26Q12899 539 aaPredicted RBP21.12■□□□□ 0.97
DENND3-208ENST00000518668 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
DENND3-208ENST00000518668 NEFLP07196 543 aa20.82■□□□□ 0.92
DENND3-208ENST00000518668 HRCP23327 699 aa20.82■□□□□ 0.92
DENND3-208ENST00000518668 ERICH6Q7L0X2 663 aa20.81■□□□□ 0.92
DENND3-208ENST00000518668 PPARGC1BQ86YN6 1023 aaKnown RBP20.69■□□□□ 0.9
DENND3-208ENST00000518668 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
DENND3-208ENST00000518668 ABCC9O60706 1549 aa20.62■□□□□ 0.89
DENND3-208ENST00000518668 YTHDC1Q96MU7 727 aaKnown RBP20.57■□□□□ 0.88
DENND3-208ENST00000518668 MYT1Q01538 1121 aa20.55■□□□□ 0.88
DENND3-208ENST00000518668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.49■□□□□ 0.87
DENND3-208ENST00000518668 HNRNPUL2Q1KMD3 747 aaKnown RBP20.49■□□□□ 0.87
DENND3-208ENST00000518668 ITGAEP38570 1179 aa20.47■□□□□ 0.87
DENND3-208ENST00000518668 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
DENND3-208ENST00000518668 ZCCHC6Q5VYS8 1495 aaKnown RBP20.31■□□□□ 0.84
DENND3-208ENST00000518668 MYT1LQ9UL68 1186 aa20.29■□□□□ 0.84
DENND3-208ENST00000518668 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
DENND3-208ENST00000518668 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
DENND3-208ENST00000518668 POLR3GLQ9BT43 218 aa20.16■□□□□ 0.82
DENND3-208ENST00000518668 FAM50AQ14320 339 aaKnown RBP20.15■□□□□ 0.82
DENND3-208ENST00000518668 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.8
DENND3-208ENST00000518668 DAXXQ9UER7 740 aaPredicted RBP20.07■□□□□ 0.8
DENND3-208ENST00000518668 SCRIBQ14160 1630 aa20.01■□□□□ 0.79
DENND3-208ENST00000518668 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
DENND3-208ENST00000518668 DCAF1Q9Y4B6 1507 aa19.9■□□□□ 0.78
DENND3-208ENST00000518668 NEUROD1Q13562 356 aa19.87■□□□□ 0.77
DENND3-208ENST00000518668 ZNF316A6NFI3 1004 aaPredicted RBP19.86■□□□□ 0.77
DENND3-208ENST00000518668 ANP32CO43423 234 aa19.85■□□□□ 0.77
DENND3-208ENST00000518668 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
DENND3-208ENST00000518668 CNGB1Q14028 1251 aaPredicted RBP19.77■□□□□ 0.76
DENND3-208ENST00000518668 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.75
DENND3-208ENST00000518668 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
DENND3-208ENST00000518668 FBLN2P98095 1184 aa19.71■□□□□ 0.75
DENND3-208ENST00000518668 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
DENND3-208ENST00000518668 P3H3Q8IVL6 736 aa19.63■□□□□ 0.73
DENND3-208ENST00000518668 RTL5Q5HYW3 569 aaPredicted RBP19.63■□□□□ 0.73
DENND3-208ENST00000518668 NACADO15069 1562 aa19.63■□□□□ 0.73
DENND3-208ENST00000518668 EEA1Q15075 1411 aa19.62■□□□□ 0.73
DENND3-208ENST00000518668 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
DENND3-208ENST00000518668 GTF3C3Q9Y5Q9 886 aa19.59■□□□□ 0.73
DENND3-208ENST00000518668 RSF1Q96T23 1441 aaPredicted RBP19.52■□□□□ 0.72
DENND3-208ENST00000518668 TONSLQ96HA7 1378 aa19.5■□□□□ 0.71
DENND3-208ENST00000518668 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
DENND3-208ENST00000518668 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
DENND3-208ENST00000518668 CLIP1P30622 1438 aa19.43■□□□□ 0.7
DENND3-208ENST00000518668 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
DENND3-208ENST00000518668 NEFMP07197 916 aa19.41■□□□□ 0.7
DENND3-208ENST00000518668 ZBTB47Q9UFB7 747 aaPredicted RBP19.4■□□□□ 0.7
DENND3-208ENST00000518668 ARID3CA6NKF2 412 aa19.39■□□□□ 0.7
DENND3-208ENST00000518668 BCANQ96GW7 911 aa19.38■□□□□ 0.69
DENND3-208ENST00000518668 CANXP27824 592 aaKnown RBP19.33■□□□□ 0.68
DENND3-208ENST00000518668 MTUS2Q5JR59 1369 aa19.32■□□□□ 0.68
DENND3-208ENST00000518668 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
DENND3-208ENST00000518668 BAZ1BQ9UIG0 1483 aaKnown RBP19.3■□□□□ 0.68
DENND3-208ENST00000518668 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
DENND3-208ENST00000518668 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
DENND3-208ENST00000518668 TNIKQ9UKE5 1360 aa19.26■□□□□ 0.67
DENND3-208ENST00000518668 NPM1P06748 294 aaKnown RBP eCLIP19.25■□□□□ 0.67
DENND3-208ENST00000518668 CEP164Q9UPV0 1460 aa19.25■□□□□ 0.67
DENND3-208ENST00000518668 KIF27Q86VH2 1401 aa19.23■□□□□ 0.67
DENND3-208ENST00000518668 TSPY4P0CV99 314 aa19.22■□□□□ 0.67
DENND3-208ENST00000518668 TSPY10P0CW01 314 aa19.22■□□□□ 0.67
DENND3-208ENST00000518668 ANP32AP39687 249 aaKnown RBP19.2■□□□□ 0.66
DENND3-208ENST00000518668 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
DENND3-208ENST00000518668 ESF1Q9H501 851 aaKnown RBP19.18■□□□□ 0.66
DENND3-208ENST00000518668 CHMP7Q8WUX9 453 aaPredicted RBP19.17■□□□□ 0.66
DENND3-208ENST00000518668 DDX10Q13206 875 aaKnown RBP19.16■□□□□ 0.66
DENND3-208ENST00000518668 CHIC2Q9UKJ5 165 aa19.13■□□□□ 0.65
DENND3-208ENST00000518668 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.65
DENND3-208ENST00000518668 FKBP8Q14318 412 aa19.08■□□□□ 0.65
DENND3-208ENST00000518668 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.64
DENND3-208ENST00000518668 CHGAP10645 457 aaKnown RBP19.06■□□□□ 0.64
DENND3-208ENST00000518668 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
DENND3-208ENST00000518668 EIF4G2P78344 907 aaKnown RBP eCLIP19.04■□□□□ 0.64
DENND3-208ENST00000518668 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.04■□□□□ 0.64
DENND3-208ENST00000518668 FAM9BQ8IZU0 186 aa19.03■□□□□ 0.64
DENND3-208ENST00000518668 PLEKHD1A6NEE1 506 aa19.02■□□□□ 0.63
DENND3-208ENST00000518668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19■□□□□ 0.63
DENND3-208ENST00000518668 SLC24A1O60721 1099 aa18.99■□□□□ 0.63
DENND3-208ENST00000518668 FHAD1B1AJZ9 1412 aa18.98■□□□□ 0.63
DENND3-208ENST00000518668 MRS2Q9HD23 443 aa18.97■□□□□ 0.63
DENND3-208ENST00000518668 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
DENND3-208ENST00000518668 WDR43Q15061 677 aaKnown RBP eCLIP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms