RNA–Protein interactions for RNA: ENST00000516381.1

SCARNA17.3-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 125 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.3-201ENST00000516381 AEBP2Q6ZN18 517 aaPredicted RBP5.47□□□□□ -1.53
SCARNA17.3-201ENST00000516381 CHIC1Q5VXU3 224 aa5.06□□□□□ -1.6
SCARNA17.3-201ENST00000516381 SENP3Q9H4L4 574 aaPredicted RBP4.68□□□□□ -1.66
SCARNA17.3-201ENST00000516381 POTEDQ86YR6 584 aa4.65□□□□□ -1.67
SCARNA17.3-201ENST00000516381 PHF23Q9BUL5 403 aaPredicted RBP4.59□□□□□ -1.67
SCARNA17.3-201ENST00000516381 FOXD1Q16676 465 aa4.42□□□□□ -1.7
SCARNA17.3-201ENST00000516381 MSH5O43196 834 aa4.22□□□□□ -1.73
SCARNA17.3-201ENST00000516381 PIAS4Q8N2W9 510 aaPredicted RBP4.05□□□□□ -1.76
SCARNA17.3-201ENST00000516381 PPP6R1Q9UPN7 881 aa3.92□□□□□ -1.78
SCARNA17.3-201ENST00000516381 ADRA2BP18089 450 aa3.88□□□□□ -1.79
SCARNA17.3-201ENST00000516381 CACNB1Q02641 598 aaPredicted RBP3.82□□□□□ -1.8
SCARNA17.3-201ENST00000516381 PLPPR3Q6T4P5 718 aa3.75□□□□□ -1.81
SCARNA17.3-201ENST00000516381 MAPK8IP2Q13387 824 aaPredicted RBP3.66□□□□□ -1.82
SCARNA17.3-201ENST00000516381 DMRT2Q9Y5R5 561 aa3.66□□□□□ -1.82
SCARNA17.3-201ENST00000516381 RNF39Q9H2S5 420 aa3.59□□□□□ -1.83
SCARNA17.3-201ENST00000516381 POTEHQ6S545 545 aa3.57□□□□□ -1.84
SCARNA17.3-201ENST00000516381 DCAF8L1A6NGE4 600 aa3.54□□□□□ -1.84
SCARNA17.3-201ENST00000516381 SCAF1Q9H7N4 1312 aaKnown RBP3.5□□□□□ -1.85
SCARNA17.3-201ENST00000516381 C1QBPQ07021 282 aaKnown RBP3.5□□□□□ -1.85
SCARNA17.3-201ENST00000516381 HOXD11P31277 338 aaPredicted RBP3.41□□□□□ -1.86
SCARNA17.3-201ENST00000516381 DNAJC5BQ9UF47 199 aa3.33□□□□□ -1.88
SCARNA17.3-201ENST00000516381 RNF216Q9NWF9 866 aaPredicted RBP3.31□□□□□ -1.88
SCARNA17.3-201ENST00000516381 DSG3P32926 999 aa3.26□□□□□ -1.89
SCARNA17.3-201ENST00000516381 PPP4R3CPQ6ZMV5 832 aa3.26□□□□□ -1.89
SCARNA17.3-201ENST00000516381 CNKSR2Q8WXI2 1034 aa3.26□□□□□ -1.89
SCARNA17.3-201ENST00000516381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.25□□□□□ -1.89
SCARNA17.3-201ENST00000516381 SPINK5Q9NQ38 1064 aaPredicted RBP3.22□□□□□ -1.89
SCARNA17.3-201ENST00000516381 CAPN15O75808 1086 aa3.21□□□□□ -1.9
SCARNA17.3-201ENST00000516381 SP7Q8TDD2 431 aaPredicted RBP3.21□□□□□ -1.9
SCARNA17.3-201ENST00000516381 CHRDL2Q6WN34 429 aa3.17□□□□□ -1.9
SCARNA17.3-201ENST00000516381 U3KPZ7 1027 aaPredicted RBP3.16□□□□□ -1.9
SCARNA17.3-201ENST00000516381 ABCB7O75027 752 aa3.12□□□□□ -1.91
SCARNA17.3-201ENST00000516381 RBM42Q9BTD8 480 aaKnown RBP3.1□□□□□ -1.91
SCARNA17.3-201ENST00000516381 TRHP20396 242 aaPredicted RBP3.09□□□□□ -1.91
SCARNA17.3-201ENST00000516381 PLSCR2Q9NRY7 297 aa3.08□□□□□ -1.92
SCARNA17.3-201ENST00000516381 HAX1O00165 279 aa3.06□□□□□ -1.92
SCARNA17.3-201ENST00000516381 ZNF219Q9P2Y4 722 aaPredicted RBP3.05□□□□□ -1.92
SCARNA17.3-201ENST00000516381 PIP4P2Q8N4L2 257 aa3.03□□□□□ -1.92
SCARNA17.3-201ENST00000516381 EVX2Q03828 476 aa3.02□□□□□ -1.93
SCARNA17.3-201ENST00000516381 NCBP3Q53F19 620 aaKnown RBP3.02□□□□□ -1.93
SCARNA17.3-201ENST00000516381 NPM3O75607 178 aaKnown RBP3.01□□□□□ -1.93
SCARNA17.3-201ENST00000516381 LHX8Q68G74 356 aa3.01□□□□□ -1.93
SCARNA17.3-201ENST00000516381 APLP2Q06481 763 aa2.99□□□□□ -1.93
SCARNA17.3-201ENST00000516381 AKT1S1Q96B36 256 aa2.97□□□□□ -1.93
SCARNA17.3-201ENST00000516381 SLC4A2P04920 1241 aa2.96□□□□□ -1.94
SCARNA17.3-201ENST00000516381 FXR2P51116 673 aaKnown RBP eCLIP2.96□□□□□ -1.94
SCARNA17.3-201ENST00000516381 REM2Q8IYK8 340 aaPredicted RBP2.96□□□□□ -1.94
SCARNA17.3-201ENST00000516381 POLA2Q14181 598 aa2.94□□□□□ -1.94
SCARNA17.3-201ENST00000516381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.93□□□□□ -1.94
SCARNA17.3-201ENST00000516381 PITPNM1O00562 1244 aa2.93□□□□□ -1.94
SCARNA17.3-201ENST00000516381 HNRNPUL2Q1KMD3 747 aaKnown RBP2.93□□□□□ -1.94
SCARNA17.3-201ENST00000516381 GABBR2O75899 941 aa2.91□□□□□ -1.94
SCARNA17.3-201ENST00000516381 SAMD1Q6SPF0 538 aaPredicted RBP2.91□□□□□ -1.94
SCARNA17.3-201ENST00000516381 C19orf67A6NJJ6 358 aa2.87□□□□□ -1.95
SCARNA17.3-201ENST00000516381 OSCARQ8IYS5 282 aa2.87□□□□□ -1.95
SCARNA17.3-201ENST00000516381 POTEMA6NI47 508 aa2.86□□□□□ -1.95
SCARNA17.3-201ENST00000516381 POTEIP0CG38 1075 aa2.86□□□□□ -1.95
SCARNA17.3-201ENST00000516381 PRKAR2AP13861 404 aaKnown RBP2.85□□□□□ -1.95
SCARNA17.3-201ENST00000516381 POTEGQ6S5H5 508 aa2.83□□□□□ -1.96
SCARNA17.3-201ENST00000516381 ZBTB12Q9Y330 459 aaPredicted RBP2.82□□□□□ -1.96
SCARNA17.3-201ENST00000516381 OTUD5Q96G74 571 aa2.81□□□□□ -1.96
SCARNA17.3-201ENST00000516381 PCDH10Q9P2E7 1040 aa2.79□□□□□ -1.96
SCARNA17.3-201ENST00000516381 CLEC11AQ9Y240 323 aa2.78□□□□□ -1.96
SCARNA17.3-201ENST00000516381 POTEB2H3BUK9 544 aa2.77□□□□□ -1.97
SCARNA17.3-201ENST00000516381 MYCNP04198 464 aaPredicted RBP2.77□□□□□ -1.97
SCARNA17.3-201ENST00000516381 CHADLQ6NUI6 762 aa2.77□□□□□ -1.97
SCARNA17.3-201ENST00000516381 ATF5Q9Y2D1 282 aaPredicted RBP2.77□□□□□ -1.97
SCARNA17.3-201ENST00000516381 DCBLD2Q96PD2 775 aa2.76□□□□□ -1.97
SCARNA17.3-201ENST00000516381 SPDYE1Q8NFV5 336 aaPredicted RBP2.75□□□□□ -1.97
SCARNA17.3-201ENST00000516381 CD44P16070 742 aaKnown RBP2.74□□□□□ -1.97
SCARNA17.3-201ENST00000516381 SPDYE2BA6NHP3 402 aa2.73□□□□□ -1.97
SCARNA17.3-201ENST00000516381 SPDYE6P0CI01 402 aa2.73□□□□□ -1.97
SCARNA17.3-201ENST00000516381 SPDYE2Q495Y8 402 aa2.73□□□□□ -1.97
SCARNA17.3-201ENST00000516381 LCE2DQ5TA82 110 aaPredicted RBP2.73□□□□□ -1.97
SCARNA17.3-201ENST00000516381 CLCN6P51797 869 aa2.72□□□□□ -1.97
SCARNA17.3-201ENST00000516381 KCNA4P22459 653 aa2.7□□□□□ -1.98
SCARNA17.3-201ENST00000516381 GALR2O43603 387 aaPredicted RBP2.69□□□□□ -1.98
SCARNA17.3-201ENST00000516381 FAM163AQ96GL9 167 aaPredicted RBP2.69□□□□□ -1.98
SCARNA17.3-201ENST00000516381 PRR29P0C7W0 189 aa2.68□□□□□ -1.98
SCARNA17.3-201ENST00000516381 POTEJP0CG39 1038 aa2.68□□□□□ -1.98
SCARNA17.3-201ENST00000516381 ZNF579Q8NAF0 562 aaKnown RBP2.68□□□□□ -1.98
SCARNA17.3-201ENST00000516381 FARP1Q9Y4F1 1045 aaPredicted RBP2.68□□□□□ -1.98
SCARNA17.3-201ENST00000516381 CDAN1Q8IWY9 1227 aa2.67□□□□□ -1.98
SCARNA17.3-201ENST00000516381 PELP1Q8IZL8 1130 aaKnown RBP2.67□□□□□ -1.98
SCARNA17.3-201ENST00000516381 ZNF692Q9BU19 519 aaPredicted RBP2.66□□□□□ -1.98
SCARNA17.3-201ENST00000516381 ZRANB1Q9UGI0 708 aa2.66□□□□□ -1.98
SCARNA17.3-201ENST00000516381 SSUH2Q9Y2M2 353 aa2.66□□□□□ -1.98
SCARNA17.3-201ENST00000516381 FBLN2P98095 1184 aa2.64□□□□□ -1.99
SCARNA17.3-201ENST00000516381 METRNQ9UJH8 293 aa2.64□□□□□ -1.99
SCARNA17.3-201ENST00000516381 MMRN1Q13201 1228 aa2.63□□□□□ -1.99
SCARNA17.3-201ENST00000516381 MAMSTRQ6ZN01 415 aa2.63□□□□□ -1.99
SCARNA17.3-201ENST00000516381 PABPN1Q86U42 306 aaKnown RBP eCLIP2.62□□□□□ -1.99
SCARNA17.3-201ENST00000516381 MKRN4PQ13434 485 aaPredicted RBP2.61□□□□□ -1.99
SCARNA17.3-201ENST00000516381 SPNS2Q8IVW8 549 aa2.61□□□□□ -1.99
SCARNA17.3-201ENST00000516381 PHF12Q96QT6 1004 aa2.61□□□□□ -1.99
SCARNA17.3-201ENST00000516381 C7P10643 843 aa2.6□□□□□ -1.99
SCARNA17.3-201ENST00000516381 ASTLQ6HA08 431 aaPredicted RBP2.6□□□□□ -1.99
SCARNA17.3-201ENST00000516381 SLC39A7Q92504 469 aa2.6□□□□□ -1.99
SCARNA17.3-201ENST00000516381 SCUBE2Q9NQ36 999 aa2.6□□□□□ -1.99
SCARNA17.3-201ENST00000516381 ATMINO43313 823 aaPredicted RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms