RNA–Protein interactions for RNA: ENST00000515773.5

CUL9-218, Transcript of cullin 9, humanhuman

TSL 2

Gene CUL9, Length 8,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9-218ENST00000515773 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
CUL9-218ENST00000515773 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
CUL9-218ENST00000515773 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
CUL9-218ENST00000515773 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
CUL9-218ENST00000515773 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
CUL9-218ENST00000515773 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
CUL9-218ENST00000515773 PELP1Q8IZL8 1130 aaKnown RBP17.5■□□□□ 0.39
CUL9-218ENST00000515773 APLP2Q06481 763 aa17.46■□□□□ 0.39
CUL9-218ENST00000515773 FAM9AQ8IZU1 332 aaPredicted RBP17.41■□□□□ 0.38
CUL9-218ENST00000515773 ZEB1P37275 1124 aaPredicted RBP17.29■□□□□ 0.36
CUL9-218ENST00000515773 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
CUL9-218ENST00000515773 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
CUL9-218ENST00000515773 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
CUL9-218ENST00000515773 CENPBP07199 599 aaPredicted RBP17.1■□□□□ 0.33
CUL9-218ENST00000515773 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.31
CUL9-218ENST00000515773 UBTFP17480 764 aaKnown RBP16.94■□□□□ 0.3
CUL9-218ENST00000515773 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
CUL9-218ENST00000515773 HRCP23327 699 aa16.82■□□□□ 0.28
CUL9-218ENST00000515773 ATP1B4Q9UN42 357 aaPredicted RBP16.76■□□□□ 0.27
CUL9-218ENST00000515773 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
CUL9-218ENST00000515773 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
CUL9-218ENST00000515773 ERICH6Q7L0X2 663 aa16.69■□□□□ 0.26
CUL9-218ENST00000515773 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
CUL9-218ENST00000515773 LOC105371045A0A1W2PR82 267 aa16.67■□□□□ 0.26
CUL9-218ENST00000515773 NEFLP07196 543 aa16.6■□□□□ 0.25
CUL9-218ENST00000515773 MYT1Q01538 1121 aa16.58■□□□□ 0.24
CUL9-218ENST00000515773 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
CUL9-218ENST00000515773 ITGAEP38570 1179 aa16.34■□□□□ 0.21
CUL9-218ENST00000515773 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
CUL9-218ENST00000515773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
CUL9-218ENST00000515773 DIEXFQ68CQ4 756 aaKnown RBP16.27■□□□□ 0.2
CUL9-218ENST00000515773 ABCC9O60706 1549 aa16.27■□□□□ 0.2
CUL9-218ENST00000515773 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.18
CUL9-218ENST00000515773 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
CUL9-218ENST00000515773 POLR3GLQ9BT43 218 aa16.08■□□□□ 0.16
CUL9-218ENST00000515773 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
CUL9-218ENST00000515773 FAM50AQ14320 339 aaKnown RBP16.01■□□□□ 0.15
CUL9-218ENST00000515773 DAXXQ9UER7 740 aaPredicted RBP16.01■□□□□ 0.15
CUL9-218ENST00000515773 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.151e-7■■■□□ 15.6
CUL9-218ENST00000515773 MYT1LQ9UL68 1186 aa15.93■□□□□ 0.14
CUL9-218ENST00000515773 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
CUL9-218ENST00000515773 CNGB1Q14028 1251 aaPredicted RBP15.91■□□□□ 0.14
CUL9-218ENST00000515773 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.13
CUL9-218ENST00000515773 NEUROD1Q13562 356 aa15.88■□□□□ 0.13
CUL9-218ENST00000515773 TRIM52Q96A61 297 aa15.82■□□□□ 0.12
CUL9-218ENST00000515773 ANP32CO43423 234 aa15.81■□□□□ 0.12
CUL9-218ENST00000515773 CSRNP3Q8WYN3 585 aa15.79■□□□□ 0.12
CUL9-218ENST00000515773 ACIN1Q9UKV3 1341 aaKnown RBP15.77■□□□□ 0.11
CUL9-218ENST00000515773 MYO15BQ96JP2 1530 aa15.75■□□□□ 0.11
CUL9-218ENST00000515773 RTL5Q5HYW3 569 aaPredicted RBP15.73■□□□□ 0.11
CUL9-218ENST00000515773 BCANQ96GW7 911 aa15.7■□□□□ 0.1
CUL9-218ENST00000515773 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
CUL9-218ENST00000515773 CDK11AQ9UQ88 783 aaPredicted RBP15.66■□□□□ 0.1
CUL9-218ENST00000515773 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
CUL9-218ENST00000515773 CLSPNQ9HAW4 1339 aa15.65■□□□□ 0.1
CUL9-218ENST00000515773 ZNF326Q5BKZ1 582 aaKnown RBP15.6■□□□□ 0.09
CUL9-218ENST00000515773 P3H3Q8IVL6 736 aa15.58■□□□□ 0.08
CUL9-218ENST00000515773 NACADO15069 1562 aa15.57■□□□□ 0.08
CUL9-218ENST00000515773 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
CUL9-218ENST00000515773 TONSLQ96HA7 1378 aa15.49■□□□□ 0.07
CUL9-218ENST00000515773 FBLN2P98095 1184 aa15.48■□□□□ 0.07
CUL9-218ENST00000515773 GOLGA3Q08378 1498 aa15.45■□□□□ 0.06
CUL9-218ENST00000515773 CLIP1P30622 1438 aa15.44■□□□□ 0.06
CUL9-218ENST00000515773 EEA1Q15075 1411 aa15.44■□□□□ 0.06
CUL9-218ENST00000515773 CEP162Q5TB80 1403 aa15.42■□□□□ 0.06
CUL9-218ENST00000515773 ARID3CA6NKF2 412 aa15.42■□□□□ 0.06
CUL9-218ENST00000515773 ANP32AP39687 249 aaKnown RBP15.39■□□□□ 0.05
CUL9-218ENST00000515773 FKBP8Q14318 412 aa15.39■□□□□ 0.05
CUL9-218ENST00000515773 CANXP27824 592 aaKnown RBP15.37■□□□□ 0.05
CUL9-218ENST00000515773 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
CUL9-218ENST00000515773 ZNF777Q9ULD5 760 aaPredicted RBP15.36■□□□□ 0.05
CUL9-218ENST00000515773 DDX10Q13206 875 aaKnown RBP15.35■□□□□ 0.05
CUL9-218ENST00000515773 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
CUL9-218ENST00000515773 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
CUL9-218ENST00000515773 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
CUL9-218ENST00000515773 BAZ1BQ9UIG0 1483 aaKnown RBP15.29■□□□□ 0.04
CUL9-218ENST00000515773 CEP164Q9UPV0 1460 aa15.29■□□□□ 0.04
CUL9-218ENST00000515773 MIER1Q8N108 512 aa15.28■□□□□ 0.04
CUL9-218ENST00000515773 WRNQ14191 1432 aaPredicted RBP eCLIP15.28■□□□□ 0.04
CUL9-218ENST00000515773 MTUS2Q5JR59 1369 aa15.26■□□□□ 0.03
CUL9-218ENST00000515773 TNIKQ9UKE5 1360 aa15.24■□□□□ 0.03
CUL9-218ENST00000515773 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
CUL9-218ENST00000515773 NEFMP07197 916 aa15.23■□□□□ 0.03
CUL9-218ENST00000515773 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
CUL9-218ENST00000515773 CHIC2Q9UKJ5 165 aa15.2■□□□□ 0.02
CUL9-218ENST00000515773 WIZO95785 1651 aa15.18■□□□□ 0.02
CUL9-218ENST00000515773 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
CUL9-218ENST00000515773 TMC1Q8TDI8 760 aa15.16■□□□□ 0.02
CUL9-218ENST00000515773 ABCC8Q09428 1581 aa15.13■□□□□ 0.01
CUL9-218ENST00000515773 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
CUL9-218ENST00000515773 CCDC136Q96JN2 1154 aa15.12■□□□□ 0.01
CUL9-218ENST00000515773 MRS2Q9HD23 443 aa15.11■□□□□ 0.01
CUL9-218ENST00000515773 BCL11AQ9H165 835 aa15.11■□□□□ 0.01
CUL9-218ENST00000515773 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
CUL9-218ENST00000515773 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
CUL9-218ENST00000515773 EIF4G2P78344 907 aaKnown RBP eCLIP15.09■□□□□ 0.01
CUL9-218ENST00000515773 MROH2BQ7Z745 1585 aa15.07■□□□□ 0
CUL9-218ENST00000515773 UPF2Q9HAU5 1272 aaKnown RBP15.07■□□□□ 0
CUL9-218ENST00000515773 SALL2Q9Y467 1007 aaPredicted RBP15.07■□□□□ 0
CUL9-218ENST00000515773 TSPY4P0CV99 314 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms