RNA–Protein interactions for RNA: ENST00000517396.5

LYRM2-202, Transcript of LYR motif containing 2, humanhuman

TSL 2

Gene LYRM2, Length 2,835 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM2-202ENST00000517396 NISCHQ9Y2I1 1504 aa15.92■□□□□ 0.14
LYRM2-202ENST00000517396 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
LYRM2-202ENST00000517396 SHROOM4Q9ULL8 1493 aa13.68□□□□□ -0.22
LYRM2-202ENST00000517396 DCAF1Q9Y4B6 1507 aa13.53□□□□□ -0.24
LYRM2-202ENST00000517396 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
LYRM2-202ENST00000517396 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
LYRM2-202ENST00000517396 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
LYRM2-202ENST00000517396 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
LYRM2-202ENST00000517396 NACADO15069 1562 aa13.04□□□□□ -0.32
LYRM2-202ENST00000517396 CHIC1Q5VXU3 224 aa13.03□□□□□ -0.32
LYRM2-202ENST00000517396 PCGF6Q9BYE7 350 aa12.86□□□□□ -0.35
LYRM2-202ENST00000517396 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
LYRM2-202ENST00000517396 HRCP23327 699 aa12.8□□□□□ -0.36
LYRM2-202ENST00000517396 LOC105371045A0A1W2PR82 267 aa12.8□□□□□ -0.36
LYRM2-202ENST00000517396 PPARGC1BQ86YN6 1023 aaKnown RBP12.72□□□□□ -0.37
LYRM2-202ENST00000517396 ABCC9O60706 1549 aa12.66□□□□□ -0.38
LYRM2-202ENST00000517396 UNC13AQ9UPW8 1703 aa12.54□□□□□ -0.4
LYRM2-202ENST00000517396 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
LYRM2-202ENST00000517396 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
LYRM2-202ENST00000517396 FAM9AQ8IZU1 332 aaPredicted RBP12.51□□□□□ -0.41
LYRM2-202ENST00000517396 TRIM26Q12899 539 aaPredicted RBP12.43□□□□□ -0.42
LYRM2-202ENST00000517396 TRIM41Q8WV44 630 aa12.43□□□□□ -0.42
LYRM2-202ENST00000517396 RSF1Q96T23 1441 aaPredicted RBP12.42□□□□□ -0.42
LYRM2-202ENST00000517396 BICRAQ9NZM4 1560 aa12.37□□□□□ -0.43
LYRM2-202ENST00000517396 PEG3Q9GZU2 1588 aa12.34□□□□□ -0.43
LYRM2-202ENST00000517396 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
LYRM2-202ENST00000517396 CECR2Q9BXF3 1484 aa12.25□□□□□ -0.45
LYRM2-202ENST00000517396 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
LYRM2-202ENST00000517396 MROH2BQ7Z745 1585 aa12.17□□□□□ -0.46
LYRM2-202ENST00000517396 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
LYRM2-202ENST00000517396 SMARCA2P51531 1590 aa12.15□□□□□ -0.46
LYRM2-202ENST00000517396 TTBK1Q5TCY1 1321 aaPredicted RBP12.12□□□□□ -0.47
LYRM2-202ENST00000517396 ZEB1P37275 1124 aaPredicted RBP12.11□□□□□ -0.47
LYRM2-202ENST00000517396 WIZO95785 1651 aa12.1□□□□□ -0.47
LYRM2-202ENST00000517396 EIF4G1Q04637 1599 aaKnown RBP12.09□□□□□ -0.47
LYRM2-202ENST00000517396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
LYRM2-202ENST00000517396 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
LYRM2-202ENST00000517396 CCER1Q8TC90 406 aaPredicted RBP11.99□□□□□ -0.49
LYRM2-202ENST00000517396 SCAF1Q9H7N4 1312 aaKnown RBP11.95□□□□□ -0.5
LYRM2-202ENST00000517396 ABCC8Q09428 1581 aa11.94□□□□□ -0.5
LYRM2-202ENST00000517396 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
LYRM2-202ENST00000517396 ATAD2BQ9ULI0 1458 aa11.93□□□□□ -0.5
LYRM2-202ENST00000517396 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
LYRM2-202ENST00000517396 PRDM2Q13029 1718 aa11.9□□□□□ -0.51
LYRM2-202ENST00000517396 PABPN1Q86U42 306 aaKnown RBP eCLIP11.88□□□□□ -0.51
LYRM2-202ENST00000517396 SOGA1O94964 1423 aa11.88□□□□□ -0.51
LYRM2-202ENST00000517396 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
LYRM2-202ENST00000517396 RUSC2Q8N2Y8 1516 aa11.84□□□□□ -0.51
LYRM2-202ENST00000517396 CEP162Q5TB80 1403 aa11.82□□□□□ -0.52
LYRM2-202ENST00000517396 BAZ1BQ9UIG0 1483 aaKnown RBP11.81□□□□□ -0.52
LYRM2-202ENST00000517396 CSRNP3Q8WYN3 585 aa11.8□□□□□ -0.52
LYRM2-202ENST00000517396 NEUROD1Q13562 356 aa11.79□□□□□ -0.52
LYRM2-202ENST00000517396 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
LYRM2-202ENST00000517396 RANGAP1P46060 587 aaPredicted RBP11.78□□□□□ -0.52
LYRM2-202ENST00000517396 ACIN1Q9UKV3 1341 aaKnown RBP11.73□□□□□ -0.53
LYRM2-202ENST00000517396 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
LYRM2-202ENST00000517396 TNIKQ9UKE5 1360 aa11.73□□□□□ -0.53
LYRM2-202ENST00000517396 AEBP2Q6ZN18 517 aaPredicted RBP11.72□□□□□ -0.53
LYRM2-202ENST00000517396 WRNQ14191 1432 aaPredicted RBP eCLIP11.71□□□□□ -0.53
LYRM2-202ENST00000517396 BIVM-ERCC5R4GMW8 1640 aa11.7□□□□□ -0.54
LYRM2-202ENST00000517396 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
LYRM2-202ENST00000517396 CC2D2AQ9P2K1 1620 aa11.68□□□□□ -0.54
LYRM2-202ENST00000517396 YTHDC1Q96MU7 727 aaKnown RBP11.66□□□□□ -0.54
LYRM2-202ENST00000517396 EEA1Q15075 1411 aa11.65□□□□□ -0.55
LYRM2-202ENST00000517396 CFTRP13569 1480 aa11.64□□□□□ -0.55
LYRM2-202ENST00000517396 GOLGA3Q08378 1498 aa11.63□□□□□ -0.55
LYRM2-202ENST00000517396 ZNF316A6NFI3 1004 aaPredicted RBP11.62□□□□□ -0.55
LYRM2-202ENST00000517396 TOP2BQ02880 1626 aa11.61□□□□□ -0.55
LYRM2-202ENST00000517396 CENPBP07199 599 aaPredicted RBP11.6□□□□□ -0.55
LYRM2-202ENST00000517396 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
LYRM2-202ENST00000517396 SYNJ1O43426 1573 aa11.58□□□□□ -0.56
LYRM2-202ENST00000517396 LAMC3Q9Y6N6 1575 aa11.57□□□□□ -0.56
LYRM2-202ENST00000517396 CLIP1P30622 1438 aa11.57□□□□□ -0.56
LYRM2-202ENST00000517396 APLP2Q06481 763 aa11.57□□□□□ -0.56
LYRM2-202ENST00000517396 MIER1Q8N108 512 aa11.56□□□□□ -0.56
LYRM2-202ENST00000517396 RAPGEF2Q9Y4G8 1499 aa11.54□□□□□ -0.56
LYRM2-202ENST00000517396 CEP164Q9UPV0 1460 aa11.54□□□□□ -0.56
LYRM2-202ENST00000517396 KIF21BO75037 1637 aa11.5□□□□□ -0.57
LYRM2-202ENST00000517396 VPS8Q8N3P4 1428 aa11.48□□□□□ -0.57
LYRM2-202ENST00000517396 WDR97A6NE52 1622 aa11.48□□□□□ -0.57
LYRM2-202ENST00000517396 CADPSQ9ULU8 1353 aa11.46□□□□□ -0.57
LYRM2-202ENST00000517396 KANK4Q5T7N3 995 aaPredicted RBP11.46□□□□□ -0.58
LYRM2-202ENST00000517396 ITGAEP38570 1179 aa11.43□□□□□ -0.58
LYRM2-202ENST00000517396 DNMBPQ6XZF7 1577 aa11.42□□□□□ -0.58
LYRM2-202ENST00000517396 ERICH3Q5RHP9 1530 aa11.42□□□□□ -0.58
LYRM2-202ENST00000517396 SLC24A1O60721 1099 aa11.41□□□□□ -0.58
LYRM2-202ENST00000517396 CUX1P39880 1505 aa11.41□□□□□ -0.58
LYRM2-202ENST00000517396 DHX57Q6P158 1386 aaKnown RBP11.35□□□□□ -0.59
LYRM2-202ENST00000517396 ARAP1Q96P48 1450 aa11.33□□□□□ -0.6
LYRM2-202ENST00000517396 PRXQ9BXM0 1461 aa11.31□□□□□ -0.6
LYRM2-202ENST00000517396 FANCD2Q9BXW9 1451 aa11.31□□□□□ -0.6
LYRM2-202ENST00000517396 CUL7Q14999 1698 aa11.3□□□□□ -0.6
LYRM2-202ENST00000517396 ABCA10Q8WWZ4 1543 aa11.29□□□□□ -0.6
LYRM2-202ENST00000517396 PDS5BQ9NTI5 1447 aa11.29□□□□□ -0.6
LYRM2-202ENST00000517396 P3H3Q8IVL6 736 aa11.27□□□□□ -0.61
LYRM2-202ENST00000517396 ATP1B4Q9UN42 357 aaPredicted RBP11.27□□□□□ -0.61
LYRM2-202ENST00000517396 ABCA5Q8WWZ7 1642 aa11.26□□□□□ -0.61
LYRM2-202ENST00000517396 TOPBP1Q92547 1522 aa11.26□□□□□ -0.61
LYRM2-202ENST00000517396 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
LYRM2-202ENST00000517396 KCNH8Q96L42 1107 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms