RNA–Protein interactions for RNA: ENST00000518444.5

LARP4-206, Transcript of La ribonucleoprotein domain family member 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LARP4, Length 2,853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-206ENST00000518444 NISCHQ9Y2I1 1504 aa26.07■■□□□ 1.76
LARP4-206ENST00000518444 CCDC180Q9P1Z9 1646 aa22.69■■□□□ 1.22
LARP4-206ENST00000518444 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
LARP4-206ENST00000518444 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
LARP4-206ENST00000518444 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
LARP4-206ENST00000518444 SHROOM4Q9ULL8 1493 aa21.31■■□□□ 1
LARP4-206ENST00000518444 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
LARP4-206ENST00000518444 ABCC9O60706 1549 aa21.21■□□□□ 0.99
LARP4-206ENST00000518444 NACADO15069 1562 aa21.07■□□□□ 0.96
LARP4-206ENST00000518444 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
LARP4-206ENST00000518444 RB1CC1Q8TDY2 1594 aa20.83■□□□□ 0.93
LARP4-206ENST00000518444 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
LARP4-206ENST00000518444 UNC13AQ9UPW8 1703 aa20.46■□□□□ 0.87
LARP4-206ENST00000518444 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
LARP4-206ENST00000518444 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
LARP4-206ENST00000518444 CECR2Q9BXF3 1484 aa20.22■□□□□ 0.83
LARP4-206ENST00000518444 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
LARP4-206ENST00000518444 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
LARP4-206ENST00000518444 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
LARP4-206ENST00000518444 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
LARP4-206ENST00000518444 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
LARP4-206ENST00000518444 WIZO95785 1651 aa19.99■□□□□ 0.79
LARP4-206ENST00000518444 TOP2AP11388 1531 aaKnown RBP19.8■□□□□ 0.76
LARP4-206ENST00000518444 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
LARP4-206ENST00000518444 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
LARP4-206ENST00000518444 ATAD2BQ9ULI0 1458 aa19.62■□□□□ 0.73
LARP4-206ENST00000518444 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.73
LARP4-206ENST00000518444 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.72
LARP4-206ENST00000518444 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
LARP4-206ENST00000518444 HMGXB3Q12766 1538 aa19.44■□□□□ 0.7
LARP4-206ENST00000518444 NCAPD3P42695 1498 aa19.43■□□□□ 0.7
LARP4-206ENST00000518444 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
LARP4-206ENST00000518444 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.68
LARP4-206ENST00000518444 CC2D2AQ9P2K1 1620 aa19.24■□□□□ 0.67
LARP4-206ENST00000518444 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
LARP4-206ENST00000518444 WRNQ14191 1432 aaPredicted RBP eCLIP19.07■□□□□ 0.64
LARP4-206ENST00000518444 CFTRP13569 1480 aa19.05■□□□□ 0.64
LARP4-206ENST00000518444 FAM9AQ8IZU1 332 aaPredicted RBP19.05■□□□□ 0.64
LARP4-206ENST00000518444 PRDM2Q13029 1718 aa19.02■□□□□ 0.64
LARP4-206ENST00000518444 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
LARP4-206ENST00000518444 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
LARP4-206ENST00000518444 BIVM-ERCC5R4GMW8 1640 aa18.93■□□□□ 0.62
LARP4-206ENST00000518444 EEA1Q15075 1411 aa18.93■□□□□ 0.62
LARP4-206ENST00000518444 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
LARP4-206ENST00000518444 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
LARP4-206ENST00000518444 SOGA1O94964 1423 aa18.88■□□□□ 0.61
LARP4-206ENST00000518444 CUX1P39880 1505 aa18.82■□□□□ 0.6
LARP4-206ENST00000518444 RUSC2Q8N2Y8 1516 aa18.81■□□□□ 0.6
LARP4-206ENST00000518444 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
LARP4-206ENST00000518444 HRCP23327 699 aa18.76■□□□□ 0.59
LARP4-206ENST00000518444 CSRNP3Q8WYN3 585 aa18.75■□□□□ 0.59
LARP4-206ENST00000518444 LAMC3Q9Y6N6 1575 aa18.75■□□□□ 0.59
LARP4-206ENST00000518444 EHMT2Q96KQ7 1210 aa18.74■□□□□ 0.59
LARP4-206ENST00000518444 FANCD2Q9BXW9 1451 aa18.72■□□□□ 0.59
LARP4-206ENST00000518444 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
LARP4-206ENST00000518444 NESP48681 1621 aa18.69■□□□□ 0.58
LARP4-206ENST00000518444 KIF21BO75037 1637 aa18.68■□□□□ 0.58
LARP4-206ENST00000518444 GOLGA3Q08378 1498 aa18.68■□□□□ 0.58
LARP4-206ENST00000518444 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.58
LARP4-206ENST00000518444 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
LARP4-206ENST00000518444 CEP162Q5TB80 1403 aa18.63■□□□□ 0.57
LARP4-206ENST00000518444 DNMBPQ6XZF7 1577 aa18.61■□□□□ 0.57
LARP4-206ENST00000518444 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.56
LARP4-206ENST00000518444 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
LARP4-206ENST00000518444 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
LARP4-206ENST00000518444 TOPBP1Q92547 1522 aa18.55■□□□□ 0.56
LARP4-206ENST00000518444 ERICH3Q5RHP9 1530 aa18.52■□□□□ 0.56
LARP4-206ENST00000518444 PRXQ9BXM0 1461 aa18.52■□□□□ 0.55
LARP4-206ENST00000518444 UBTFP17480 764 aaKnown RBP18.52■□□□□ 0.55
LARP4-206ENST00000518444 KIF21AQ7Z4S6 1674 aa18.51■□□□□ 0.55
LARP4-206ENST00000518444 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
LARP4-206ENST00000518444 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
LARP4-206ENST00000518444 CUX2O14529 1486 aa18.48■□□□□ 0.55
LARP4-206ENST00000518444 POLA1P09884 1462 aaPredicted RBP18.47■□□□□ 0.55
LARP4-206ENST00000518444 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
LARP4-206ENST00000518444 WDR97A6NE52 1622 aa18.4■□□□□ 0.54
LARP4-206ENST00000518444 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
LARP4-206ENST00000518444 IGF1RP08069 1367 aa18.39■□□□□ 0.53
LARP4-206ENST00000518444 CLIP1P30622 1438 aa18.38■□□□□ 0.53
LARP4-206ENST00000518444 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.53
LARP4-206ENST00000518444 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
LARP4-206ENST00000518444 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
LARP4-206ENST00000518444 VPS8Q8N3P4 1428 aa18.29■□□□□ 0.52
LARP4-206ENST00000518444 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
LARP4-206ENST00000518444 ABCA5Q8WWZ7 1642 aa18.29■□□□□ 0.52
LARP4-206ENST00000518444 TARBP1Q13395 1621 aaKnown RBP18.28■□□□□ 0.52
LARP4-206ENST00000518444 CUL7Q14999 1698 aa18.28■□□□□ 0.52
LARP4-206ENST00000518444 WDR62O43379 1518 aa18.25■□□□□ 0.51
LARP4-206ENST00000518444 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
LARP4-206ENST00000518444 TDRD9Q8NDG6 1382 aaKnown RBP18.18■□□□□ 0.5
LARP4-206ENST00000518444 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
LARP4-206ENST00000518444 ARAP1Q96P48 1450 aa18.17■□□□□ 0.5
LARP4-206ENST00000518444 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
LARP4-206ENST00000518444 IFT140Q96RY7 1462 aa18.14■□□□□ 0.49
LARP4-206ENST00000518444 PBRM1Q86U86 1689 aa18.13■□□□□ 0.49
LARP4-206ENST00000518444 ARHGAP35Q9NRY4 1499 aa18.12■□□□□ 0.49
LARP4-206ENST00000518444 CTTNBP2Q8WZ74 1663 aa18.11■□□□□ 0.49
LARP4-206ENST00000518444 RANGAP1P46060 587 aaPredicted RBP18.1■□□□□ 0.49
LARP4-206ENST00000518444 APLP2Q06481 763 aa18.09■□□□□ 0.49
LARP4-206ENST00000518444 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms