RNA–Protein interactions for RNA: ENST00000515913.1

RNU5E-3P-201, Transcript of RNA, U5E small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU5E-3P, Length 68 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5E-3P-201ENST00000515913 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
RNU5E-3P-201ENST00000515913 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
RNU5E-3P-201ENST00000515913 SENP3Q9H4L4 574 aaPredicted RBP13.72□□□□□ -0.21
RNU5E-3P-201ENST00000515913 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
RNU5E-3P-201ENST00000515913 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
RNU5E-3P-201ENST00000515913 FOXD1Q16676 465 aa12.86□□□□□ -0.35
RNU5E-3P-201ENST00000515913 MSH5O43196 834 aa12.27□□□□□ -0.45
RNU5E-3P-201ENST00000515913 PIAS4Q8N2W9 510 aaPredicted RBP11.83□□□□□ -0.52
RNU5E-3P-201ENST00000515913 PPP6R1Q9UPN7 881 aa11.56□□□□□ -0.56
RNU5E-3P-201ENST00000515913 ADRA2BP18089 450 aa11.45□□□□□ -0.58
RNU5E-3P-201ENST00000515913 PLPPR3Q6T4P5 718 aa11.35□□□□□ -0.59
RNU5E-3P-201ENST00000515913 CACNB1Q02641 598 aaPredicted RBP10.85□□□□□ -0.67
RNU5E-3P-201ENST00000515913 DMRT2Q9Y5R5 561 aa10.8□□□□□ -0.68
RNU5E-3P-201ENST00000515913 MAPK8IP2Q13387 824 aaPredicted RBP10.7□□□□□ -0.7
RNU5E-3P-201ENST00000515913 SCAF1Q9H7N4 1312 aaKnown RBP10.48□□□□□ -0.73
RNU5E-3P-201ENST00000515913 RNF39Q9H2S5 420 aa10.43□□□□□ -0.74
RNU5E-3P-201ENST00000515913 DCAF8L1A6NGE4 600 aa10.27□□□□□ -0.77
RNU5E-3P-201ENST00000515913 C1QBPQ07021 282 aaKnown RBP10.24□□□□□ -0.77
RNU5E-3P-201ENST00000515913 HOXD11P31277 338 aaPredicted RBP10.18□□□□□ -0.78
RNU5E-3P-201ENST00000515913 POTEHQ6S545 545 aa10.07□□□□□ -0.8
RNU5E-3P-201ENST00000515913 DNAJC5BQ9UF47 199 aa10□□□□□ -0.81
RNU5E-3P-201ENST00000515913 RNF216Q9NWF9 866 aaPredicted RBP9.91□□□□□ -0.82
RNU5E-3P-201ENST00000515913 PPP4R3CPQ6ZMV5 832 aa9.86□□□□□ -0.83
RNU5E-3P-201ENST00000515913 CNKSR2Q8WXI2 1034 aa9.83□□□□□ -0.84
RNU5E-3P-201ENST00000515913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.61□□□□□ -0.87
RNU5E-3P-201ENST00000515913 DSG3P32926 999 aa9.55□□□□□ -0.88
RNU5E-3P-201ENST00000515913 SPINK5Q9NQ38 1064 aaPredicted RBP9.42□□□□□ -0.9
RNU5E-3P-201ENST00000515913 CAPN15O75808 1086 aa9.39□□□□□ -0.91
RNU5E-3P-201ENST00000515913 U3KPZ7 1027 aaPredicted RBP9.38□□□□□ -0.91
RNU5E-3P-201ENST00000515913 NCBP3Q53F19 620 aaKnown RBP9.28□□□□□ -0.92
RNU5E-3P-201ENST00000515913 NPM3O75607 178 aaKnown RBP9.18□□□□□ -0.94
RNU5E-3P-201ENST00000515913 CHRDL2Q6WN34 429 aa9.16□□□□□ -0.94
RNU5E-3P-201ENST00000515913 SP7Q8TDD2 431 aaPredicted RBP9.16□□□□□ -0.94
RNU5E-3P-201ENST00000515913 RBM42Q9BTD8 480 aaKnown RBP9.12□□□□□ -0.95
RNU5E-3P-201ENST00000515913 ABCB7O75027 752 aa9.11□□□□□ -0.95
RNU5E-3P-201ENST00000515913 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
RNU5E-3P-201ENST00000515913 TRHP20396 242 aaPredicted RBP9.08□□□□□ -0.96
RNU5E-3P-201ENST00000515913 APLP2Q06481 763 aa9.04□□□□□ -0.96
RNU5E-3P-201ENST00000515913 SLC4A2P04920 1241 aa8.94□□□□□ -0.98
RNU5E-3P-201ENST00000515913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.9□□□□□ -0.98
RNU5E-3P-201ENST00000515913 HNRNPUL2Q1KMD3 747 aaKnown RBP8.9□□□□□ -0.98
RNU5E-3P-201ENST00000515913 SAMD1Q6SPF0 538 aaPredicted RBP8.82□□□□□ -1
RNU5E-3P-201ENST00000515913 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
RNU5E-3P-201ENST00000515913 AKT1S1Q96B36 256 aa8.79□□□□□ -1
RNU5E-3P-201ENST00000515913 HAX1O00165 279 aa8.77□□□□□ -1.01
RNU5E-3P-201ENST00000515913 POLA2Q14181 598 aa8.74□□□□□ -1.01
RNU5E-3P-201ENST00000515913 REM2Q8IYK8 340 aaPredicted RBP8.69□□□□□ -1.02
RNU5E-3P-201ENST00000515913 FXR2P51116 673 aaKnown RBP eCLIP8.68□□□□□ -1.02
RNU5E-3P-201ENST00000515913 EVX2Q03828 476 aa8.67□□□□□ -1.02
RNU5E-3P-201ENST00000515913 PITPNM1O00562 1244 aa8.6□□□□□ -1.03
RNU5E-3P-201ENST00000515913 LHX8Q68G74 356 aa8.56□□□□□ -1.04
RNU5E-3P-201ENST00000515913 ZBTB12Q9Y330 459 aaPredicted RBP8.54□□□□□ -1.04
RNU5E-3P-201ENST00000515913 MYCNP04198 464 aaPredicted RBP8.5□□□□□ -1.05
RNU5E-3P-201ENST00000515913 OSCARQ8IYS5 282 aa8.48□□□□□ -1.05
RNU5E-3P-201ENST00000515913 PLSCR2Q9NRY7 297 aa8.47□□□□□ -1.05
RNU5E-3P-201ENST00000515913 KCNA4P22459 653 aa8.44□□□□□ -1.06
RNU5E-3P-201ENST00000515913 C19orf67A6NJJ6 358 aa8.42□□□□□ -1.06
RNU5E-3P-201ENST00000515913 GABBR2O75899 941 aa8.42□□□□□ -1.06
RNU5E-3P-201ENST00000515913 PRKAR2AP13861 404 aaKnown RBP8.36□□□□□ -1.07
RNU5E-3P-201ENST00000515913 ATF5Q9Y2D1 282 aaPredicted RBP8.35□□□□□ -1.07
RNU5E-3P-201ENST00000515913 POTEIP0CG38 1075 aa8.26□□□□□ -1.09
RNU5E-3P-201ENST00000515913 SPDYE2BA6NHP3 402 aa8.23□□□□□ -1.09
RNU5E-3P-201ENST00000515913 SPDYE6P0CI01 402 aa8.23□□□□□ -1.09
RNU5E-3P-201ENST00000515913 SPDYE2Q495Y8 402 aa8.23□□□□□ -1.09
RNU5E-3P-201ENST00000515913 SPDYE1Q8NFV5 336 aaPredicted RBP8.22□□□□□ -1.09
RNU5E-3P-201ENST00000515913 CLEC11AQ9Y240 323 aa8.18□□□□□ -1.1
RNU5E-3P-201ENST00000515913 CLCN6P51797 869 aa8.13□□□□□ -1.11
RNU5E-3P-201ENST00000515913 CHADLQ6NUI6 762 aa8.11□□□□□ -1.11
RNU5E-3P-201ENST00000515913 POTEMA6NI47 508 aa8.08□□□□□ -1.12
RNU5E-3P-201ENST00000515913 OTUD5Q96G74 571 aa8.07□□□□□ -1.12
RNU5E-3P-201ENST00000515913 FOXD4L1Q9NU39 408 aa8.07□□□□□ -1.12
RNU5E-3P-201ENST00000515913 SSUH2Q9Y2M2 353 aa8.07□□□□□ -1.12
RNU5E-3P-201ENST00000515913 CD44P16070 742 aaKnown RBP8.05□□□□□ -1.12
RNU5E-3P-201ENST00000515913 POTEGQ6S5H5 508 aa8.04□□□□□ -1.12
RNU5E-3P-201ENST00000515913 PCDH10Q9P2E7 1040 aa8.04□□□□□ -1.12
RNU5E-3P-201ENST00000515913 FBLN2P98095 1184 aa8.03□□□□□ -1.12
RNU5E-3P-201ENST00000515913 DCBLD2Q96PD2 775 aa8.03□□□□□ -1.12
RNU5E-3P-201ENST00000515913 ZNF692Q9BU19 519 aaPredicted RBP7.99□□□□□ -1.13
RNU5E-3P-201ENST00000515913 PRR29P0C7W0 189 aa7.98□□□□□ -1.13
RNU5E-3P-201ENST00000515913 POTEB2H3BUK9 544 aa7.97□□□□□ -1.13
RNU5E-3P-201ENST00000515913 FARP1Q9Y4F1 1045 aaPredicted RBP7.96□□□□□ -1.14
RNU5E-3P-201ENST00000515913 MKRN4PQ13434 485 aaPredicted RBP7.95□□□□□ -1.14
RNU5E-3P-201ENST00000515913 ZNF579Q8NAF0 562 aaKnown RBP7.94□□□□□ -1.14
RNU5E-3P-201ENST00000515913 ATXN8OSP0DMR3 200 aa7.93□□□□□ -1.14
RNU5E-3P-201ENST00000515913 PABPN1Q86U42 306 aaKnown RBP eCLIP7.86□□□□□ -1.15
RNU5E-3P-201ENST00000515913 GALR2O43603 387 aaPredicted RBP7.85□□□□□ -1.15
RNU5E-3P-201ENST00000515913 LCE2DQ5TA82 110 aaPredicted RBP7.84□□□□□ -1.15
RNU5E-3P-201ENST00000515913 ZRANB1Q9UGI0 708 aa7.83□□□□□ -1.16
RNU5E-3P-201ENST00000515913 SLC4A1APQ9BWU0 796 aaKnown RBP7.82□□□□□ -1.16
RNU5E-3P-201ENST00000515913 POTEJP0CG39 1038 aa7.78□□□□□ -1.16
RNU5E-3P-201ENST00000515913 ZBTB22O15209 634 aa7.77□□□□□ -1.17
RNU5E-3P-201ENST00000515913 PELP1Q8IZL8 1130 aaKnown RBP7.77□□□□□ -1.17
RNU5E-3P-201ENST00000515913 MAMSTRQ6ZN01 415 aa7.72□□□□□ -1.17
RNU5E-3P-201ENST00000515913 FAM163AQ96GL9 167 aaPredicted RBP7.7□□□□□ -1.18
RNU5E-3P-201ENST00000515913 METRNQ9UJH8 293 aa7.7□□□□□ -1.18
RNU5E-3P-201ENST00000515913 C7P10643 843 aa7.69□□□□□ -1.18
RNU5E-3P-201ENST00000515913 ASTLQ6HA08 431 aaPredicted RBP7.69□□□□□ -1.18
RNU5E-3P-201ENST00000515913 CREBZFQ9NS37 354 aa7.68□□□□□ -1.18
RNU5E-3P-201ENST00000515913 SLC39A7Q92504 469 aa7.67□□□□□ -1.18
RNU5E-3P-201ENST00000515913 PHF12Q96QT6 1004 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms