RNA–Protein interactions for RNA: ENST00000516332.1

RNU6-65P-201, Transcript of RNA, U6 small nuclear 65, pseudogene, humanhuman

BASIC

Gene RNU6-65P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-65P-201ENST00000516332 AEBP2Q6ZN18 517 aaPredicted RBP16.09■□□□□ 0.17
RNU6-65P-201ENST00000516332 POTEDQ86YR6 584 aa15.71■□□□□ 0.11
RNU6-65P-201ENST00000516332 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
RNU6-65P-201ENST00000516332 SENP3Q9H4L4 574 aaPredicted RBP14.07□□□□□ -0.16
RNU6-65P-201ENST00000516332 PHF23Q9BUL5 403 aaPredicted RBP13.63□□□□□ -0.23
RNU6-65P-201ENST00000516332 FOXD1Q16676 465 aa13.29□□□□□ -0.28
RNU6-65P-201ENST00000516332 MSH5O43196 834 aa13.14□□□□□ -0.31
RNU6-65P-201ENST00000516332 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
RNU6-65P-201ENST00000516332 PIAS4Q8N2W9 510 aaPredicted RBP12.06□□□□□ -0.48
RNU6-65P-201ENST00000516332 POTEHQ6S545 545 aa12□□□□□ -0.49
RNU6-65P-201ENST00000516332 PPP6R1Q9UPN7 881 aa11.08□□□□□ -0.64
RNU6-65P-201ENST00000516332 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
RNU6-65P-201ENST00000516332 ADRA2BP18089 450 aa10.98□□□□□ -0.65
RNU6-65P-201ENST00000516332 DMRT2Q9Y5R5 561 aa10.85□□□□□ -0.67
RNU6-65P-201ENST00000516332 C1QBPQ07021 282 aaKnown RBP10.78□□□□□ -0.68
RNU6-65P-201ENST00000516332 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
RNU6-65P-201ENST00000516332 DCAF8L1A6NGE4 600 aa10.64□□□□□ -0.71
RNU6-65P-201ENST00000516332 MAPK8IP2Q13387 824 aaPredicted RBP10.6□□□□□ -0.71
RNU6-65P-201ENST00000516332 SP7Q8TDD2 431 aaPredicted RBP10.45□□□□□ -0.74
RNU6-65P-201ENST00000516332 PLPPR3Q6T4P5 718 aa10.17□□□□□ -0.78
RNU6-65P-201ENST00000516332 SCAF1Q9H7N4 1312 aaKnown RBP10.13□□□□□ -0.79
RNU6-65P-201ENST00000516332 CHRDL2Q6WN34 429 aa9.85□□□□□ -0.83
RNU6-65P-201ENST00000516332 LHX8Q68G74 356 aa9.79□□□□□ -0.84
RNU6-65P-201ENST00000516332 HOXD11P31277 338 aaPredicted RBP9.76□□□□□ -0.85
RNU6-65P-201ENST00000516332 DSG3P32926 999 aa9.74□□□□□ -0.85
RNU6-65P-201ENST00000516332 DNAJC5BQ9UF47 199 aa9.74□□□□□ -0.85
RNU6-65P-201ENST00000516332 HAX1O00165 279 aa9.61□□□□□ -0.87
RNU6-65P-201ENST00000516332 CAPN15O75808 1086 aa9.48□□□□□ -0.89
RNU6-65P-201ENST00000516332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.41□□□□□ -0.9
RNU6-65P-201ENST00000516332 RBM42Q9BTD8 480 aaKnown RBP9.4□□□□□ -0.9
RNU6-65P-201ENST00000516332 POTEMA6NI47 508 aa9.34□□□□□ -0.91
RNU6-65P-201ENST00000516332 SPINK5Q9NQ38 1064 aaPredicted RBP9.34□□□□□ -0.91
RNU6-65P-201ENST00000516332 EVX2Q03828 476 aa9.26□□□□□ -0.93
RNU6-65P-201ENST00000516332 RNF216Q9NWF9 866 aaPredicted RBP9.26□□□□□ -0.93
RNU6-65P-201ENST00000516332 PCDH10Q9P2E7 1040 aa9.25□□□□□ -0.93
RNU6-65P-201ENST00000516332 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
RNU6-65P-201ENST00000516332 POTEGQ6S5H5 508 aa9.22□□□□□ -0.93
RNU6-65P-201ENST00000516332 ABCB7O75027 752 aa9.08□□□□□ -0.96
RNU6-65P-201ENST00000516332 GABBR2O75899 941 aa8.98□□□□□ -0.97
RNU6-65P-201ENST00000516332 TRHP20396 242 aaPredicted RBP8.92□□□□□ -0.98
RNU6-65P-201ENST00000516332 CNKSR2Q8WXI2 1034 aa8.92□□□□□ -0.98
RNU6-65P-201ENST00000516332 U3KPZ7 1027 aaPredicted RBP8.92□□□□□ -0.98
RNU6-65P-201ENST00000516332 FXR2P51116 673 aaKnown RBP eCLIP8.87□□□□□ -0.99
RNU6-65P-201ENST00000516332 ZNF219Q9P2Y4 722 aaPredicted RBP8.8□□□□□ -1
RNU6-65P-201ENST00000516332 AKT1S1Q96B36 256 aa8.79□□□□□ -1
RNU6-65P-201ENST00000516332 OTUD5Q96G74 571 aa8.76□□□□□ -1.01
RNU6-65P-201ENST00000516332 POTEIP0CG38 1075 aa8.73□□□□□ -1.01
RNU6-65P-201ENST00000516332 REM2Q8IYK8 340 aaPredicted RBP8.7□□□□□ -1.02
RNU6-65P-201ENST00000516332 PPP4R3CPQ6ZMV5 832 aa8.68□□□□□ -1.02
RNU6-65P-201ENST00000516332 C19orf67A6NJJ6 358 aa8.65□□□□□ -1.02
RNU6-65P-201ENST00000516332 PITPNM1O00562 1244 aa8.63□□□□□ -1.03
RNU6-65P-201ENST00000516332 APLP2Q06481 763 aa8.59□□□□□ -1.03
RNU6-65P-201ENST00000516332 CDAN1Q8IWY9 1227 aa8.49□□□□□ -1.05
RNU6-65P-201ENST00000516332 FAM163AQ96GL9 167 aaPredicted RBP8.47□□□□□ -1.05
RNU6-65P-201ENST00000516332 MMRN1Q13201 1228 aa8.46□□□□□ -1.06
RNU6-65P-201ENST00000516332 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.06
RNU6-65P-201ENST00000516332 DCBLD2Q96PD2 775 aa8.46□□□□□ -1.06
RNU6-65P-201ENST00000516332 PRKAR2AP13861 404 aaKnown RBP8.43□□□□□ -1.06
RNU6-65P-201ENST00000516332 POTEB2H3BUK9 544 aa8.42□□□□□ -1.06
RNU6-65P-201ENST00000516332 SPNS2Q8IVW8 549 aa8.28□□□□□ -1.08
RNU6-65P-201ENST00000516332 CLCN6P51797 869 aa8.27□□□□□ -1.09
RNU6-65P-201ENST00000516332 POLA2Q14181 598 aa8.26□□□□□ -1.09
RNU6-65P-201ENST00000516332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.15□□□□□ -1.1
RNU6-65P-201ENST00000516332 HNRNPUL2Q1KMD3 747 aaKnown RBP8.15□□□□□ -1.1
RNU6-65P-201ENST00000516332 MAMSTRQ6ZN01 415 aa8.11□□□□□ -1.11
RNU6-65P-201ENST00000516332 CD44P16070 742 aaKnown RBP8.05□□□□□ -1.12
RNU6-65P-201ENST00000516332 OSCARQ8IYS5 282 aa8.04□□□□□ -1.12
RNU6-65P-201ENST00000516332 SAMD1Q6SPF0 538 aaPredicted RBP8□□□□□ -1.13
RNU6-65P-201ENST00000516332 CLEC11AQ9Y240 323 aa8□□□□□ -1.13
RNU6-65P-201ENST00000516332 SCUBE2Q9NQ36 999 aa7.99□□□□□ -1.13
RNU6-65P-201ENST00000516332 POTEJP0CG39 1038 aa7.98□□□□□ -1.13
RNU6-65P-201ENST00000516332 CHADLQ6NUI6 762 aa7.96□□□□□ -1.14
RNU6-65P-201ENST00000516332 ZBTB12Q9Y330 459 aaPredicted RBP7.94□□□□□ -1.14
RNU6-65P-201ENST00000516332 NCBP3Q53F19 620 aaKnown RBP7.88□□□□□ -1.15
RNU6-65P-201ENST00000516332 GALR2O43603 387 aaPredicted RBP7.85□□□□□ -1.15
RNU6-65P-201ENST00000516332 SPDYE1Q8NFV5 336 aaPredicted RBP7.85□□□□□ -1.15
RNU6-65P-201ENST00000516332 METRNQ9UJH8 293 aa7.84□□□□□ -1.15
RNU6-65P-201ENST00000516332 PELP1Q8IZL8 1130 aaKnown RBP7.82□□□□□ -1.16
RNU6-65P-201ENST00000516332 ZNF579Q8NAF0 562 aaKnown RBP7.8□□□□□ -1.16
RNU6-65P-201ENST00000516332 ST18O60284 1047 aa7.78□□□□□ -1.16
RNU6-65P-201ENST00000516332 SLC4A2P04920 1241 aa7.76□□□□□ -1.17
RNU6-65P-201ENST00000516332 C7P10643 843 aa7.75□□□□□ -1.17
RNU6-65P-201ENST00000516332 SLC39A7Q92504 469 aa7.74□□□□□ -1.17
RNU6-65P-201ENST00000516332 NPM3O75607 178 aaKnown RBP7.69□□□□□ -1.18
RNU6-65P-201ENST00000516332 ZRANB1Q9UGI0 708 aa7.69□□□□□ -1.18
RNU6-65P-201ENST00000516332 FARP1Q9Y4F1 1045 aaPredicted RBP7.64□□□□□ -1.19
RNU6-65P-201ENST00000516332 PRR29P0C7W0 189 aa7.58□□□□□ -1.2
RNU6-65P-201ENST00000516332 TMEM121BQ9BXQ6 578 aaPredicted RBP7.55□□□□□ -1.2
RNU6-65P-201ENST00000516332 ASTLQ6HA08 431 aaPredicted RBP7.54□□□□□ -1.2
RNU6-65P-201ENST00000516332 SPDYE2BA6NHP3 402 aa7.53□□□□□ -1.2
RNU6-65P-201ENST00000516332 SPDYE6P0CI01 402 aa7.53□□□□□ -1.2
RNU6-65P-201ENST00000516332 SPDYE2Q495Y8 402 aa7.53□□□□□ -1.2
RNU6-65P-201ENST00000516332 RNF166Q96A37 237 aaPredicted RBP7.51□□□□□ -1.21
RNU6-65P-201ENST00000516332 ATMINO43313 823 aaPredicted RBP7.49□□□□□ -1.21
RNU6-65P-201ENST00000516332 MARVELD3Q96A59 401 aa7.49□□□□□ -1.21
RNU6-65P-201ENST00000516332 KRTAP3-3Q9BYR6 98 aa7.49□□□□□ -1.21
RNU6-65P-201ENST00000516332 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
RNU6-65P-201ENST00000516332 SLAIN1Q8ND83 568 aa7.44□□□□□ -1.22
RNU6-65P-201ENST00000516332 ATF5Q9Y2D1 282 aaPredicted RBP7.43□□□□□ -1.22
RNU6-65P-201ENST00000516332 PHF12Q96QT6 1004 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms