RNA–Protein interactions for RNA: ENST00000515600.1

FAM13A-222, Transcript of family with sequence similarity 13 member A, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene FAM13A, Length 2,206 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-222ENST00000515600 NISCHQ9Y2I1 1504 aa22.02■■□□□ 1.12
FAM13A-222ENST00000515600 CCDC180Q9P1Z9 1646 aa19.13■□□□□ 0.65
FAM13A-222ENST00000515600 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
FAM13A-222ENST00000515600 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
FAM13A-222ENST00000515600 ABCC9O60706 1549 aa18.23■□□□□ 0.51
FAM13A-222ENST00000515600 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
FAM13A-222ENST00000515600 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
FAM13A-222ENST00000515600 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
FAM13A-222ENST00000515600 NACADO15069 1562 aa17.88■□□□□ 0.45
FAM13A-222ENST00000515600 RB1CC1Q8TDY2 1594 aa17.73■□□□□ 0.43
FAM13A-222ENST00000515600 SCRIBQ14160 1630 aa17.64■□□□□ 0.41
FAM13A-222ENST00000515600 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
FAM13A-222ENST00000515600 UNC13AQ9UPW8 1703 aa17.32■□□□□ 0.36
FAM13A-222ENST00000515600 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
FAM13A-222ENST00000515600 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.34
FAM13A-222ENST00000515600 CECR2Q9BXF3 1484 aa17.14■□□□□ 0.33
FAM13A-222ENST00000515600 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
FAM13A-222ENST00000515600 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.32
FAM13A-222ENST00000515600 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
FAM13A-222ENST00000515600 SMARCA4P51532 1647 aa16.9■□□□□ 0.3
FAM13A-222ENST00000515600 WIZO95785 1651 aa16.85■□□□□ 0.29
FAM13A-222ENST00000515600 EIF4G1Q04637 1599 aaKnown RBP16.7■□□□□ 0.26
FAM13A-222ENST00000515600 PEG3Q9GZU2 1588 aa16.69■□□□□ 0.26
FAM13A-222ENST00000515600 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
FAM13A-222ENST00000515600 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
FAM13A-222ENST00000515600 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
FAM13A-222ENST00000515600 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
FAM13A-222ENST00000515600 CHIC1Q5VXU3 224 aa16.56■□□□□ 0.24
FAM13A-222ENST00000515600 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
FAM13A-222ENST00000515600 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
FAM13A-222ENST00000515600 HMGXB3Q12766 1538 aa16.46■□□□□ 0.23
FAM13A-222ENST00000515600 CC2D2AQ9P2K1 1620 aa16.46■□□□□ 0.22
FAM13A-222ENST00000515600 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
FAM13A-222ENST00000515600 DNAJC5BQ9UF47 199 aa16.17■□□□□ 0.18
FAM13A-222ENST00000515600 CFTRP13569 1480 aa16.16■□□□□ 0.18
FAM13A-222ENST00000515600 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
FAM13A-222ENST00000515600 CADPSQ9ULU8 1353 aa16.14■□□□□ 0.17
FAM13A-222ENST00000515600 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
FAM13A-222ENST00000515600 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
FAM13A-222ENST00000515600 NESP48681 1621 aa15.99■□□□□ 0.15
FAM13A-222ENST00000515600 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
FAM13A-222ENST00000515600 PRDM2Q13029 1718 aa15.96■□□□□ 0.15
FAM13A-222ENST00000515600 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
FAM13A-222ENST00000515600 LAMC3Q9Y6N6 1575 aa15.94■□□□□ 0.14
FAM13A-222ENST00000515600 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
FAM13A-222ENST00000515600 TOP2BQ02880 1626 aa15.92■□□□□ 0.14
FAM13A-222ENST00000515600 CUX1P39880 1505 aa15.91■□□□□ 0.14
FAM13A-222ENST00000515600 SOGA1O94964 1423 aa15.89■□□□□ 0.13
FAM13A-222ENST00000515600 PDS5BQ9NTI5 1447 aa15.87■□□□□ 0.13
FAM13A-222ENST00000515600 BIVM-ERCC5R4GMW8 1640 aa15.87■□□□□ 0.13
FAM13A-222ENST00000515600 RUSC2Q8N2Y8 1516 aa15.83■□□□□ 0.13
FAM13A-222ENST00000515600 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.12
FAM13A-222ENST00000515600 EEA1Q15075 1411 aa15.82■□□□□ 0.12
FAM13A-222ENST00000515600 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
FAM13A-222ENST00000515600 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
FAM13A-222ENST00000515600 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
FAM13A-222ENST00000515600 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
FAM13A-222ENST00000515600 FGD5Q6ZNL6 1462 aa15.74■□□□□ 0.11
FAM13A-222ENST00000515600 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
FAM13A-222ENST00000515600 KIF21AQ7Z4S6 1674 aa15.72■□□□□ 0.11
FAM13A-222ENST00000515600 KIF27Q86VH2 1401 aa15.69■□□□□ 0.1
FAM13A-222ENST00000515600 POLA1P09884 1462 aaPredicted RBP15.68■□□□□ 0.1
FAM13A-222ENST00000515600 CUX2O14529 1486 aa15.65■□□□□ 0.1
FAM13A-222ENST00000515600 RAD54L2Q9Y4B4 1467 aa15.64■□□□□ 0.09
FAM13A-222ENST00000515600 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
FAM13A-222ENST00000515600 ERCC6Q03468 1493 aa15.63■□□□□ 0.09
FAM13A-222ENST00000515600 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
FAM13A-222ENST00000515600 GOLGA3Q08378 1498 aa15.6■□□□□ 0.09
FAM13A-222ENST00000515600 ABCA10Q8WWZ4 1543 aa15.59■□□□□ 0.09
FAM13A-222ENST00000515600 IGF1RP08069 1367 aa15.58■□□□□ 0.09
FAM13A-222ENST00000515600 KIF21BO75037 1637 aa15.58■□□□□ 0.08
FAM13A-222ENST00000515600 TNIKQ9UKE5 1360 aa15.57■□□□□ 0.08
FAM13A-222ENST00000515600 PRXQ9BXM0 1461 aa15.56■□□□□ 0.08
FAM13A-222ENST00000515600 RAPGEF2Q9Y4G8 1499 aa15.55■□□□□ 0.08
FAM13A-222ENST00000515600 WDR62O43379 1518 aa15.54■□□□□ 0.08
FAM13A-222ENST00000515600 TDRD9Q8NDG6 1382 aaKnown RBP15.53■□□□□ 0.08
FAM13A-222ENST00000515600 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
FAM13A-222ENST00000515600 ERICH3Q5RHP9 1530 aa15.49■□□□□ 0.07
FAM13A-222ENST00000515600 TARBP1Q13395 1621 aaKnown RBP15.49■□□□□ 0.07
FAM13A-222ENST00000515600 CEP162Q5TB80 1403 aa15.48■□□□□ 0.07
FAM13A-222ENST00000515600 WDR97A6NE52 1622 aa15.48■□□□□ 0.07
FAM13A-222ENST00000515600 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
FAM13A-222ENST00000515600 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.07
FAM13A-222ENST00000515600 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
FAM13A-222ENST00000515600 ABCA5Q8WWZ7 1642 aa15.44■□□□□ 0.06
FAM13A-222ENST00000515600 AQRO60306 1485 aaKnown RBP eCLIP15.42■□□□□ 0.06
FAM13A-222ENST00000515600 ZNF608Q9ULD9 1512 aaPredicted RBP15.39■□□□□ 0.05
FAM13A-222ENST00000515600 RANGAP1P46060 587 aaPredicted RBP15.39■□□□□ 0.05
FAM13A-222ENST00000515600 CLIP1P30622 1438 aa15.37■□□□□ 0.05
FAM13A-222ENST00000515600 CUL7Q14999 1698 aa15.36■□□□□ 0.05
FAM13A-222ENST00000515600 GRIN2BQ13224 1484 aa15.34■□□□□ 0.05
FAM13A-222ENST00000515600 HRCP23327 699 aa15.34■□□□□ 0.05
FAM13A-222ENST00000515600 PELP1Q8IZL8 1130 aaKnown RBP15.33■□□□□ 0.04
FAM13A-222ENST00000515600 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
FAM13A-222ENST00000515600 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
FAM13A-222ENST00000515600 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
FAM13A-222ENST00000515600 ADAMTS12P58397 1594 aa15.23■□□□□ 0.03
FAM13A-222ENST00000515600 SNAPC4Q5SXM2 1469 aa15.23■□□□□ 0.03
FAM13A-222ENST00000515600 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
FAM13A-222ENST00000515600 VPS8Q8N3P4 1428 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms