RNA–Protein interactions for RNA: ENST00000514318.1

RACK1-232, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-232ENST00000514318 GPKOWQ92917 476 aaPredicted RBP eCLIP18.74■□□□□ 0.593e-11■■■■□ 24.7
RACK1-232ENST00000514318 EFTUD2Q15029 972 aaKnown RBP eCLIP14.94□□□□□ -0.021e-24■■■■□ 23.3
RACK1-232ENST00000514318 NOLC1Q14978 699 aaKnown RBP eCLIP17.64■□□□□ 0.411e-323■■■■□ 22.8
RACK1-232ENST00000514318 AQRO60306 1485 aaKnown RBP eCLIP29.84■■■□□ 2.373e-31■■■■□ 22.5
RACK1-232ENST00000514318 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.12■□□□□ 0.011e-9■■■■□ 21
RACK1-232ENST00000514318 AATFQ9NY61 560 aaKnown RBP eCLIP19.85■□□□□ 0.771e-323■■■■□ 20.9
RACK1-232ENST00000514318 METAP2P50579 478 aaKnown RBP eCLIP18.3■□□□□ 0.526e-16■■■□□ 17.5
RACK1-232ENST00000514318 HNRNPMP52272 730 aaKnown RBP eCLIP26.22■■□□□ 1.792e-9■■■□□ 17.5
RACK1-232ENST00000514318 RBM22Q9NW64 420 aaKnown RBP eCLIP15.98■□□□□ 0.157e-9■■■□□ 15.8
RACK1-232ENST00000514318 DDX3XO00571 662 aaKnown RBP eCLIP16.06■□□□□ 0.163e-50■■■□□ 15.1
RACK1-232ENST00000514318 RPS3P23396 243 aaKnown RBP eCLIP15.38■□□□□ 0.057e-19■■■□□ 14.6
RACK1-232ENST00000514318 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.42□□□□□ -0.17e-45■■□□□ 13.1
RACK1-232ENST00000514318 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.08■■□□□ 1.931e-34■■□□□ 13
RACK1-232ENST00000514318 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.34■□□□□ 0.691e-7■■□□□ 11.9
RACK1-232ENST00000514318 PABPC4Q13310 644 aaKnown RBP eCLIP19.87■□□□□ 0.771e-82■■□□□ 11.8
RACK1-232ENST00000514318 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.14□□□□□ -0.151e-11■■□□□ 11.8
RACK1-232ENST00000514318 RBM15Q96T37 977 aaKnown RBP eCLIP16.28■□□□□ 0.25e-7■■□□□ 11.8
RACK1-232ENST00000514318 LARP4Q71RC2 724 aaKnown RBP eCLIP14.59□□□□□ -0.075e-28■□□□□ 11.3
RACK1-232ENST00000514318 IGF2BP3O00425 579 aaKnown RBP eCLIP20.45■□□□□ 0.861e-6■□□□□ 11.1
RACK1-232ENST00000514318 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.83□□□□□ -0.21e-323■□□□□ 11
RACK1-232ENST00000514318 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.2■□□□□ 0.666e-8■□□□□ 10.7
RACK1-232ENST00000514318 YBX3P16989 372 aaKnown RBP eCLIP22.43■■□□□ 1.182e-60■□□□□ 10.7
RACK1-232ENST00000514318 TRA2AQ13595 282 aaKnown RBP eCLIP16.12■□□□□ 0.175e-50■□□□□ 10.6
RACK1-232ENST00000514318 SF3B4Q15427 424 aaKnown RBP eCLIP14.77□□□□□ -0.051e-6■□□□□ 9.8
RACK1-232ENST00000514318 SMNDC1O75940 238 aaKnown RBP eCLIP14.59□□□□□ -0.072e-83■□□□□ 9.1
RACK1-232ENST00000514318 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.31■□□□□ 0.685e-22■□□□□ 9
RACK1-232ENST00000514318 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.85□□□□□ -0.031e-7■□□□□ 8.6
RACK1-232ENST00000514318 KHSRPQ92945 711 aaKnown RBP eCLIP18.69■□□□□ 0.581e-7■□□□□ 8.1
Retrieved 28 of 28 RNA–protein pairs in 10.5 ms