RNA–Protein interactions for RNA: ENST00000518325.1

PCDHGA7-201, Transcript of protocadherin gamma subfamily A, 7, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA7, Length 4,605 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7-201ENST00000518325 DCAF8L2P0C7V8 631 aa21.66■■□□□ 1.06
PCDHGA7-201ENST00000518325 NISCHQ9Y2I1 1504 aa21.22■□□□□ 0.99
PCDHGA7-201ENST00000518325 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
PCDHGA7-201ENST00000518325 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
PCDHGA7-201ENST00000518325 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
PCDHGA7-201ENST00000518325 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
PCDHGA7-201ENST00000518325 APLP2Q06481 763 aa19.17■□□□□ 0.66
PCDHGA7-201ENST00000518325 FAM9AQ8IZU1 332 aaPredicted RBP19.14■□□□□ 0.65
PCDHGA7-201ENST00000518325 MYT1Q01538 1121 aa19.01■□□□□ 0.63
PCDHGA7-201ENST00000518325 RANGAP1P46060 587 aaPredicted RBP18.77■□□□□ 0.6
PCDHGA7-201ENST00000518325 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
PCDHGA7-201ENST00000518325 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
PCDHGA7-201ENST00000518325 ATP1B4Q9UN42 357 aaPredicted RBP18.66■□□□□ 0.58
PCDHGA7-201ENST00000518325 UBTFP17480 764 aaKnown RBP18.53■□□□□ 0.56
PCDHGA7-201ENST00000518325 PCGF6Q9BYE7 350 aa18.45■□□□□ 0.54
PCDHGA7-201ENST00000518325 CENPBP07199 599 aaPredicted RBP18.32■□□□□ 0.52
PCDHGA7-201ENST00000518325 ABCC9O60706 1549 aa18.17■□□□□ 0.5
PCDHGA7-201ENST00000518325 HRCP23327 699 aa18.16■□□□□ 0.5
PCDHGA7-201ENST00000518325 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
PCDHGA7-201ENST00000518325 ZEB1P37275 1124 aaPredicted RBP18.15■□□□□ 0.5
PCDHGA7-201ENST00000518325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.14■□□□□ 0.49
PCDHGA7-201ENST00000518325 HNRNPUL2Q1KMD3 747 aaKnown RBP18.14■□□□□ 0.49
PCDHGA7-201ENST00000518325 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
PCDHGA7-201ENST00000518325 MYT1LQ9UL68 1186 aa18.11■□□□□ 0.49
PCDHGA7-201ENST00000518325 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
PCDHGA7-201ENST00000518325 PPARGC1BQ86YN6 1023 aaKnown RBP17.96■□□□□ 0.47
PCDHGA7-201ENST00000518325 ERICH6Q7L0X2 663 aa17.93■□□□□ 0.46
PCDHGA7-201ENST00000518325 ITGAEP38570 1179 aa17.87■□□□□ 0.45
PCDHGA7-201ENST00000518325 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
PCDHGA7-201ENST00000518325 LOC105371045A0A1W2PR82 267 aa17.67■□□□□ 0.42
PCDHGA7-201ENST00000518325 YTHDC1Q96MU7 727 aaKnown RBP17.67■□□□□ 0.42
PCDHGA7-201ENST00000518325 ZCCHC6Q5VYS8 1495 aaKnown RBP17.64■□□□□ 0.41
PCDHGA7-201ENST00000518325 POLR3GLQ9BT43 218 aa17.64■□□□□ 0.41
PCDHGA7-201ENST00000518325 FBLN2P98095 1184 aa17.63■□□□□ 0.41
PCDHGA7-201ENST00000518325 TRIM26Q12899 539 aaPredicted RBP17.62■□□□□ 0.41
PCDHGA7-201ENST00000518325 NEFLP07196 543 aa17.58■□□□□ 0.4
PCDHGA7-201ENST00000518325 FAM50AQ14320 339 aaKnown RBP17.45■□□□□ 0.38
PCDHGA7-201ENST00000518325 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
PCDHGA7-201ENST00000518325 CNGB1Q14028 1251 aaPredicted RBP17.41■□□□□ 0.38
PCDHGA7-201ENST00000518325 RB1CC1Q8TDY2 1594 aa17.41■□□□□ 0.38
PCDHGA7-201ENST00000518325 NACADO15069 1562 aa17.38■□□□□ 0.37
PCDHGA7-201ENST00000518325 TRIM52Q96A61 297 aa17.36■□□□□ 0.37
PCDHGA7-201ENST00000518325 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
PCDHGA7-201ENST00000518325 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
PCDHGA7-201ENST00000518325 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
PCDHGA7-201ENST00000518325 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
PCDHGA7-201ENST00000518325 P3H3Q8IVL6 736 aa17.23■□□□□ 0.35
PCDHGA7-201ENST00000518325 DIEXFQ68CQ4 756 aaKnown RBP17.18■□□□□ 0.34
PCDHGA7-201ENST00000518325 ACIN1Q9UKV3 1341 aaKnown RBP17.18■□□□□ 0.34
PCDHGA7-201ENST00000518325 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
PCDHGA7-201ENST00000518325 NEUROD1Q13562 356 aa17.14■□□□□ 0.33
PCDHGA7-201ENST00000518325 ZNF326Q5BKZ1 582 aaKnown RBP17.14■□□□□ 0.33
PCDHGA7-201ENST00000518325 CDK11AQ9UQ88 783 aaPredicted RBP17.12■□□□□ 0.33
PCDHGA7-201ENST00000518325 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCDHGA7-201ENST00000518325 BCANQ96GW7 911 aa17.1■□□□□ 0.33
PCDHGA7-201ENST00000518325 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
PCDHGA7-201ENST00000518325 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
PCDHGA7-201ENST00000518325 ESF1Q9H501 851 aaKnown RBP17.06■□□□□ 0.32
PCDHGA7-201ENST00000518325 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
PCDHGA7-201ENST00000518325 SCAF1Q9H7N4 1312 aaKnown RBP17.02■□□□□ 0.32
PCDHGA7-201ENST00000518325 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
PCDHGA7-201ENST00000518325 CHMP7Q8WUX9 453 aaPredicted RBP16.89■□□□□ 0.29
PCDHGA7-201ENST00000518325 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
PCDHGA7-201ENST00000518325 CLSPNQ9HAW4 1339 aa16.88■□□□□ 0.29
PCDHGA7-201ENST00000518325 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
PCDHGA7-201ENST00000518325 SLC24A1O60721 1099 aa16.84■□□□□ 0.29
PCDHGA7-201ENST00000518325 CHGAP10645 457 aaKnown RBP16.84■□□□□ 0.29
PCDHGA7-201ENST00000518325 NEFMP07197 916 aa16.81■□□□□ 0.28
PCDHGA7-201ENST00000518325 ANP32CO43423 234 aa16.79■□□□□ 0.28
PCDHGA7-201ENST00000518325 ZBTB47Q9UFB7 747 aaPredicted RBP16.72■□□□□ 0.27
PCDHGA7-201ENST00000518325 TSPY4P0CV99 314 aa16.71■□□□□ 0.27
PCDHGA7-201ENST00000518325 TSPY10P0CW01 314 aa16.71■□□□□ 0.27
PCDHGA7-201ENST00000518325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.68■□□□□ 0.26
PCDHGA7-201ENST00000518325 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
PCDHGA7-201ENST00000518325 CHIC2Q9UKJ5 165 aa16.66■□□□□ 0.26
PCDHGA7-201ENST00000518325 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
PCDHGA7-201ENST00000518325 ZNF316A6NFI3 1004 aaPredicted RBP16.63■□□□□ 0.25
PCDHGA7-201ENST00000518325 MTUS2Q5JR59 1369 aa16.63■□□□□ 0.25
PCDHGA7-201ENST00000518325 CANXP27824 592 aaKnown RBP16.62■□□□□ 0.25
PCDHGA7-201ENST00000518325 KCNH8Q96L42 1107 aa16.61■□□□□ 0.25
PCDHGA7-201ENST00000518325 TONSLQ96HA7 1378 aa16.6■□□□□ 0.25
PCDHGA7-201ENST00000518325 BCL11AQ9H165 835 aa16.58■□□□□ 0.25
PCDHGA7-201ENST00000518325 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
PCDHGA7-201ENST00000518325 PLEKHD1A6NEE1 506 aa16.56■□□□□ 0.24
PCDHGA7-201ENST00000518325 EIF5BO60841 1220 aaKnown RBP16.55■□□□□ 0.24
PCDHGA7-201ENST00000518325 ANP32EQ9BTT0 268 aa16.55■□□□□ 0.24
PCDHGA7-201ENST00000518325 ERCC6Q03468 1493 aa16.55■□□□□ 0.24
PCDHGA7-201ENST00000518325 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
PCDHGA7-201ENST00000518325 CLIP1P30622 1438 aa16.46■□□□□ 0.23
PCDHGA7-201ENST00000518325 KDM2AQ9Y2K7 1162 aa16.45■□□□□ 0.22
PCDHGA7-201ENST00000518325 ARID4BQ4LE39 1312 aaPredicted RBP16.45■□□□□ 0.22
PCDHGA7-201ENST00000518325 PPP1R15AO75807 674 aaPredicted RBP16.44■□□□□ 0.22
PCDHGA7-201ENST00000518325 WRNQ14191 1432 aaPredicted RBP eCLIP16.43■□□□□ 0.22
PCDHGA7-201ENST00000518325 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
PCDHGA7-201ENST00000518325 GLIPR1L2Q4G1C9 344 aa16.4■□□□□ 0.22
PCDHGA7-201ENST00000518325 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
PCDHGA7-201ENST00000518325 RRP7BPQ9NSQ0 103 aa16.38■□□□□ 0.21
PCDHGA7-201ENST00000518325 EEA1Q15075 1411 aa16.38■□□□□ 0.21
PCDHGA7-201ENST00000518325 C14orf37Q86TY3 774 aa16.38■□□□□ 0.21
PCDHGA7-201ENST00000518325 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms