RNA–Protein interactions for RNA: ENST00000516454.1

RNU6-659P-201, Transcript of RNA, U6 small nuclear 659, pseudogene, humanhuman

BASIC

Gene RNU6-659P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-659P-201ENST00000516454 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
RNU6-659P-201ENST00000516454 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
RNU6-659P-201ENST00000516454 SENP3Q9H4L4 574 aaPredicted RBP13.7□□□□□ -0.22
RNU6-659P-201ENST00000516454 PHF23Q9BUL5 403 aaPredicted RBP13.48□□□□□ -0.25
RNU6-659P-201ENST00000516454 FOXD1Q16676 465 aa12.85□□□□□ -0.35
RNU6-659P-201ENST00000516454 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
RNU6-659P-201ENST00000516454 MSH5O43196 834 aa12.21□□□□□ -0.45
RNU6-659P-201ENST00000516454 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
RNU6-659P-201ENST00000516454 PPP6R1Q9UPN7 881 aa11.63□□□□□ -0.55
RNU6-659P-201ENST00000516454 ADRA2BP18089 450 aa11.58□□□□□ -0.56
RNU6-659P-201ENST00000516454 PLPPR3Q6T4P5 718 aa11.48□□□□□ -0.57
RNU6-659P-201ENST00000516454 CACNB1Q02641 598 aaPredicted RBP10.85□□□□□ -0.67
RNU6-659P-201ENST00000516454 MAPK8IP2Q13387 824 aaPredicted RBP10.81□□□□□ -0.68
RNU6-659P-201ENST00000516454 DMRT2Q9Y5R5 561 aa10.77□□□□□ -0.69
RNU6-659P-201ENST00000516454 SCAF1Q9H7N4 1312 aaKnown RBP10.57□□□□□ -0.72
RNU6-659P-201ENST00000516454 DCAF8L1A6NGE4 600 aa10.46□□□□□ -0.73
RNU6-659P-201ENST00000516454 RNF39Q9H2S5 420 aa10.37□□□□□ -0.75
RNU6-659P-201ENST00000516454 C1QBPQ07021 282 aaKnown RBP10.18□□□□□ -0.78
RNU6-659P-201ENST00000516454 HOXD11P31277 338 aaPredicted RBP10.16□□□□□ -0.78
RNU6-659P-201ENST00000516454 PPP4R3CPQ6ZMV5 832 aa10.01□□□□□ -0.81
RNU6-659P-201ENST00000516454 POTEHQ6S545 545 aa9.96□□□□□ -0.82
RNU6-659P-201ENST00000516454 RNF216Q9NWF9 866 aaPredicted RBP9.96□□□□□ -0.82
RNU6-659P-201ENST00000516454 CNKSR2Q8WXI2 1034 aa9.93□□□□□ -0.82
RNU6-659P-201ENST00000516454 DNAJC5BQ9UF47 199 aa9.86□□□□□ -0.83
RNU6-659P-201ENST00000516454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.75□□□□□ -0.85
RNU6-659P-201ENST00000516454 DSG3P32926 999 aa9.55□□□□□ -0.88
RNU6-659P-201ENST00000516454 CAPN15O75808 1086 aa9.53□□□□□ -0.88
RNU6-659P-201ENST00000516454 SPINK5Q9NQ38 1064 aaPredicted RBP9.5□□□□□ -0.89
RNU6-659P-201ENST00000516454 NCBP3Q53F19 620 aaKnown RBP9.46□□□□□ -0.9
RNU6-659P-201ENST00000516454 U3KPZ7 1027 aaPredicted RBP9.45□□□□□ -0.9
RNU6-659P-201ENST00000516454 NPM3O75607 178 aaKnown RBP9.32□□□□□ -0.92
RNU6-659P-201ENST00000516454 ABCB7O75027 752 aa9.27□□□□□ -0.93
RNU6-659P-201ENST00000516454 TRHP20396 242 aaPredicted RBP9.26□□□□□ -0.93
RNU6-659P-201ENST00000516454 ZNF219Q9P2Y4 722 aaPredicted RBP9.16□□□□□ -0.94
RNU6-659P-201ENST00000516454 CHRDL2Q6WN34 429 aa9.14□□□□□ -0.95
RNU6-659P-201ENST00000516454 APLP2Q06481 763 aa9.11□□□□□ -0.95
RNU6-659P-201ENST00000516454 RBM42Q9BTD8 480 aaKnown RBP9.1□□□□□ -0.95
RNU6-659P-201ENST00000516454 SP7Q8TDD2 431 aaPredicted RBP9.08□□□□□ -0.96
RNU6-659P-201ENST00000516454 SLC4A2P04920 1241 aa9.04□□□□□ -0.96
RNU6-659P-201ENST00000516454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.99□□□□□ -0.97
RNU6-659P-201ENST00000516454 HNRNPUL2Q1KMD3 747 aaKnown RBP8.99□□□□□ -0.97
RNU6-659P-201ENST00000516454 SAMD1Q6SPF0 538 aaPredicted RBP8.91□□□□□ -0.98
RNU6-659P-201ENST00000516454 POLA2Q14181 598 aa8.87□□□□□ -0.99
RNU6-659P-201ENST00000516454 HAX1O00165 279 aa8.84□□□□□ -0.99
RNU6-659P-201ENST00000516454 PIP4P2Q8N4L2 257 aa8.82□□□□□ -1
RNU6-659P-201ENST00000516454 AKT1S1Q96B36 256 aa8.79□□□□□ -1
RNU6-659P-201ENST00000516454 REM2Q8IYK8 340 aaPredicted RBP8.73□□□□□ -1.01
RNU6-659P-201ENST00000516454 KCNA4P22459 653 aa8.7□□□□□ -1.02
RNU6-659P-201ENST00000516454 EVX2Q03828 476 aa8.67□□□□□ -1.02
RNU6-659P-201ENST00000516454 PITPNM1O00562 1244 aa8.65□□□□□ -1.02
RNU6-659P-201ENST00000516454 FXR2P51116 673 aaKnown RBP eCLIP8.65□□□□□ -1.02
RNU6-659P-201ENST00000516454 MYCNP04198 464 aaPredicted RBP8.62□□□□□ -1.03
RNU6-659P-201ENST00000516454 OSCARQ8IYS5 282 aa8.61□□□□□ -1.03
RNU6-659P-201ENST00000516454 ZBTB12Q9Y330 459 aaPredicted RBP8.59□□□□□ -1.03
RNU6-659P-201ENST00000516454 LHX8Q68G74 356 aa8.52□□□□□ -1.05
RNU6-659P-201ENST00000516454 ATF5Q9Y2D1 282 aaPredicted RBP8.51□□□□□ -1.05
RNU6-659P-201ENST00000516454 PLSCR2Q9NRY7 297 aa8.48□□□□□ -1.05
RNU6-659P-201ENST00000516454 PRKAR2AP13861 404 aaKnown RBP8.44□□□□□ -1.06
RNU6-659P-201ENST00000516454 GABBR2O75899 941 aa8.43□□□□□ -1.06
RNU6-659P-201ENST00000516454 C19orf67A6NJJ6 358 aa8.4□□□□□ -1.06
RNU6-659P-201ENST00000516454 CLEC11AQ9Y240 323 aa8.37□□□□□ -1.07
RNU6-659P-201ENST00000516454 SPDYE2BA6NHP3 402 aa8.29□□□□□ -1.08
RNU6-659P-201ENST00000516454 SPDYE6P0CI01 402 aa8.29□□□□□ -1.08
RNU6-659P-201ENST00000516454 SPDYE2Q495Y8 402 aa8.29□□□□□ -1.08
RNU6-659P-201ENST00000516454 SPDYE1Q8NFV5 336 aaPredicted RBP8.29□□□□□ -1.08
RNU6-659P-201ENST00000516454 FOXD4L1Q9NU39 408 aa8.26□□□□□ -1.09
RNU6-659P-201ENST00000516454 CHADLQ6NUI6 762 aa8.25□□□□□ -1.09
RNU6-659P-201ENST00000516454 POTEIP0CG38 1075 aa8.24□□□□□ -1.09
RNU6-659P-201ENST00000516454 FBLN2P98095 1184 aa8.2□□□□□ -1.1
RNU6-659P-201ENST00000516454 ZNF692Q9BU19 519 aaPredicted RBP8.16□□□□□ -1.1
RNU6-659P-201ENST00000516454 PRR29P0C7W0 189 aa8.13□□□□□ -1.11
RNU6-659P-201ENST00000516454 CD44P16070 742 aaKnown RBP8.13□□□□□ -1.11
RNU6-659P-201ENST00000516454 DCBLD2Q96PD2 775 aa8.12□□□□□ -1.11
RNU6-659P-201ENST00000516454 SLC4A1APQ9BWU0 796 aaKnown RBP8.11□□□□□ -1.11
RNU6-659P-201ENST00000516454 SSUH2Q9Y2M2 353 aa8.11□□□□□ -1.11
RNU6-659P-201ENST00000516454 POTEMA6NI47 508 aa8.07□□□□□ -1.12
RNU6-659P-201ENST00000516454 MKRN4PQ13434 485 aaPredicted RBP8.06□□□□□ -1.12
RNU6-659P-201ENST00000516454 CLCN6P51797 869 aa8.05□□□□□ -1.12
RNU6-659P-201ENST00000516454 OTUD5Q96G74 571 aa8.04□□□□□ -1.12
RNU6-659P-201ENST00000516454 FARP1Q9Y4F1 1045 aaPredicted RBP8.04□□□□□ -1.12
RNU6-659P-201ENST00000516454 ATXN8OSP0DMR3 200 aa8.02□□□□□ -1.13
RNU6-659P-201ENST00000516454 POTEGQ6S5H5 508 aa8.02□□□□□ -1.13
RNU6-659P-201ENST00000516454 PABPN1Q86U42 306 aaKnown RBP eCLIP8.02□□□□□ -1.13
RNU6-659P-201ENST00000516454 ZBTB22O15209 634 aa7.98□□□□□ -1.13
RNU6-659P-201ENST00000516454 POTEB2H3BUK9 544 aa7.97□□□□□ -1.13
RNU6-659P-201ENST00000516454 ZRANB1Q9UGI0 708 aa7.95□□□□□ -1.14
RNU6-659P-201ENST00000516454 ZNF579Q8NAF0 562 aaKnown RBP7.94□□□□□ -1.14
RNU6-659P-201ENST00000516454 GALR2O43603 387 aaPredicted RBP7.93□□□□□ -1.14
RNU6-659P-201ENST00000516454 PCDH10Q9P2E7 1040 aa7.9□□□□□ -1.14
RNU6-659P-201ENST00000516454 PELP1Q8IZL8 1130 aaKnown RBP7.82□□□□□ -1.16
RNU6-659P-201ENST00000516454 PHF12Q96QT6 1004 aa7.8□□□□□ -1.16
RNU6-659P-201ENST00000516454 FAM163AQ96GL9 167 aaPredicted RBP7.79□□□□□ -1.16
RNU6-659P-201ENST00000516454 CREBZFQ9NS37 354 aa7.77□□□□□ -1.17
RNU6-659P-201ENST00000516454 PAK3O75914 559 aaPredicted RBP7.76□□□□□ -1.17
RNU6-659P-201ENST00000516454 POTEJP0CG39 1038 aa7.76□□□□□ -1.17
RNU6-659P-201ENST00000516454 LCE2DQ5TA82 110 aaPredicted RBP7.76□□□□□ -1.17
RNU6-659P-201ENST00000516454 METRNQ9UJH8 293 aa7.76□□□□□ -1.17
RNU6-659P-201ENST00000516454 MAMSTRQ6ZN01 415 aa7.73□□□□□ -1.17
RNU6-659P-201ENST00000516454 C7P10643 843 aa7.7□□□□□ -1.18
RNU6-659P-201ENST00000516454 SLC39A7Q92504 469 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms